| Definition | Bradyrhizobium sp. ORS278 chromosome, complete genome. |
|---|---|
| Accession | NC_009445 |
| Length | 7,456,587 |
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The map label for this gene is czcB [H]
Identifier: 146339657
GI number: 146339657
Start: 2849526
End: 2850773
Strand: Direct
Name: czcB [H]
Synonym: BRADO2650
Alternate gene names: 146339657
Gene position: 2849526-2850773 (Clockwise)
Preceding gene: 146339655
Following gene: 146339658
Centisome position: 38.21
GC content: 64.82
Gene sequence:
>1248_bases ATGGCGTCTGACACGAAACCTGTCCCGCAGTTGATCAGCACCAAGCGGCTGCTGATCGGCTTTGCCGTCCTGGCGCTCGC CGGAGCGGGGGCTTACGGCTATCGGCAATTCGGATCGGCGCCGGCCAAGGACAACATCGAGTTGTCCAGCCAGTCCAAGC GCAACGGCACCACCTTTACGCCATCGGCCGCGGAATGGGCGACACTGACGATCGAGCCGGTGTGTGAAAAGATATTCCGC GCCGAGCACATTACCGAGGGCAAGGTTGCCGTCGACGAGGACCGCTCGACCCCCGTGTTCTCGCCCTATGCCGGCCGGGT CACCAAGCTGCTGGCGCGCCCGGGCGAGACCGTCCGCCAGGGCCAGCCGCTGTTCGTGATCGAGGCGGCCGACACCGTGC AGGCGCAGAACGATTTCATCGCGGCCATCACCTCCATGAACAAGGCGAAGTCCGCGCTCGACCTCGCCGACATCCAATAC AAGCGGGCCAAGGATCTGTTCGAAGGCCGCGCCATCCCGCTGAAGGATTTCCAGCAGGCGGAGGCGACCTCCGTTCAGGC TCAGAATGACATGCGGTCGTCACAGACTGCGCTGGAAGCCGCGCGCAACAAGCTGCGCATTCTCGGCTTCACCGATGCCG CCATCGCCGATTTCCAGAACAAGGGCGTGATCGACCGCGAGATCACGATCTACGCGCCCATCGGCGGCACGGTCGTGCAG CGCAAGGTCGGACCGGGGCAGTACGTGAACTCCGGCGCAAGCGACCCGGTGTTCGTGATCGGCGATCTCTCCACCGTGTG GCTGACGGCCTTCGTCCGCGAGAGCGACGCCGCCCTGGTCAATATCGGCGAGGAGATCCTCGTCAATGTGCTGGCGCTGC CGGGCCGTCCGCTGAAGGCCAGCATCAACTACGTGGCGGCCTCGATCGATCCGGCCACCCGGCGCCTCCTGGTCCGCGCC ACCATCGACAACAAGGACGGCGTGCTGAAGCCCGAGATGTTCGCCAATGTCACGATCTATTCGCCGGGCGAGCAGCCCGC CGTCGCCGTGCCGCGGCAGGCTTTGATCTACGAAGGTAACGAGGTCCGCGTCTGGGTCGCACGTCCCGACAAGTCGATCG AGCTGCGCAAGATCAAGACGGGTCTCATCAATGGCGACCAGGTCGCGGTCGAGGGCAATCTGAGCGCGGGCGAGCAGATC GTGACCAAGGGCAGCCTGTTCATCGATCGGGCTGCCTCCGGTAGCTGA
Upstream 100 bases:
>100_bases GGAGTTGGGCGATTTTTAGGTTGTTTAAAGCTCCAGTTCCGCACTATTAGCGCAACGATGAGCCTGCCAATGCCGGAATC GTCGACGGATCACACGAGCC
Downstream 100 bases:
>100_bases ACGTGGTCCTCCTGCCTGCCGTGCTGAAAGCTCCGACCTGAATGGATCGTCTCGTCGCCATCGCCGTCCAGCGGCGCTTC CTGATGGTTGGAATGTTCGT
Product: putative signal peptide
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 415; Mature: 414
Protein sequence:
>415_residues MASDTKPVPQLISTKRLLIGFAVLALAGAGAYGYRQFGSAPAKDNIELSSQSKRNGTTFTPSAAEWATLTIEPVCEKIFR AEHITEGKVAVDEDRSTPVFSPYAGRVTKLLARPGETVRQGQPLFVIEAADTVQAQNDFIAAITSMNKAKSALDLADIQY KRAKDLFEGRAIPLKDFQQAEATSVQAQNDMRSSQTALEAARNKLRILGFTDAAIADFQNKGVIDREITIYAPIGGTVVQ RKVGPGQYVNSGASDPVFVIGDLSTVWLTAFVRESDAALVNIGEEILVNVLALPGRPLKASINYVAASIDPATRRLLVRA TIDNKDGVLKPEMFANVTIYSPGEQPAVAVPRQALIYEGNEVRVWVARPDKSIELRKIKTGLINGDQVAVEGNLSAGEQI VTKGSLFIDRAASGS
Sequences:
>Translated_415_residues MASDTKPVPQLISTKRLLIGFAVLALAGAGAYGYRQFGSAPAKDNIELSSQSKRNGTTFTPSAAEWATLTIEPVCEKIFR AEHITEGKVAVDEDRSTPVFSPYAGRVTKLLARPGETVRQGQPLFVIEAADTVQAQNDFIAAITSMNKAKSALDLADIQY KRAKDLFEGRAIPLKDFQQAEATSVQAQNDMRSSQTALEAARNKLRILGFTDAAIADFQNKGVIDREITIYAPIGGTVVQ RKVGPGQYVNSGASDPVFVIGDLSTVWLTAFVRESDAALVNIGEEILVNVLALPGRPLKASINYVAASIDPATRRLLVRA TIDNKDGVLKPEMFANVTIYSPGEQPAVAVPRQALIYEGNEVRVWVARPDKSIELRKIKTGLINGDQVAVEGNLSAGEQI VTKGSLFIDRAASGS >Mature_414_residues ASDTKPVPQLISTKRLLIGFAVLALAGAGAYGYRQFGSAPAKDNIELSSQSKRNGTTFTPSAAEWATLTIEPVCEKIFRA EHITEGKVAVDEDRSTPVFSPYAGRVTKLLARPGETVRQGQPLFVIEAADTVQAQNDFIAAITSMNKAKSALDLADIQYK RAKDLFEGRAIPLKDFQQAEATSVQAQNDMRSSQTALEAARNKLRILGFTDAAIADFQNKGVIDREITIYAPIGGTVVQR KVGPGQYVNSGASDPVFVIGDLSTVWLTAFVRESDAALVNIGEEILVNVLALPGRPLKASINYVAASIDPATRRLLVRAT IDNKDGVLKPEMFANVTIYSPGEQPAVAVPRQALIYEGNEVRVWVARPDKSIELRKIKTGLINGDQVAVEGNLSAGEQIV TKGSLFIDRAASGS
Specific function: CzcA and CzcB together would act in zinc efflux nearly as effectively as the complete czc efflux system (CzcABC). The CzcB protein is thought to funnel zinc cations to the CzcA transport protein [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family [H]
Homologues:
Organism=Escherichia coli, GI1786787, Length=250, Percent_Identity=28, Blast_Score=81, Evalue=1e-16, Organism=Escherichia coli, GI87082036, Length=193, Percent_Identity=28.4974093264249, Blast_Score=64, Evalue=2e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005695 - InterPro: IPR006143 [H]
Pfam domain/function: PF00529 HlyD [H]
EC number: NA
Molecular weight: Translated: 44614; Mature: 44483
Theoretical pI: Translated: 8.35; Mature: 8.35
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 1.2 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 1.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MASDTKPVPQLISTKRLLIGFAVLALAGAGAYGYRQFGSAPAKDNIELSSQSKRNGTTFT CCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHCCCCCCCCEEECCCCCCCCCEEC PSAAEWATLTIEPVCEKIFRAEHITEGKVAVDEDRSTPVFSPYAGRVTKLLARPGETVRQ CCCCCEEEEEHHHHHHHHHHHHCCCCCCEEEECCCCCCCCCCHHHHHHHHHHCCCHHHHC GQPLFVIEAADTVQAQNDFIAAITSMNKAKSALDLADIQYKRAKDLFEGRAIPLKDFQQA CCCEEEEECCCHHHCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHH EATSVQAQNDMRSSQTALEAARNKLRILGFTDAAIADFQNKGVIDREITIYAPIGGTVVQ HHHHHHHHHHHHHHHHHHHHHHCCEEEEEECHHHHHHHCCCCCEECEEEEEECCCCEEEE RKVGPGQYVNSGASDPVFVIGDLSTVWLTAFVRESDAALVNIGEEILVNVLALPGRPLKA ECCCCCHHHCCCCCCCEEEEECHHHHHHHHHHHCCCCEEEECCHHHHHHHHHCCCCCCEE SINYVAASIDPATRRLLVRATIDNKDGVLKPEMFANVTIYSPGEQPAVAVPRQALIYEGN EEEEEEEECCHHHEEEEEEEEECCCCCCCCCHHHEEEEEECCCCCCCEECCCEEEEEECC EVRVWVARPDKSIELRKIKTGLINGDQVAVEGNLSAGEQIVTKGSLFIDRAASGS EEEEEEECCCCCEEEEEEECCCCCCCEEEEECCCCCCCCEEECCCEEEECCCCCC >Mature Secondary Structure ASDTKPVPQLISTKRLLIGFAVLALAGAGAYGYRQFGSAPAKDNIELSSQSKRNGTTFT CCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHCCCCCCCCEEECCCCCCCCCEEC PSAAEWATLTIEPVCEKIFRAEHITEGKVAVDEDRSTPVFSPYAGRVTKLLARPGETVRQ CCCCCEEEEEHHHHHHHHHHHHCCCCCCEEEECCCCCCCCCCHHHHHHHHHHCCCHHHHC GQPLFVIEAADTVQAQNDFIAAITSMNKAKSALDLADIQYKRAKDLFEGRAIPLKDFQQA CCCEEEEECCCHHHCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHH EATSVQAQNDMRSSQTALEAARNKLRILGFTDAAIADFQNKGVIDREITIYAPIGGTVVQ HHHHHHHHHHHHHHHHHHHHHHCCEEEEEECHHHHHHHCCCCCEECEEEEEECCCCEEEE RKVGPGQYVNSGASDPVFVIGDLSTVWLTAFVRESDAALVNIGEEILVNVLALPGRPLKA ECCCCCHHHCCCCCCCEEEEECHHHHHHHHHHHCCCCEEEECCHHHHHHHHHCCCCCCEE SINYVAASIDPATRRLLVRATIDNKDGVLKPEMFANVTIYSPGEQPAVAVPRQALIYEGN EEEEEEEECCHHHEEEEEEEEECCCCCCCCCHHHEEEEEECCCCCCCEECCCEEEEEECC EVRVWVARPDKSIELRKIKTGLINGDQVAVEGNLSAGEQIVTKGSLFIDRAASGS EEEEEEECCCCCEEEEEEECCCCCCCEEEEECCCCCCCCEEECCCEEEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8829543 [H]