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The map label for this gene is yafM [C]

Identifier: 146339655

GI number: 146339655

Start: 2847963

End: 2848454

Strand: Direct

Name: yafM [C]

Synonym: BRADO2648

Alternate gene names: 146339655

Gene position: 2847963-2848454 (Clockwise)

Preceding gene: 146339654

Following gene: 146339657

Centisome position: 38.19

GC content: 58.74

Gene sequence:

>492_bases
TTGTTCTTCTTTACGGTCGTCCTCGAAAACCGTTCGAGCCGTCTGCTCGTCGATCAGATCGACCGTTTCCGCTCCTGCTA
TCGCGATACGCGCGAGCGCCACCCGTTCGAAACGATCGCGATCTGCATCTTGCCGGATCACCTCCACGTCATCTGGGCGT
TGCCGGAGAACGACGGCAACTACCCAATCCGCTGGAGCATGATCAAGAGCGGCTTCTCGCGTGGCCTGAAGCCTCACACG
CAATCGTCCAGTGTGTCCGCAAAACGCGAGAAGGGTATCTGGCAACGCCGCTATTGGGAGCATGCCATCCGTAATCAGGC
GGATCTCGAACGTCATATCGACTATATCCATTTCAATCCCGTCAAGCACGGGCTCGTCTCGCGCGTCTCGGACTGGCCGC
ACAGCAGCTTCCACCGCTACGTCGAACGCGGGTGGCTCGCTGCGGATTGGGGAGGAGATGTGAAGAAGATGTCCGGCTCG
TTCGGCGAATGA

Upstream 100 bases:

>100_bases
GCAAAGGCACGGCGCGCCAAGCGCCGTGACGTGCCCACCGGCCGCGCGCGCGATGGAGTTGATCATGCCGAACTATCGCC
GAGCATCCATCAAAGGCGGC

Downstream 100 bases:

>100_bases
AGGCGGTGGGCACGTCGTCTCGGACGATGCTTCGCATCGCCCGAGACGCCTTTGCCCACCCTACGGTTCATCATGAGAAT
TCGTAGGGTGGGCAAAGGCA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 163; Mature: 163

Protein sequence:

>163_residues
MFFFTVVLENRSSRLLVDQIDRFRSCYRDTRERHPFETIAICILPDHLHVIWALPENDGNYPIRWSMIKSGFSRGLKPHT
QSSSVSAKREKGIWQRRYWEHAIRNQADLERHIDYIHFNPVKHGLVSRVSDWPHSSFHRYVERGWLAADWGGDVKKMSGS
FGE

Sequences:

>Translated_163_residues
MFFFTVVLENRSSRLLVDQIDRFRSCYRDTRERHPFETIAICILPDHLHVIWALPENDGNYPIRWSMIKSGFSRGLKPHT
QSSSVSAKREKGIWQRRYWEHAIRNQADLERHIDYIHFNPVKHGLVSRVSDWPHSSFHRYVERGWLAADWGGDVKKMSGS
FGE
>Mature_163_residues
MFFFTVVLENRSSRLLVDQIDRFRSCYRDTRERHPFETIAICILPDHLHVIWALPENDGNYPIRWSMIKSGFSRGLKPHT
QSSSVSAKREKGIWQRRYWEHAIRNQADLERHIDYIHFNPVKHGLVSRVSDWPHSSFHRYVERGWLAADWGGDVKKMSGS
FGE

Specific function: Unknown

COG id: COG1943

COG function: function code L; Transposase and inactivated derivatives

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: To E.coli yafM [H]

Homologues:

Organism=Escherichia coli, GI1786422, Length=159, Percent_Identity=46.5408805031447, Blast_Score=142, Evalue=1e-35,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002686 [H]

Pfam domain/function: PF01797 Transposase_17 [H]

EC number: NA

Molecular weight: Translated: 19295; Mature: 19295

Theoretical pI: Translated: 9.76; Mature: 9.76

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFFFTVVLENRSSRLLVDQIDRFRSCYRDTRERHPFETIAICILPDHLHVIWALPENDGN
CEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHCCCHHHEEEEEECCCEEEEEEEECCCCC
YPIRWSMIKSGFSRGLKPHTQSSSVSAKREKGIWQRRYWEHAIRNQADLERHIDYIHFNP
CCEEHHHHHHHHHCCCCCCCCCCCCCHHHHHCHHHHHHHHHHHCCHHHHHHHCCEEEECH
VKHGLVSRVSDWPHSSFHRYVERGWLAADWGGDVKKMSGSFGE
HHHHHHHHHCCCCCHHHHHHHHCCCEEECCCCCHHHHCCCCCC
>Mature Secondary Structure
MFFFTVVLENRSSRLLVDQIDRFRSCYRDTRERHPFETIAICILPDHLHVIWALPENDGN
CEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHCCCHHHEEEEEECCCEEEEEEEECCCCC
YPIRWSMIKSGFSRGLKPHTQSSSVSAKREKGIWQRRYWEHAIRNQADLERHIDYIHFNP
CCEEHHHHHHHHHCCCCCCCCCCCCCHHHHHCHHHHHHHHHHHCCHHHHHHHCCEEEECH
VKHGLVSRVSDWPHSSFHRYVERGWLAADWGGDVKKMSGSFGE
HHHHHHHHHCCCCCHHHHHHHHCCCEEECCCCCHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]