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The map label for this gene is 146339634

Identifier: 146339634

GI number: 146339634

Start: 2818835

End: 2819710

Strand: Direct

Name: 146339634

Synonym: BRADO2627

Alternate gene names: NA

Gene position: 2818835-2819710 (Clockwise)

Preceding gene: 146339633

Following gene: 146339635

Centisome position: 37.8

GC content: 66.21

Gene sequence:

>876_bases
ATGACCACCGCGAGCGATTTGCGATCCGGCAAGACACACCGGGACGAGAACTTTCCGGTCGCGTCGTGGATCATCCGTCC
CGAGCACCGGGCACTGATTCTCGCTTTCTACAATTTTGTGCGGACCGCCGACGACATCGCAGACCACCCGAGCCTGCCGG
GCGAGGAGAAGCTGCGGCTGCTCGATCTGCTCGAGGCCGAGCTGACCGGAACGGGCGAGACCCAGGACGTCGCGGTCAGC
TTGCGCCGGGCGCTGGCGGAGCGGGGCATGCCGCCGCGCCACGCGCTCGATCTGCTGGTCGCGTTCCGCATGGACGTGAC
CAAGCTGCGCTACGAGAATTGGGACGAGGTCATCCATTATTGTCGCTATTCGGCAATGCCGGTCGGCCGCTTTATGCTCG
ACGTGCATGGCGAGTCCACAGCGACCTGGCCGGCCTCGGACGCGATCTGCGCCGGCCTGCAGATCAACAACCACCTGCAG
GACTGCGGCAAGGACTACAAGGCGCTCAATCGGGTCTATCTGCCGCGCGATGCGCTGGCCGAGGCCGGCGCCGCCGTCGA
GATGCTTGGCGAGGCCAAGTCGTCGCCGCAGCTCCTGAGCTGTCTGCAGAAGCTCGCCGTGCGCAACGCGGCGCTGCTGG
AGGAGGGCAGGGACCTCAACAGTGGCGTCAAGGATTTCCGCTTCGGATTGGAGATCGCCGTGATCCAGGCTTTCGCCGAC
CGCATCGTGGCGCTGCTTCAGGTGCGCGATCCGCTGAGCGAGCGCGTGCATCTGACACCGGCCGGCATGCTCGGCCTGAC
CTTCACGTCTGTGATGGGCGAGATCGCCCGCCGCGTTGCCGGCCGCCATCCCCAGACCAAATCGGCGGGCGCATGA

Upstream 100 bases:

>100_bases
CAGATCTTCGCCTATATGAGGGCCAACAATCCGTTCGCATGAGCGAAGCGGCGGGCATTGTTTCTGGTAGCGCCCTTTCA
ACCTGACAGCTGTTTCGTCC

Downstream 100 bases:

>100_bases
CCCTCGAAGCCACCGCAGACAATATCGATCACGGCACGGCGGCCTCCGGCAGCTCGTTCTATGCCGCCATGCGCATTCTG
CCGCGCGCCCAGCGCGACGC

Product: putative phytoene synthase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 291; Mature: 290

Protein sequence:

>291_residues
MTTASDLRSGKTHRDENFPVASWIIRPEHRALILAFYNFVRTADDIADHPSLPGEEKLRLLDLLEAELTGTGETQDVAVS
LRRALAERGMPPRHALDLLVAFRMDVTKLRYENWDEVIHYCRYSAMPVGRFMLDVHGESTATWPASDAICAGLQINNHLQ
DCGKDYKALNRVYLPRDALAEAGAAVEMLGEAKSSPQLLSCLQKLAVRNAALLEEGRDLNSGVKDFRFGLEIAVIQAFAD
RIVALLQVRDPLSERVHLTPAGMLGLTFTSVMGEIARRVAGRHPQTKSAGA

Sequences:

>Translated_291_residues
MTTASDLRSGKTHRDENFPVASWIIRPEHRALILAFYNFVRTADDIADHPSLPGEEKLRLLDLLEAELTGTGETQDVAVS
LRRALAERGMPPRHALDLLVAFRMDVTKLRYENWDEVIHYCRYSAMPVGRFMLDVHGESTATWPASDAICAGLQINNHLQ
DCGKDYKALNRVYLPRDALAEAGAAVEMLGEAKSSPQLLSCLQKLAVRNAALLEEGRDLNSGVKDFRFGLEIAVIQAFAD
RIVALLQVRDPLSERVHLTPAGMLGLTFTSVMGEIARRVAGRHPQTKSAGA
>Mature_290_residues
TTASDLRSGKTHRDENFPVASWIIRPEHRALILAFYNFVRTADDIADHPSLPGEEKLRLLDLLEAELTGTGETQDVAVSL
RRALAERGMPPRHALDLLVAFRMDVTKLRYENWDEVIHYCRYSAMPVGRFMLDVHGESTATWPASDAICAGLQINNHLQD
CGKDYKALNRVYLPRDALAEAGAAVEMLGEAKSSPQLLSCLQKLAVRNAALLEEGRDLNSGVKDFRFGLEIAVIQAFADR
IVALLQVRDPLSERVHLTPAGMLGLTFTSVMGEIARRVAGRHPQTKSAGA

Specific function: Probably part of the operon y4aABCD involved in the synthesis of an isoprenoid compound [H]

COG id: COG1562

COG function: function code I; Phytoene/squalene synthetase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the phytoene/squalene synthase family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002060
- InterPro:   IPR017827
- InterPro:   IPR008949 [H]

Pfam domain/function: PF00494 SQS_PSY [H]

EC number: NA

Molecular weight: Translated: 32155; Mature: 32024

Theoretical pI: Translated: 6.60; Mature: 6.60

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTTASDLRSGKTHRDENFPVASWIIRPEHRALILAFYNFVRTADDIADHPSLPGEEKLRL
CCCHHHHHCCCCCCCCCCCHHHEEECCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHH
LDLLEAELTGTGETQDVAVSLRRALAERGMPPRHALDLLVAFRMDVTKLRYENWDEVIHY
HHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHH
CRYSAMPVGRFMLDVHGESTATWPASDAICAGLQINNHLQDCGKDYKALNRVYLPRDALA
HHHCCCCHHHHHEEECCCCCCCCCCCHHHHCCCCHHHHHHHHHHHHHHHHHHCCCHHHHH
EAGAAVEMLGEAKSSPQLLSCLQKLAVRNAALLEEGRDLNSGVKDFRFGLEIAVIQAFAD
HCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHH
RIVALLQVRDPLSERVHLTPAGMLGLTFTSVMGEIARRVAGRHPQTKSAGA
HHHHHHHHHCCHHHCEECCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC
>Mature Secondary Structure 
TTASDLRSGKTHRDENFPVASWIIRPEHRALILAFYNFVRTADDIADHPSLPGEEKLRL
CCHHHHHCCCCCCCCCCCHHHEEECCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHH
LDLLEAELTGTGETQDVAVSLRRALAERGMPPRHALDLLVAFRMDVTKLRYENWDEVIHY
HHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHH
CRYSAMPVGRFMLDVHGESTATWPASDAICAGLQINNHLQDCGKDYKALNRVYLPRDALA
HHHCCCCHHHHHEEECCCCCCCCCCCHHHHCCCCHHHHHHHHHHHHHHHHHHCCCHHHHH
EAGAAVEMLGEAKSSPQLLSCLQKLAVRNAALLEEGRDLNSGVKDFRFGLEIAVIQAFAD
HCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHH
RIVALLQVRDPLSERVHLTPAGMLGLTFTSVMGEIARRVAGRHPQTKSAGA
HHHHHHHHHCCHHHCEECCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9163424 [H]