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The map label for this gene is yliC [C]

Identifier: 146339625

GI number: 146339625

Start: 2807241

End: 2808185

Strand: Direct

Name: yliC [C]

Synonym: BRADO2618

Alternate gene names: 146339625

Gene position: 2807241-2808185 (Clockwise)

Preceding gene: 146339624

Following gene: 146339626

Centisome position: 37.65

GC content: 66.77

Gene sequence:

>945_bases
ATGACCGGTTACCTGCTGCGCCGCCTGGTCTCGACGATCCCGACGCTGCTGATCGTCGCCGGCGCGGTATTCCTGCTGGT
CCGCCTGATCCCCGGCGACCCCGTTCAGGTGATGCTCGGCGATGCCGCCGATCCTGCGCAGGCCGCGGCGCTGAAGCAGC
AGCTCGGCCTCGACCGACCGATCCCCATCCAGTTCCTCTATTGGCTCGAGCGGCTCGCGGTCGGCGATCTCGGCCATTCC
ATCGCCAACGGCCTGCCGGTGCTGCCGCTGATCCTGGAGCGCTTTCAGGTGAGCGCTGTGATCGTGCTGATCGCGGTCGC
CATTGCTGCCTGCATTGCGGTGCCGGCCGGCCTCGTTGCCGCGTGGCGGCAGAACAGCGCGGTCGATCTCGTGATCGTCG
GCAGCGCGACGCTGCTGCTCTCGATCCCGAGCTTCTGGCTCGGCCTGCTCCTGCTGCTGCTGTTCGGCCTCAAGCTGAAA
TGGCTTCCGGTGGTCGGCTATGTCCCGTTCTCGGAGAGCTTTGTCGGCGCGGCCCTGTTCATGGTGCTGCCGGTCGTGAC
GCTGGCGATGATCGAGGTCGGCGTGCTCACGCGCATGGCGCGCGCCGCTGCGATCGACGTGTTGCGGCTCGAATACGTCA
CCCATGCCCGCGCCAAGGGCGTGCCGGAATGGCGGGTGCTGGCGCGGCATGTGCTGCCGAATGCGTTCGCGCCGACCTGG
ACGCTGATCGGCCTCGTGCTCGGGCATCTGCTGGGCGGCATCGCGGTCATCGAGACCGTGTTCACCTTGCCCGGACTCGG
GCGGCTGCTGGTGGATTCGATCTTCGCGCGCGACTATCCGGTGGTGCAGGGCTGTCTGCTGTTCACGGCCCTGATCTATG
TCGTCGTCAATCTGATCGTCGATCTCTGCTACCCATTGTTCGATCCCCGGGTGGCCGTCGCATGA

Upstream 100 bases:

>100_bases
CACGGCGCTGCGCAAGGCGGTGAAGGGCTACTCTGGCTGGCTCTATCCCCAGGCGCGGTTCTGGGGCGTGAGCCTGCAGC
CTTAAGGCCGGAGCGTCATC

Downstream 100 bases:

>100_bases
GGATCAAAGCCAACACGGCGATCGGCGGCGTGCTCGTCGCACTGCTGGGCGGCTCGGCGCTGGCCGCTGTCGTCTGGACG
CCCTTCGATCCGCTGCGCGT

Product: ABC transporter permease

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 314; Mature: 313

Protein sequence:

>314_residues
MTGYLLRRLVSTIPTLLIVAGAVFLLVRLIPGDPVQVMLGDAADPAQAAALKQQLGLDRPIPIQFLYWLERLAVGDLGHS
IANGLPVLPLILERFQVSAVIVLIAVAIAACIAVPAGLVAAWRQNSAVDLVIVGSATLLLSIPSFWLGLLLLLLFGLKLK
WLPVVGYVPFSESFVGAALFMVLPVVTLAMIEVGVLTRMARAAAIDVLRLEYVTHARAKGVPEWRVLARHVLPNAFAPTW
TLIGLVLGHLLGGIAVIETVFTLPGLGRLLVDSIFARDYPVVQGCLLFTALIYVVVNLIVDLCYPLFDPRVAVA

Sequences:

>Translated_314_residues
MTGYLLRRLVSTIPTLLIVAGAVFLLVRLIPGDPVQVMLGDAADPAQAAALKQQLGLDRPIPIQFLYWLERLAVGDLGHS
IANGLPVLPLILERFQVSAVIVLIAVAIAACIAVPAGLVAAWRQNSAVDLVIVGSATLLLSIPSFWLGLLLLLLFGLKLK
WLPVVGYVPFSESFVGAALFMVLPVVTLAMIEVGVLTRMARAAAIDVLRLEYVTHARAKGVPEWRVLARHVLPNAFAPTW
TLIGLVLGHLLGGIAVIETVFTLPGLGRLLVDSIFARDYPVVQGCLLFTALIYVVVNLIVDLCYPLFDPRVAVA
>Mature_313_residues
TGYLLRRLVSTIPTLLIVAGAVFLLVRLIPGDPVQVMLGDAADPAQAAALKQQLGLDRPIPIQFLYWLERLAVGDLGHSI
ANGLPVLPLILERFQVSAVIVLIAVAIAACIAVPAGLVAAWRQNSAVDLVIVGSATLLLSIPSFWLGLLLLLLFGLKLKW
LPVVGYVPFSESFVGAALFMVLPVVTLAMIEVGVLTRMARAAAIDVLRLEYVTHARAKGVPEWRVLARHVLPNAFAPTWT
LIGLVLGHLLGGIAVIETVFTLPGLGRLLVDSIFARDYPVVQGCLLFTALIYVVVNLIVDLCYPLFDPRVAVA

Specific function: Probably part of an ABC transporter complex that could be involved in peptide import. Probably responsible for the translocation of the substrate across the membrane [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI1787053, Length=311, Percent_Identity=39.2282958199357, Blast_Score=212, Evalue=3e-56,
Organism=Escherichia coli, GI1789965, Length=335, Percent_Identity=37.0149253731343, Blast_Score=206, Evalue=2e-54,
Organism=Escherichia coli, GI1789888, Length=314, Percent_Identity=35.6687898089172, Blast_Score=182, Evalue=2e-47,
Organism=Escherichia coli, GI1787497, Length=313, Percent_Identity=34.185303514377, Blast_Score=172, Evalue=2e-44,
Organism=Escherichia coli, GI1787761, Length=324, Percent_Identity=36.7283950617284, Blast_Score=154, Evalue=6e-39,
Organism=Escherichia coli, GI1787550, Length=268, Percent_Identity=29.8507462686567, Blast_Score=122, Evalue=3e-29,
Organism=Escherichia coli, GI1788504, Length=370, Percent_Identity=28.1081081081081, Blast_Score=121, Evalue=6e-29,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 33723; Mature: 33592

Theoretical pI: Translated: 8.46; Mature: 8.46

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTGYLLRRLVSTIPTLLIVAGAVFLLVRLIPGDPVQVMLGDAADPAQAAALKQQLGLDRP
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCHHHHHHHHHHHCCCCC
IPIQFLYWLERLAVGDLGHSIANGLPVLPLILERFQVSAVIVLIAVAIAACIAVPAGLVA
CHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AWRQNSAVDLVIVGSATLLLSIPSFWLGLLLLLLFGLKLKWLPVVGYVPFSESFVGAALF
HHCCCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHCCCHHHHHEEEECCCCHHHHHHHHH
MVLPVVTLAMIEVGVLTRMARAAAIDVLRLEYVTHARAKGVPEWRVLARHVLPNAFAPTW
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCHHH
TLIGLVLGHLLGGIAVIETVFTLPGLGRLLVDSIFARDYPVVQGCLLFTALIYVVVNLIV
HHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHH
DLCYPLFDPRVAVA
HHHHHHCCCCCCCC
>Mature Secondary Structure 
TGYLLRRLVSTIPTLLIVAGAVFLLVRLIPGDPVQVMLGDAADPAQAAALKQQLGLDRP
CHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCHHHHHHHHHHHCCCCC
IPIQFLYWLERLAVGDLGHSIANGLPVLPLILERFQVSAVIVLIAVAIAACIAVPAGLVA
CHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AWRQNSAVDLVIVGSATLLLSIPSFWLGLLLLLLFGLKLKWLPVVGYVPFSESFVGAALF
HHCCCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHCCCHHHHHEEEECCCCHHHHHHHHH
MVLPVVTLAMIEVGVLTRMARAAAIDVLRLEYVTHARAKGVPEWRVLARHVLPNAFAPTW
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCHHH
TLIGLVLGHLLGGIAVIETVFTLPGLGRLLVDSIFARDYPVVQGCLLFTALIYVVVNLIV
HHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHH
DLCYPLFDPRVAVA
HHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11756688 [H]