Definition Bradyrhizobium sp. ORS278 chromosome, complete genome.
Accession NC_009445
Length 7,456,587

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The map label for this gene is 146339443

Identifier: 146339443

GI number: 146339443

Start: 2589144

End: 2591345

Strand: Direct

Name: 146339443

Synonym: BRADO2429

Alternate gene names: NA

Gene position: 2589144-2591345 (Clockwise)

Preceding gene: 146339442

Following gene: 146339444

Centisome position: 34.72

GC content: 66.67

Gene sequence:

>2202_bases
ATGTCGGCCGAACTCGCAACCACACGGGCATCCATGGCAGGCACTGACGCGCCGGCTGAGCAGCCCTTCTACATTCCCAT
GACCGGGCCCGCGGCGCGGCCGCGCCGCTCGCTCAAGCACGACGACACTTTCATCGTGCTCGACGGCCATGGCGATATCG
GCGCCTCGGCCGGCGGTCCGGACGGCCTGTTCAATGCCGATACGCGCTATCTGGCGCGGCTCGAACTGACGCTTGCCGAG
GTACAGCCGCTGTTGCTCGGATCGAGCCTGCGCGACGACAATTCCGGTCTGACCATCGATCTGACCAATCCGGACATCTA
TCATCAGGGCCGGCTCGTGCTGCCGAAGGACATGCTGCACATCGTGCGCACGATCTTTCTGTGGCGGGGCACCTTCTATC
AGCGCATTGGGGTCCAGAACCACGGCGATCGCCGCGCAAGCTTCGATCTGAAGCTGACGTTCGACAATGACTTTGCCGAC
CTGTTCGAGGTCCGTGGCTCCGTGCGCAAGCGGCGCGGCACCGGCTCGGCTCGCCTGATGGGGCCGTCCGACGTGATGCT
CGACTATCGCGGGCTTGACAATGTGACGCGCACGACGGCGCTGCATTTCGACCCGCGGCCGGTGCGGCTGGCGGTCGATG
TCGCCAGCTACCACTTCGACCTGGAGCCGCAGCAATCGACATCGCTGTTCATCGCAGTGACCTGCAACGCCGCGGCCGGG
CAGCAGCCGGGCCGGTTCTTCCGCAGCCTGCTCGCGCATCGCCGCGAGATGCGCCGCTGCACCCACGGTGCGACCACGAT
CGAGACTTCCAACGACATCCTCAACGAGGTGCTGTGCCAGGCGGCCGCCGATCTGAATATCCTGATGACCGACACTCCGG
AGGGGCGTTATCCCTATGCGGGCATTCCCTGGTACTCGACGACGTTCGGCCGCGACGGACTGATCACGGCGATGCAGATG
CTGTGGGTCGATCCGCGAATCGCGCGCGGCGTATTGCGCAGGCTCGCGCGCCATCAGGCCAGGGAAGCGGATCCGCTCGC
GGATGCCGAGCCGGGCAAGATCCTGCACGAGATGCGCGGCGGCGAGATGGCGGCGCTGCGCGAGGTGCCGTTCGCCTGCT
ACTATGGGAGCGTCGATTCCACGCCGTTGTTCGTTTTGCTGGCCGGCCTCTATGTCGAGCGCACCGGCGATCTCGACACC
TTGAAGGAGCTGTGGCCGGCGATCGAACTGGCGCTGAGCTGGATCGACGGGCCAGGAGACCCCGACCGTGACGGCTTCGT
CGAATATCAGCGGGCCTCGGAGCAGGGGCTCGCCAACCAGGGCTGGAAGGATTCCTACGACGCGGTGTTCCATGCCGACG
GCCAACTGGCCGAAGGCAATATCGCGCTCGCCGAGGTGCAGGGCTACGTGTTCGCCGGCAAGCAACTCGCCGCGCGCTGT
GCGCGACGGCTCGGCAAGGCGGATTTGGCCGATCGCCTGGACGCCGAAGCCGCTGCTCTTGCCAAGCGGTTCGAGGACGC
CTTCTGGTGCGAGGAGCTGACCACCTATGCGCTCGCGCTCGACGGCAACAAGCAGCCGTGCCGTGTGCGCACGTCCAATG
CGGGCCAGCTGTTGTTCAGCGGCATGGTGCGCGAGGATCGCGCTCGCAAGGTCGCCGCCGACCTGCTGCGGCCGCATTTC
TTCTCCGGCTGGGGCATCCGCACCGTGGCGCTCGGTGAGGCGCGCTACAATCCGATGTCCTATCACGACGGATCGATATG
GCCGCACGACAACGCGCTGATCACGCTCGGCCTGTCGCGCTACGGCCTGAAACATGCGGTCGAGGAGGTGTTCAAGGGCC
TGTTCGAGGCGGCGGCCTACATGGATCTGCGCCGGCTGCCCGAATTGTTCTGCGGCTTCCGACGAGAGAAGCATCGCGGG
CCGACGCTCTATCCCGTGGCCTGCGCGCCGCAGGCCTGGGCCAGCGCGACGCCGTTCACGCTGCTCGAAGCGGCGCTCGG
GCTGGAGTTCGATGCCGCGCGCGGCGAGATCCGGCTGCGCAATCCGCGGCTGCCGGCGTTCCTCGATTGGGTCGTGCTGC
GCGATCTTCGGCTCGGTCATTCGACGATCGATCTGCGGCTGCGCCGCCACGGCGAGGACGTCTCGATGGAGGTGCTGCGG
CGGCGCGGCCAGATTCAGGTCTCGCTGGTGCTGGCGCAATGA

Upstream 100 bases:

>100_bases
GGAGATGAACCGACTCGCCAAATTCGCGGCGTGAGCCGTATCGAGTGCTGATCGCGCGTCCGCGGCGCCCGGGTCGGCGC
CAACTCGCACGAGGTCCATC

Downstream 100 bases:

>100_bases
GAAACGCGAATCATCGTCGGCGAGCTCCCGGTAAAGCGTTCGGCTTCGTCGCTCTCTCGCTGATCGCGCTGCAGGTTGCC
GGCGCCGATGCGCAGCAGGC

Product: hypothetical protein

Products: NA

Alternate protein names: Amylo-Alpha-1 6-Glucosidase; Glycogen Debranching; Glycogen Debranching Protein; Amylo-Alpha-1 6-Glucosidase Family; Glycogen Debranching Family Protein; LOW QUALITY PROTEIN Amylo-Alpha-1 6-Glucosidase; Neutral Invertase; Glycoside Transferase; Amylo-Alpha-1 6-Glucosidase Protein; Amylo-Alpha-1 6-Glucosidase Family Protein

Number of amino acids: Translated: 733; Mature: 732

Protein sequence:

>733_residues
MSAELATTRASMAGTDAPAEQPFYIPMTGPAARPRRSLKHDDTFIVLDGHGDIGASAGGPDGLFNADTRYLARLELTLAE
VQPLLLGSSLRDDNSGLTIDLTNPDIYHQGRLVLPKDMLHIVRTIFLWRGTFYQRIGVQNHGDRRASFDLKLTFDNDFAD
LFEVRGSVRKRRGTGSARLMGPSDVMLDYRGLDNVTRTTALHFDPRPVRLAVDVASYHFDLEPQQSTSLFIAVTCNAAAG
QQPGRFFRSLLAHRREMRRCTHGATTIETSNDILNEVLCQAAADLNILMTDTPEGRYPYAGIPWYSTTFGRDGLITAMQM
LWVDPRIARGVLRRLARHQAREADPLADAEPGKILHEMRGGEMAALREVPFACYYGSVDSTPLFVLLAGLYVERTGDLDT
LKELWPAIELALSWIDGPGDPDRDGFVEYQRASEQGLANQGWKDSYDAVFHADGQLAEGNIALAEVQGYVFAGKQLAARC
ARRLGKADLADRLDAEAAALAKRFEDAFWCEELTTYALALDGNKQPCRVRTSNAGQLLFSGMVREDRARKVAADLLRPHF
FSGWGIRTVALGEARYNPMSYHDGSIWPHDNALITLGLSRYGLKHAVEEVFKGLFEAAAYMDLRRLPELFCGFRREKHRG
PTLYPVACAPQAWASATPFTLLEAALGLEFDAARGEIRLRNPRLPAFLDWVVLRDLRLGHSTIDLRLRRHGEDVSMEVLR
RRGQIQVSLVLAQ

Sequences:

>Translated_733_residues
MSAELATTRASMAGTDAPAEQPFYIPMTGPAARPRRSLKHDDTFIVLDGHGDIGASAGGPDGLFNADTRYLARLELTLAE
VQPLLLGSSLRDDNSGLTIDLTNPDIYHQGRLVLPKDMLHIVRTIFLWRGTFYQRIGVQNHGDRRASFDLKLTFDNDFAD
LFEVRGSVRKRRGTGSARLMGPSDVMLDYRGLDNVTRTTALHFDPRPVRLAVDVASYHFDLEPQQSTSLFIAVTCNAAAG
QQPGRFFRSLLAHRREMRRCTHGATTIETSNDILNEVLCQAAADLNILMTDTPEGRYPYAGIPWYSTTFGRDGLITAMQM
LWVDPRIARGVLRRLARHQAREADPLADAEPGKILHEMRGGEMAALREVPFACYYGSVDSTPLFVLLAGLYVERTGDLDT
LKELWPAIELALSWIDGPGDPDRDGFVEYQRASEQGLANQGWKDSYDAVFHADGQLAEGNIALAEVQGYVFAGKQLAARC
ARRLGKADLADRLDAEAAALAKRFEDAFWCEELTTYALALDGNKQPCRVRTSNAGQLLFSGMVREDRARKVAADLLRPHF
FSGWGIRTVALGEARYNPMSYHDGSIWPHDNALITLGLSRYGLKHAVEEVFKGLFEAAAYMDLRRLPELFCGFRREKHRG
PTLYPVACAPQAWASATPFTLLEAALGLEFDAARGEIRLRNPRLPAFLDWVVLRDLRLGHSTIDLRLRRHGEDVSMEVLR
RRGQIQVSLVLAQ
>Mature_732_residues
SAELATTRASMAGTDAPAEQPFYIPMTGPAARPRRSLKHDDTFIVLDGHGDIGASAGGPDGLFNADTRYLARLELTLAEV
QPLLLGSSLRDDNSGLTIDLTNPDIYHQGRLVLPKDMLHIVRTIFLWRGTFYQRIGVQNHGDRRASFDLKLTFDNDFADL
FEVRGSVRKRRGTGSARLMGPSDVMLDYRGLDNVTRTTALHFDPRPVRLAVDVASYHFDLEPQQSTSLFIAVTCNAAAGQ
QPGRFFRSLLAHRREMRRCTHGATTIETSNDILNEVLCQAAADLNILMTDTPEGRYPYAGIPWYSTTFGRDGLITAMQML
WVDPRIARGVLRRLARHQAREADPLADAEPGKILHEMRGGEMAALREVPFACYYGSVDSTPLFVLLAGLYVERTGDLDTL
KELWPAIELALSWIDGPGDPDRDGFVEYQRASEQGLANQGWKDSYDAVFHADGQLAEGNIALAEVQGYVFAGKQLAARCA
RRLGKADLADRLDAEAAALAKRFEDAFWCEELTTYALALDGNKQPCRVRTSNAGQLLFSGMVREDRARKVAADLLRPHFF
SGWGIRTVALGEARYNPMSYHDGSIWPHDNALITLGLSRYGLKHAVEEVFKGLFEAAAYMDLRRLPELFCGFRREKHRGP
TLYPVACAPQAWASATPFTLLEAALGLEFDAARGEIRLRNPRLPAFLDWVVLRDLRLGHSTIDLRLRRHGEDVSMEVLRR
RGQIQVSLVLAQ

Specific function: Unknown

COG id: COG3408

COG function: function code G; Glycogen debranching enzyme

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 81628; Mature: 81497

Theoretical pI: Translated: 6.83; Mature: 6.83

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSAELATTRASMAGTDAPAEQPFYIPMTGPAARPRRSLKHDDTFIVLDGHGDIGASAGGP
CCCCHHHHHHHHCCCCCCCCCCEEEECCCCCCCCHHCCCCCCEEEEEECCCCCCCCCCCC
DGLFNADTRYLARLELTLAEVQPLLLGSSLRDDNSGLTIDLTNPDIYHQGRLVLPKDMLH
CCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEECCCCEEECCCEECCHHHHH
IVRTIFLWRGTFYQRIGVQNHGDRRASFDLKLTFDNDFADLFEVRGSVRKRRGTGSARLM
HHHHHHHHHHHHHHHCCCCCCCCCCEEEEEEEEECCCHHHHHHHHHHHHHHCCCCCEEEE
GPSDVMLDYRGLDNVTRTTALHFDPRPVRLAVDVASYHFDLEPQQSTSLFIAVTCNAAAG
CCHHHEEEECCCCCCHHEEEEEECCCCEEEEEEEEEEEECCCCCCCCEEEEEEEECCCCC
QQPGRFFRSLLAHRREMRRCTHGATTIETSNDILNEVLCQAAADLNILMTDTPEGRYPYA
CCHHHHHHHHHHHHHHHHHHHCCCCEEECCHHHHHHHHHHHHCCCEEEEECCCCCCCCCC
GIPWYSTTFGRDGLITAMQMLWVDPRIARGVLRRLARHQAREADPLADAEPGKILHEMRG
CCCCCCCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHCC
GEMAALREVPFACYYGSVDSTPLFVLLAGLYVERTGDLDTLKELWPAIELALSWIDGPGD
CCCHHHHHCCCEEEECCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCCC
PDRDGFVEYQRASEQGLANQGWKDSYDAVFHADGQLAEGNIALAEVQGYVFAGKQLAARC
CCCCCHHHHHHHHHCCCCCCCCCCCCCEEEECCCCCCCCCEEEEEECCEEEECHHHHHHH
ARRLGKADLADRLDAEAAALAKRFEDAFWCEELTTYALALDGNKQPCRVRTSNAGQLLFS
HHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCEEEEEECCCCCCCEEEECCCCHHHHH
GMVREDRARKVAADLLRPHFFSGWGIRTVALGEARYNPMSYHDGSIWPHDNALITLGLSR
HHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCEEEEEHHH
YGLKHAVEEVFKGLFEAAAYMDLRRLPELFCGFRREKHRGPTLYPVACAPQAWASATPFT
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCHHHCCCCCHH
LLEAALGLEFDAARGEIRLRNPRLPAFLDWVVLRDLRLGHSTIDLRLRRHGEDVSMEVLR
HHHHHHCCEEECCCCEEEEECCCCCHHHHHHHHHHHHCCCCEEEEEEECCCCCHHHHHHH
RRGQIQVSLVLAQ
CCCCEEEEEEEEC
>Mature Secondary Structure 
SAELATTRASMAGTDAPAEQPFYIPMTGPAARPRRSLKHDDTFIVLDGHGDIGASAGGP
CCCHHHHHHHHCCCCCCCCCCEEEECCCCCCCCHHCCCCCCEEEEEECCCCCCCCCCCC
DGLFNADTRYLARLELTLAEVQPLLLGSSLRDDNSGLTIDLTNPDIYHQGRLVLPKDMLH
CCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEECCCCEEECCCEECCHHHHH
IVRTIFLWRGTFYQRIGVQNHGDRRASFDLKLTFDNDFADLFEVRGSVRKRRGTGSARLM
HHHHHHHHHHHHHHHCCCCCCCCCCEEEEEEEEECCCHHHHHHHHHHHHHHCCCCCEEEE
GPSDVMLDYRGLDNVTRTTALHFDPRPVRLAVDVASYHFDLEPQQSTSLFIAVTCNAAAG
CCHHHEEEECCCCCCHHEEEEEECCCCEEEEEEEEEEEECCCCCCCCEEEEEEEECCCCC
QQPGRFFRSLLAHRREMRRCTHGATTIETSNDILNEVLCQAAADLNILMTDTPEGRYPYA
CCHHHHHHHHHHHHHHHHHHHCCCCEEECCHHHHHHHHHHHHCCCEEEEECCCCCCCCCC
GIPWYSTTFGRDGLITAMQMLWVDPRIARGVLRRLARHQAREADPLADAEPGKILHEMRG
CCCCCCCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHCC
GEMAALREVPFACYYGSVDSTPLFVLLAGLYVERTGDLDTLKELWPAIELALSWIDGPGD
CCCHHHHHCCCEEEECCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCCC
PDRDGFVEYQRASEQGLANQGWKDSYDAVFHADGQLAEGNIALAEVQGYVFAGKQLAARC
CCCCCHHHHHHHHHCCCCCCCCCCCCCEEEECCCCCCCCCEEEEEECCEEEECHHHHHHH
ARRLGKADLADRLDAEAAALAKRFEDAFWCEELTTYALALDGNKQPCRVRTSNAGQLLFS
HHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCEEEEEECCCCCCCEEEECCCCHHHHH
GMVREDRARKVAADLLRPHFFSGWGIRTVALGEARYNPMSYHDGSIWPHDNALITLGLSR
HHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCEEEEEHHH
YGLKHAVEEVFKGLFEAAAYMDLRRLPELFCGFRREKHRGPTLYPVACAPQAWASATPFT
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCHHHCCCCCHH
LLEAALGLEFDAARGEIRLRNPRLPAFLDWVVLRDLRLGHSTIDLRLRRHGEDVSMEVLR
HHHHHHCCEEECCCCEEEEECCCCCHHHHHHHHHHHHCCCCEEEEEEECCCCCHHHHHHH
RRGQIQVSLVLAQ
CCCCEEEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA