| Definition | Bradyrhizobium sp. ORS278 chromosome, complete genome. |
|---|---|
| Accession | NC_009445 |
| Length | 7,456,587 |
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The map label for this gene is 146339392
Identifier: 146339392
GI number: 146339392
Start: 2529875
End: 2532139
Strand: Direct
Name: 146339392
Synonym: BRADO2377
Alternate gene names: NA
Gene position: 2529875-2532139 (Clockwise)
Preceding gene: 146339391
Following gene: 146339394
Centisome position: 33.93
GC content: 66.53
Gene sequence:
>2265_bases ATGAGCGCGCAGGTTGCGCAGCGATGGGGGCATCTGATGCGGTCGAGGAATTTTCACCGGGCGCTGTCGAGCGCGGCGCT CGCGGTCCTGCTTGCGGCTTTCGCGGTGCCTGTGCACGCCGATGATCGCGATGCGAATGGCGATCGCTCCTATCACGACC GCGATGACGACCATGATCGCGACCGCGATCACGATCGGCGCGGCCGCCGATCGCCGCGCGTGGTGCTGATCTCGCTCGAC GGCGCCAAGCCCGACTTCATCGAGAAATTCATTGAGCAGGGCGTGCTGCCGCGCGACGGCGGGCTGGCCCGGCTGAGCCG CCGCGGCGCGGTCGCGAAGCAGAATGTGACGGCGTCGCCATCACTGACGGCGGTGTCGCATGTCGAGATCGCCACCGGCT CCACGGCGGTTCACAACGACATTCCGTCGAACACGTTTCAGGCGATCGTGGCGCCGATCACCTCCAGCATCAGCGGTTTC GCCGCGCCGATCGGCGGCTACCGGCTGAGCCCGCTCGGGCCGAGCCCGCAGCCGACCGCGGCGCCCTTGTGGGTGCAACT GCGCCAGCACGGCAAGAAGGTGGTCACCGCGACCTGGCCGGGCGGCGACGGCGCCGACATCTCGATCAACAATACCGTGG TGCAGCCGGCGCAGCCGACCCGTATCACCGACTACACCGTTCCGTTCGGCGCCTTCGGCGGCCTGTCGGCGCAAGGCTTT TCGCTGACGCGCAGCGACTTCGTGACGGATCCGGCCGTGATCGCGGCGCTGCAGTCGGCGGGCCATTCGTCCTACAGCCC GGTGCTCGTCACGGCGGCGCCGATCGAGACCTTCTCCTGCGCCTCCGCGGCGCCCGCGACTTGTACCAGTGCCGCGACGC TCGACCTGAAATACGCGATCCGCGTCGCCGCGATCGACACCAGCAATGACGGTCAGGTGAACTACGACACGCTGGTGTTC TTCGATACGACCCGCGGCATCACCGCGGGGCCGTTCCAGGCGCCATCCACGGGACCCGCTTTCGCCAAGATCGGCGGCGA GAATGCTCCATTCTTCTTCGAGGGCAGCGGCGCCAAGGTCGGCACGGCCTATTTCGTCTCCGCGCTGGCGCCTGATCTCT CGACCGTGCGCTTCGCCCGCTACGGCGCCAACTACATCCCGCGCAACGCGCCCGTGCTGGCCGATGTCGACGACATCAAC AACAATATCGGCTTTTGGCGCCCGCAGGCCGATTACCGCGTCCCCGAGCGGCTGAGCCCGGGCTTCACCAGCTTCCCGGA CGTCGAGATCGAGGCCATGTTCGAGGACATGGTCAAAACCTTCGTGCGCTACCAGGCGGCGATCGGCGAGCGCGCCATCC GCAAGCATTCGGATGCTGATCTCGTGATGATCTATATCGAGCAGCCCGACGGCTCCGAGCACCAGTTCCTGCTGACCGAT CCGCGCCAGGGCACCAACCCCAAGGATCCGAACTCGATCGGCGCCGGCCAAGACCCAGCCAAGGTCGCGCGCTACGCGTC CTACATCAAGGCGGCGTATCAGGCGGCCGACAAGGCGGTGAAGCGGATCAGCGACACCGCGGGCCGTGACAGCAACGTCA TCGTGGTGTCGGATCACGGCTTCGCGCCGTTCCACACCTCGGTGAGCATGCTCAACATCCTGCGCAACGCCGGCATCGAC ACCACCAAACTGGCGATCCGCACCTCGGGCCCCGCAGTCAACATCTACGTCAACCTGCAGAACCGCGAGGCGGGCGGCAC TGTCGATCCGGCGAGCTACAATGCGCTGGTGACGCAGGTCGCCAATGCCGTGAAGAATGCCGTCGATCCCAATCCGAAGT TCAACACCTCGCTCAAGGACGGCCGCCTGTTCACGGTGGTCGAGAGCCGGCCGCTGCAATGCGACGCCGGCACGGGGCTC TGCACCAGCAAGACCATCGGCCAGGACTTCGGCGACGTGTTCGCGCTGATGGCGCCCGGCTATAATTTCGACGGCATCCA GAACCCCGGCATAGCCCGCCTCGGCGACGCGCCGTTCAACGCGACCACGACGACGCTGTCGATGCCGAACTTCTACGGCG CCCACGGCCACGATCCGGAGATCGCCGAGATGAGCGCGACCTTCATCGCCGCTGGTCCCGACATTCGCGAGGGAACGACG ATCCGGCGGATGCGCAACATCGACGTGGCGCCGACCATCATGCGGATCCTCGGCGTCAAGCCGCAGCAGGTCGATGGCGA GGTGCTGCACAAGATCCTGCGCTGA
Upstream 100 bases:
>100_bases CGCGCGTTCACACGTCATCTGTCGCGAGATCGTCATATCTGTCGCGCGCGCGTCACATGCGCGTCAGCCAAGCCCGGTAG TCGATACTCCCGTTTCAAGA
Downstream 100 bases:
>100_bases GCTGCGCAGACTGAACGACTACGCGACGGCCGGCATGTGCTCGGCCGCCGCGGCGAGGCTCGGCGCGGCCACGATCTCGA GCTGCTGGCGCAGCCAGCGG
Product: putative phosphodiesterase-nucleotide pyrophosphatase
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 754; Mature: 753
Protein sequence:
>754_residues MSAQVAQRWGHLMRSRNFHRALSSAALAVLLAAFAVPVHADDRDANGDRSYHDRDDDHDRDRDHDRRGRRSPRVVLISLD GAKPDFIEKFIEQGVLPRDGGLARLSRRGAVAKQNVTASPSLTAVSHVEIATGSTAVHNDIPSNTFQAIVAPITSSISGF AAPIGGYRLSPLGPSPQPTAAPLWVQLRQHGKKVVTATWPGGDGADISINNTVVQPAQPTRITDYTVPFGAFGGLSAQGF SLTRSDFVTDPAVIAALQSAGHSSYSPVLVTAAPIETFSCASAAPATCTSAATLDLKYAIRVAAIDTSNDGQVNYDTLVF FDTTRGITAGPFQAPSTGPAFAKIGGENAPFFFEGSGAKVGTAYFVSALAPDLSTVRFARYGANYIPRNAPVLADVDDIN NNIGFWRPQADYRVPERLSPGFTSFPDVEIEAMFEDMVKTFVRYQAAIGERAIRKHSDADLVMIYIEQPDGSEHQFLLTD PRQGTNPKDPNSIGAGQDPAKVARYASYIKAAYQAADKAVKRISDTAGRDSNVIVVSDHGFAPFHTSVSMLNILRNAGID TTKLAIRTSGPAVNIYVNLQNREAGGTVDPASYNALVTQVANAVKNAVDPNPKFNTSLKDGRLFTVVESRPLQCDAGTGL CTSKTIGQDFGDVFALMAPGYNFDGIQNPGIARLGDAPFNATTTTLSMPNFYGAHGHDPEIAEMSATFIAAGPDIREGTT IRRMRNIDVAPTIMRILGVKPQQVDGEVLHKILR
Sequences:
>Translated_754_residues MSAQVAQRWGHLMRSRNFHRALSSAALAVLLAAFAVPVHADDRDANGDRSYHDRDDDHDRDRDHDRRGRRSPRVVLISLD GAKPDFIEKFIEQGVLPRDGGLARLSRRGAVAKQNVTASPSLTAVSHVEIATGSTAVHNDIPSNTFQAIVAPITSSISGF AAPIGGYRLSPLGPSPQPTAAPLWVQLRQHGKKVVTATWPGGDGADISINNTVVQPAQPTRITDYTVPFGAFGGLSAQGF SLTRSDFVTDPAVIAALQSAGHSSYSPVLVTAAPIETFSCASAAPATCTSAATLDLKYAIRVAAIDTSNDGQVNYDTLVF FDTTRGITAGPFQAPSTGPAFAKIGGENAPFFFEGSGAKVGTAYFVSALAPDLSTVRFARYGANYIPRNAPVLADVDDIN NNIGFWRPQADYRVPERLSPGFTSFPDVEIEAMFEDMVKTFVRYQAAIGERAIRKHSDADLVMIYIEQPDGSEHQFLLTD PRQGTNPKDPNSIGAGQDPAKVARYASYIKAAYQAADKAVKRISDTAGRDSNVIVVSDHGFAPFHTSVSMLNILRNAGID TTKLAIRTSGPAVNIYVNLQNREAGGTVDPASYNALVTQVANAVKNAVDPNPKFNTSLKDGRLFTVVESRPLQCDAGTGL CTSKTIGQDFGDVFALMAPGYNFDGIQNPGIARLGDAPFNATTTTLSMPNFYGAHGHDPEIAEMSATFIAAGPDIREGTT IRRMRNIDVAPTIMRILGVKPQQVDGEVLHKILR >Mature_753_residues SAQVAQRWGHLMRSRNFHRALSSAALAVLLAAFAVPVHADDRDANGDRSYHDRDDDHDRDRDHDRRGRRSPRVVLISLDG AKPDFIEKFIEQGVLPRDGGLARLSRRGAVAKQNVTASPSLTAVSHVEIATGSTAVHNDIPSNTFQAIVAPITSSISGFA APIGGYRLSPLGPSPQPTAAPLWVQLRQHGKKVVTATWPGGDGADISINNTVVQPAQPTRITDYTVPFGAFGGLSAQGFS LTRSDFVTDPAVIAALQSAGHSSYSPVLVTAAPIETFSCASAAPATCTSAATLDLKYAIRVAAIDTSNDGQVNYDTLVFF DTTRGITAGPFQAPSTGPAFAKIGGENAPFFFEGSGAKVGTAYFVSALAPDLSTVRFARYGANYIPRNAPVLADVDDINN NIGFWRPQADYRVPERLSPGFTSFPDVEIEAMFEDMVKTFVRYQAAIGERAIRKHSDADLVMIYIEQPDGSEHQFLLTDP RQGTNPKDPNSIGAGQDPAKVARYASYIKAAYQAADKAVKRISDTAGRDSNVIVVSDHGFAPFHTSVSMLNILRNAGIDT TKLAIRTSGPAVNIYVNLQNREAGGTVDPASYNALVTQVANAVKNAVDPNPKFNTSLKDGRLFTVVESRPLQCDAGTGLC TSKTIGQDFGDVFALMAPGYNFDGIQNPGIARLGDAPFNATTTTLSMPNFYGAHGHDPEIAEMSATFIAAGPDIREGTTI RRMRNIDVAPTIMRILGVKPQQVDGEVLHKILR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 80681; Mature: 80550
Theoretical pI: Translated: 7.00; Mature: 7.00
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSAQVAQRWGHLMRSRNFHRALSSAALAVLLAAFAVPVHADDRDANGDRSYHDRDDDHDR CCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCC DRDHDRRGRRSPRVVLISLDGAKPDFIEKFIEQGVLPRDGGLARLSRRGAVAKQNVTASP CCCHHHHCCCCCCEEEEEECCCCHHHHHHHHHCCCCCCCCCHHHHHHCCCCCCCCCCCCC SLTAVSHVEIATGSTAVHNDIPSNTFQAIVAPITSSISGFAAPIGGYRLSPLGPSPQPTA CCEEEEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHCHHHCCCCCEEECCCCCCCCCCC APLWVQLRQHGKKVVTATWPGGDGADISINNTVVQPAQPTRITDYTVPFGAFGGLSAQGF CHHHHHHHHCCCEEEEEECCCCCCCEEEECCEEECCCCCCEEEEEECCCCCCCCCCCCCC SLTRSDFVTDPAVIAALQSAGHSSYSPVLVTAAPIETFSCASAAPATCTSAATLDLKYAI EEEHHHCCCCHHHHHHHHHCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCEEEEEEEEE RVAAIDTSNDGQVNYDTLVFFDTTRGITAGPFQAPSTGPAFAKIGGENAPFFFEGSGAKV EEEEEECCCCCEEEEEEEEEEECCCCCCCCCCCCCCCCCCCEEECCCCCCEEEECCCCCC GTAYFVSALAPDLSTVRFARYGANYIPRNAPVLADVDDINNNIGFWRPQADYRVPERLSP HHHHHHHHHCCCHHHHHHHHHCCCCCCCCCCEEEEHHHCCCCCCEECCCCCCCCCHHCCC GFTSFPDVEIEAMFEDMVKTFVRYQAAIGERAIRKHSDADLVMIYIEQPDGSEHQFLLTD CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCEEEEEC PRQGTNPKDPNSIGAGQDPAKVARYASYIKAAYQAADKAVKRISDTAGRDSNVIVVSDHG CCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCC FAPFHTSVSMLNILRNAGIDTTKLAIRTSGPAVNIYVNLQNREAGGTVDPASYNALVTQV CCCHHHHHHHHHHHHHCCCCEEEEEEEECCCEEEEEEEEECCCCCCCCCCHHHHHHHHHH ANAVKNAVDPNPKFNTSLKDGRLFTVVESRPLQCDAGTGLCTSKTIGQDFGDVFALMAPG HHHHHHHCCCCCCCCCCCCCCEEEEEECCCCCEECCCCCCCCCCHHHHHHHHHHHHHCCC YNFDGIQNPGIARLGDAPFNATTTTLSMPNFYGAHGHDPEIAEMSATFIAAGPDIREGTT CCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCHHHHCEEEEECCCCCCCCCH IRRMRNIDVAPTIMRILGVKPQQVDGEVLHKILR HHHHHCCCHHHHHHHHHCCCCCCCCHHHHHHHHC >Mature Secondary Structure SAQVAQRWGHLMRSRNFHRALSSAALAVLLAAFAVPVHADDRDANGDRSYHDRDDDHDR CCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCC DRDHDRRGRRSPRVVLISLDGAKPDFIEKFIEQGVLPRDGGLARLSRRGAVAKQNVTASP CCCHHHHCCCCCCEEEEEECCCCHHHHHHHHHCCCCCCCCCHHHHHHCCCCCCCCCCCCC SLTAVSHVEIATGSTAVHNDIPSNTFQAIVAPITSSISGFAAPIGGYRLSPLGPSPQPTA CCEEEEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHCHHHCCCCCEEECCCCCCCCCCC APLWVQLRQHGKKVVTATWPGGDGADISINNTVVQPAQPTRITDYTVPFGAFGGLSAQGF CHHHHHHHHCCCEEEEEECCCCCCCEEEECCEEECCCCCCEEEEEECCCCCCCCCCCCCC SLTRSDFVTDPAVIAALQSAGHSSYSPVLVTAAPIETFSCASAAPATCTSAATLDLKYAI EEEHHHCCCCHHHHHHHHHCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCEEEEEEEEE RVAAIDTSNDGQVNYDTLVFFDTTRGITAGPFQAPSTGPAFAKIGGENAPFFFEGSGAKV EEEEEECCCCCEEEEEEEEEEECCCCCCCCCCCCCCCCCCCEEECCCCCCEEEECCCCCC GTAYFVSALAPDLSTVRFARYGANYIPRNAPVLADVDDINNNIGFWRPQADYRVPERLSP HHHHHHHHHCCCHHHHHHHHHCCCCCCCCCCEEEEHHHCCCCCCEECCCCCCCCCHHCCC GFTSFPDVEIEAMFEDMVKTFVRYQAAIGERAIRKHSDADLVMIYIEQPDGSEHQFLLTD CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCEEEEEC PRQGTNPKDPNSIGAGQDPAKVARYASYIKAAYQAADKAVKRISDTAGRDSNVIVVSDHG CCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCC FAPFHTSVSMLNILRNAGIDTTKLAIRTSGPAVNIYVNLQNREAGGTVDPASYNALVTQV CCCHHHHHHHHHHHHHCCCCEEEEEEEECCCEEEEEEEEECCCCCCCCCCHHHHHHHHHH ANAVKNAVDPNPKFNTSLKDGRLFTVVESRPLQCDAGTGLCTSKTIGQDFGDVFALMAPG HHHHHHHCCCCCCCCCCCCCCEEEEEECCCCCEECCCCCCCCCCHHHHHHHHHHHHHCCC YNFDGIQNPGIARLGDAPFNATTTTLSMPNFYGAHGHDPEIAEMSATFIAAGPDIREGTT CCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCHHHHCEEEEECCCCCCCCCH IRRMRNIDVAPTIMRILGVKPQQVDGEVLHKILR HHHHHCCCHHHHHHHHHCCCCCCCCHHHHHHHHC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA