Definition Bradyrhizobium sp. ORS278 chromosome, complete genome.
Accession NC_009445
Length 7,456,587

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The map label for this gene is tap [C]

Identifier: 146339106

GI number: 146339106

Start: 2196047

End: 2197780

Strand: Direct

Name: tap [C]

Synonym: BRADO2060

Alternate gene names: 146339106

Gene position: 2196047-2197780 (Clockwise)

Preceding gene: 146339105

Following gene: 146339107

Centisome position: 29.45

GC content: 67.53

Gene sequence:

>1734_bases
ATGTTCCGATTCCTCAACCGCTTCCGAATCTCGACCAAGCTCGTGACCGCCACGCTCGGCGGAATGATGTTCGTCGTCAT
CATGATCACGAGTCAGATCGTCGGCAACGCCAGCATTGACCGCGATCTCAACCTCGCCTTCGACCAGCAGGACATCGCCA
GGCTGGCGATGGACACCAAGGCCGCGGCGCGGCAGATGCAGCTTGCCGTGCGCGACATCAGACTGGCGAACTCCGACGCC
GAGATCGGTGCCGCAGAGCAGCGCCTTGCCGACGGACGCCGGGCGGCCGACGAGTTCTGCGCCGAGATGACGCTCAAGCC
CGCGTCGGCCGAGACCAAGGCCCGTGTCCAGGCGTTGCAGACCGCGATCGAGGCCTACGCCGGCGACGCCAAGCGCATCG
TCGCGATCCGGCAGAGGATCGCCGACGACCTCGCGGCGGGCAGATCCGCGGACACTGCGGCACGTGAAGCCGAGGCGGCG
GCGCTGGCGCGCAACGTCACTTTGCCGATTGCAAAGACGATCGATGAAGTGTCCGACACCATCGTGAGCTTCGCATCCTC
CAAAGCGGCCGCCGACAAGCGAGCGGTCTGGGCGGTCATCTCCAAATCCGAAACAGTTTCTGTCGCAATGGGCGCCATCG
CGGTTCTCGTGCTGGCCGCGACGGGCCTGATGAGCGTCTTCGCAGTGTCGCGGCCGATCGGCCGGATGGTGCAGAACATG
ACCGCGCTGGCGGGCGGCGAGTTGCAGGTTTCGATCACCGGATTGGAACGCGGTGACGAGGTCGGCGACATGGCGCGGGC
GACGCAGGTGTTCAAGACCAGCCTGATTGAAACGCATCGCCTGCGTGCCGAGCAGGTCGCGGCGGAAGCGCGCGCGGACG
CTCAGCGCAAGCAGGACGTCGATGCCTTCACCGCGGCGTTCGAGAGCGCGATCGGTGGCATCGTCGATCGTGTCTCGTCA
AACTCACTCAGCCTGGAGCAGGCGGCGTCCACGCTCGCGAACACCGCGTCGACCACGAGGGAGCTGTCGACGACGGTGGC
CTCCGCCTCGGAGGAGGCGTCCGCCAGCGTCCAGTCGGTCGCGGCCGCGACCGAGGAGATGGCCGCGACCGCGGCCGAGA
TCGGTCGTCAGATCGAGGGCGCATCGCGCGTTGCCCAGAGCGCGGTGGCGCAGGCGACGAGCACGGACCAGTCGATGACC
AAGCTGGCCGGTGCCGCGGACAAGGTCGGCAGCATCGTCGGCATGATCACCGCGATCGCGCAGCAGACCAATCTGCTGGC
GCTCAATGCCACGATCGAAGCCGCGCGCGCGGGCTCCGCCGGCCGCGGTTTTGCGATCGTGGCCTCGGAGGTGAAGGAAC
TCGCCGCCCAGACGGCCGACGCGACCAAGGACATCTCCGGCTACATCGCCGAGATCCAGTCCGCGGCCTCGACGGCGGTC
GGCGCGATCAAGGAGATCATGTCCACGATCGCGGGCATGTCGGAGATCACCGGCGCCATCGCCGCTGCCGCCGAGGAGCA
GGGCAACGCAACCAAGGAAATCTCCCGTAACGTGCAGCAGGCTGCTGTCGGTGCGTCCGAGGTGTCATCGGGGATCGTCG
AGGTGCAGTCCGGCGCCACCCACACCGGTGCGGCATCATCGCAGGTCCTGACCGCGGCGCAGTCGCTGTCCGCCGACGGC
CTGCGCCTGAAGCAGGAGGTCGTGAGCTTCCTCGCCCGCGTGCGCACGGCTTGA

Upstream 100 bases:

>100_bases
GTCGCGAGAAATCTCGCGTTGATGCTTGTGCTGACACAACGATCCCGGATCCGGCGAATGCGAAACCGCGCTGAGTGCAA
CTCGCAAGTCTCAGCCCGCC

Downstream 100 bases:

>100_bases
GCGCTCTCGAGGTGTTCGAGCAGATCGACGGCAGGCATCCACGATCTTGCGGGAACCTCTGGCTGGCCGTGCGACAAACT
CAGCACGCGGCGAGCGGGCT

Product: putative methyl-accepting chemotaxis receptor/sensory transducer signal peptide

Products: NA

Alternate protein names: Methyl-accepting chemotaxis protein [H]

Number of amino acids: Translated: 577; Mature: 577

Protein sequence:

>577_residues
MFRFLNRFRISTKLVTATLGGMMFVVIMITSQIVGNASIDRDLNLAFDQQDIARLAMDTKAAARQMQLAVRDIRLANSDA
EIGAAEQRLADGRRAADEFCAEMTLKPASAETKARVQALQTAIEAYAGDAKRIVAIRQRIADDLAAGRSADTAAREAEAA
ALARNVTLPIAKTIDEVSDTIVSFASSKAAADKRAVWAVISKSETVSVAMGAIAVLVLAATGLMSVFAVSRPIGRMVQNM
TALAGGELQVSITGLERGDEVGDMARATQVFKTSLIETHRLRAEQVAAEARADAQRKQDVDAFTAAFESAIGGIVDRVSS
NSLSLEQAASTLANTASTTRELSTTVASASEEASASVQSVAAATEEMAATAAEIGRQIEGASRVAQSAVAQATSTDQSMT
KLAGAADKVGSIVGMITAIAQQTNLLALNATIEAARAGSAGRGFAIVASEVKELAAQTADATKDISGYIAEIQSAASTAV
GAIKEIMSTIAGMSEITGAIAAAAEEQGNATKEISRNVQQAAVGASEVSSGIVEVQSGATHTGAASSQVLTAAQSLSADG
LRLKQEVVSFLARVRTA

Sequences:

>Translated_577_residues
MFRFLNRFRISTKLVTATLGGMMFVVIMITSQIVGNASIDRDLNLAFDQQDIARLAMDTKAAARQMQLAVRDIRLANSDA
EIGAAEQRLADGRRAADEFCAEMTLKPASAETKARVQALQTAIEAYAGDAKRIVAIRQRIADDLAAGRSADTAAREAEAA
ALARNVTLPIAKTIDEVSDTIVSFASSKAAADKRAVWAVISKSETVSVAMGAIAVLVLAATGLMSVFAVSRPIGRMVQNM
TALAGGELQVSITGLERGDEVGDMARATQVFKTSLIETHRLRAEQVAAEARADAQRKQDVDAFTAAFESAIGGIVDRVSS
NSLSLEQAASTLANTASTTRELSTTVASASEEASASVQSVAAATEEMAATAAEIGRQIEGASRVAQSAVAQATSTDQSMT
KLAGAADKVGSIVGMITAIAQQTNLLALNATIEAARAGSAGRGFAIVASEVKELAAQTADATKDISGYIAEIQSAASTAV
GAIKEIMSTIAGMSEITGAIAAAAEEQGNATKEISRNVQQAAVGASEVSSGIVEVQSGATHTGAASSQVLTAAQSLSADG
LRLKQEVVSFLARVRTA
>Mature_577_residues
MFRFLNRFRISTKLVTATLGGMMFVVIMITSQIVGNASIDRDLNLAFDQQDIARLAMDTKAAARQMQLAVRDIRLANSDA
EIGAAEQRLADGRRAADEFCAEMTLKPASAETKARVQALQTAIEAYAGDAKRIVAIRQRIADDLAAGRSADTAAREAEAA
ALARNVTLPIAKTIDEVSDTIVSFASSKAAADKRAVWAVISKSETVSVAMGAIAVLVLAATGLMSVFAVSRPIGRMVQNM
TALAGGELQVSITGLERGDEVGDMARATQVFKTSLIETHRLRAEQVAAEARADAQRKQDVDAFTAAFESAIGGIVDRVSS
NSLSLEQAASTLANTASTTRELSTTVASASEEASASVQSVAAATEEMAATAAEIGRQIEGASRVAQSAVAQATSTDQSMT
KLAGAADKVGSIVGMITAIAQQTNLLALNATIEAARAGSAGRGFAIVASEVKELAAQTADATKDISGYIAEIQSAASTAV
GAIKEIMSTIAGMSEITGAIAAAAEEQGNATKEISRNVQQAAVGASEVSSGIVEVQSGATHTGAASSQVLTAAQSLSADG
LRLKQEVVSFLARVRTA

Specific function: Chemotactic-signal transducers respond to changes in the concentration of attractants and repellents in the environment, transduce a signal from the outside to the inside of the cell, and facilitate sensory adaptation through the variation of the level of

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 methyl-accepting transducer domain [H]

Homologues:

Organism=Escherichia coli, GI1788194, Length=193, Percent_Identity=35.7512953367876, Blast_Score=105, Evalue=1e-23,
Organism=Escherichia coli, GI1788195, Length=308, Percent_Identity=29.5454545454545, Blast_Score=103, Evalue=3e-23,
Organism=Escherichia coli, GI1787690, Length=185, Percent_Identity=37.8378378378378, Blast_Score=100, Evalue=4e-22,
Organism=Escherichia coli, GI2367378, Length=364, Percent_Identity=28.5714285714286, Blast_Score=98, Evalue=2e-21,
Organism=Escherichia coli, GI1789453, Length=314, Percent_Identity=26.4331210191083, Blast_Score=88, Evalue=1e-18,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004089
- InterPro:   IPR003660 [H]

Pfam domain/function: PF00672 HAMP; PF00015 MCPsignal [H]

EC number: NA

Molecular weight: Translated: 59519; Mature: 59519

Theoretical pI: Translated: 4.93; Mature: 4.93

Prosite motif: PS50885 HAMP ; PS50111 CHEMOTAXIS_TRANSDUC_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFRFLNRFRISTKLVTATLGGMMFVVIMITSQIVGNASIDRDLNLAFDQQDIARLAMDTK
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEECHHHHHHHHHHHH
AAARQMQLAVRDIRLANSDAEIGAAEQRLADGRRAADEFCAEMTLKPASAETKARVQALQ
HHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHH
TAIEAYAGDAKRIVAIRQRIADDLAAGRSADTAAREAEAAALARNVTLPIAKTIDEVSDT
HHHHHHCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHH
IVSFASSKAAADKRAVWAVISKSETVSVAMGAIAVLVLAATGLMSVFAVSRPIGRMVQNM
HHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
TALAGGELQVSITGLERGDEVGDMARATQVFKTSLIETHRLRAEQVAAEARADAQRKQDV
HHHCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
DAFTAAFESAIGGIVDRVSSNSLSLEQAASTLANTASTTRELSTTVASASEEASASVQSV
HHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHH
AAATEEMAATAAEIGRQIEGASRVAQSAVAQATSTDQSMTKLAGAADKVGSIVGMITAIA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHH
QQTNLLALNATIEAARAGSAGRGFAIVASEVKELAAQTADATKDISGYIAEIQSAASTAV
HHCCEEEEECHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GAIKEIMSTIAGMSEITGAIAAAAEEQGNATKEISRNVQQAAVGASEVSSGIVEVQSGAT
HHHHHHHHHHHCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCHHHHHCCCEEECCCCC
HTGAASSQVLTAAQSLSADGLRLKQEVVSFLARVRTA
CCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MFRFLNRFRISTKLVTATLGGMMFVVIMITSQIVGNASIDRDLNLAFDQQDIARLAMDTK
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEECHHHHHHHHHHHH
AAARQMQLAVRDIRLANSDAEIGAAEQRLADGRRAADEFCAEMTLKPASAETKARVQALQ
HHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHH
TAIEAYAGDAKRIVAIRQRIADDLAAGRSADTAAREAEAAALARNVTLPIAKTIDEVSDT
HHHHHHCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHH
IVSFASSKAAADKRAVWAVISKSETVSVAMGAIAVLVLAATGLMSVFAVSRPIGRMVQNM
HHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
TALAGGELQVSITGLERGDEVGDMARATQVFKTSLIETHRLRAEQVAAEARADAQRKQDV
HHHCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
DAFTAAFESAIGGIVDRVSSNSLSLEQAASTLANTASTTRELSTTVASASEEASASVQSV
HHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHH
AAATEEMAATAAEIGRQIEGASRVAQSAVAQATSTDQSMTKLAGAADKVGSIVGMITAIA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHH
QQTNLLALNATIEAARAGSAGRGFAIVASEVKELAAQTADATKDISGYIAEIQSAASTAV
HHCCEEEEECHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GAIKEIMSTIAGMSEITGAIAAAAEEQGNATKEISRNVQQAAVGASEVSSGIVEVQSGAT
HHHHHHHHHHHCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCHHHHHCCCEEECCCCC
HTGAASSQVLTAAQSLSADGLRLKQEVVSFLARVRTA
CCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9163424 [H]