Definition | Bradyrhizobium sp. ORS278 chromosome, complete genome. |
---|---|
Accession | NC_009445 |
Length | 7,456,587 |
Click here to switch to the map view.
The map label for this gene is 146339029
Identifier: 146339029
GI number: 146339029
Start: 2104693
End: 2105709
Strand: Direct
Name: 146339029
Synonym: BRADO1978
Alternate gene names: NA
Gene position: 2104693-2105709 (Clockwise)
Preceding gene: 146339028
Following gene: 146339032
Centisome position: 28.23
GC content: 70.01
Gene sequence:
>1017_bases ATGACGATGATCGATGACATGGCCTCGCTGAAGCAGGCGATGGTCCAGATGGACTCGGAAGATGCGACCGTGGCGCAGAC CGGCAAGGATCGCGCCGCGCAGATCCTTGAGGCGTCCGGACTGAGCTTCGCGAAGCTTGCGGAACTGATCCAGCGTCGCC GGCTGCTGCTGCCGCCTTCGGTTCTCGGCCGGATCAAGCGCATGGATCAGCCGGGCACCCTCGGGGATTCGGCCTTCCGC GCCACGTGGGGGGTGCTCCGCAAGGAAGGCCAGAGCTTTCTTCAGATCGCCGAAGCCCTCGAAGTCAGTGGCGGACTCCG ACCTGGGGACGATGCCGAGGCCAGCGCGTTGCGGCAGCGGACCGCCCAGTTGTCCGCCGAAGCCGCGATGGATTCTGATG GGCGGACCCCGCCGACCGCGCTCACTTTGGCTTTAGACATTGTCACGTTTCCGCTCCGGCATCCCATTCGCTTTCTCACC GTTGCCGTGCTCGGGCTGGTGCTGTTCTACGGCTATCGCGGTGCCGTGACTCTGGGCCAGCAGGTCTCGAGCTTGTTCGA TGGTGCGGCTGCCCGGCGCGCATCGTCCGGCGCAGGCCCGGCGCCGCCGGCCTCGCCCGCCGTCACCCCGTCTCAGACCG CGTCGTCGCCAGCGACCGCGCCTCCGCCACCGGCCTCTGCCGCCACGCCATCGCCGATACCCGCGCCCACGGAACCTGCG CCGGCCGACCTGGCTCGCGCTCCTTCGCCGCCCGCGCCCGCGGCTCCCGCTTCTCCACCCGCCTCATCCTCGCGGCGCGA TGCGAGGATTGGGGCTCGATCGAGATTCGCGACGGAGTGCGGCGCGGCGCGGGACGGGTCATCGACCTGGTCCCGGCGCT GCCCGAGTGTCGGCGACGAGCGCCGTCCGCGCGCCTTCGAGGACATGGTCCCCGCGGCGATCCGGCGCGATTCGCGGCAG GCCGGACCCTGCATCGGCGGCGTGGGAGGTTGCTTCTGGGGCGGTTTGCAGCACTGA
Upstream 100 bases:
>100_bases CGAAACGGCGGTCAATGTCCGCTAGTCTGAGCCTCGAGCAAGTCTCGCGTGTGACGGCCCGACGCCGCACCGATGCCCGC TGTCGTCGGGAGTTTGATCG
Downstream 100 bases:
>100_bases CACGGCGGCGAGGCCGCGACGGCGCCTACGGCGTCATCGGCCGAGGCGCCCCAGCAAGCCGTGCTGCGTCCGAGGACTCC GTCAGCGGCGCGCTCGCGCA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 338; Mature: 337
Protein sequence:
>338_residues MTMIDDMASLKQAMVQMDSEDATVAQTGKDRAAQILEASGLSFAKLAELIQRRRLLLPPSVLGRIKRMDQPGTLGDSAFR ATWGVLRKEGQSFLQIAEALEVSGGLRPGDDAEASALRQRTAQLSAEAAMDSDGRTPPTALTLALDIVTFPLRHPIRFLT VAVLGLVLFYGYRGAVTLGQQVSSLFDGAAARRASSGAGPAPPASPAVTPSQTASSPATAPPPPASAATPSPIPAPTEPA PADLARAPSPPAPAAPASPPASSSRRDARIGARSRFATECGAARDGSSTWSRRCPSVGDERRPRAFEDMVPAAIRRDSRQ AGPCIGGVGGCFWGGLQH
Sequences:
>Translated_338_residues MTMIDDMASLKQAMVQMDSEDATVAQTGKDRAAQILEASGLSFAKLAELIQRRRLLLPPSVLGRIKRMDQPGTLGDSAFR ATWGVLRKEGQSFLQIAEALEVSGGLRPGDDAEASALRQRTAQLSAEAAMDSDGRTPPTALTLALDIVTFPLRHPIRFLT VAVLGLVLFYGYRGAVTLGQQVSSLFDGAAARRASSGAGPAPPASPAVTPSQTASSPATAPPPPASAATPSPIPAPTEPA PADLARAPSPPAPAAPASPPASSSRRDARIGARSRFATECGAARDGSSTWSRRCPSVGDERRPRAFEDMVPAAIRRDSRQ AGPCIGGVGGCFWGGLQH >Mature_337_residues TMIDDMASLKQAMVQMDSEDATVAQTGKDRAAQILEASGLSFAKLAELIQRRRLLLPPSVLGRIKRMDQPGTLGDSAFRA TWGVLRKEGQSFLQIAEALEVSGGLRPGDDAEASALRQRTAQLSAEAAMDSDGRTPPTALTLALDIVTFPLRHPIRFLTV AVLGLVLFYGYRGAVTLGQQVSSLFDGAAARRASSGAGPAPPASPAVTPSQTASSPATAPPPPASAATPSPIPAPTEPAP ADLARAPSPPAPAAPASPPASSSRRDARIGARSRFATECGAARDGSSTWSRRCPSVGDERRPRAFEDMVPAAIRRDSRQA GPCIGGVGGCFWGGLQH
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 35121; Mature: 34990
Theoretical pI: Translated: 9.82; Mature: 9.82
Prosite motif: PS00687 ALDEHYDE_DEHYDR_GLU
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTMIDDMASLKQAMVQMDSEDATVAQTGKDRAAQILEASGLSFAKLAELIQRRRLLLPPS CCCHHHHHHHHHHHHHCCCCCCHHHHCCHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCHH VLGRIKRMDQPGTLGDSAFRATWGVLRKEGQSFLQIAEALEVSGGLRPGDDAEASALRQR HHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHH TAQLSAEAAMDSDGRTPPTALTLALDIVTFPLRHPIRFLTVAVLGLVLFYGYRGAVTLGQ HHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHH QVSSLFDGAAARRASSGAGPAPPASPAVTPSQTASSPATAPPPPASAATPSPIPAPTEPA HHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC PADLARAPSPPAPAAPASPPASSSRRDARIGARSRFATECGAARDGSSTWSRRCPSVGDE CHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCHHHHCCCCCCCC RRPRAFEDMVPAAIRRDSRQAGPCIGGVGGCFWGGLQH CCCHHHHHHHHHHHHHCCHHCCCCCCCHHHHHHCCCCC >Mature Secondary Structure TMIDDMASLKQAMVQMDSEDATVAQTGKDRAAQILEASGLSFAKLAELIQRRRLLLPPS CCHHHHHHHHHHHHHCCCCCCHHHHCCHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCHH VLGRIKRMDQPGTLGDSAFRATWGVLRKEGQSFLQIAEALEVSGGLRPGDDAEASALRQR HHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHH TAQLSAEAAMDSDGRTPPTALTLALDIVTFPLRHPIRFLTVAVLGLVLFYGYRGAVTLGQ HHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHH QVSSLFDGAAARRASSGAGPAPPASPAVTPSQTASSPATAPPPPASAATPSPIPAPTEPA HHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC PADLARAPSPPAPAAPASPPASSSRRDARIGARSRFATECGAARDGSSTWSRRCPSVGDE CHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCHHHHCCCCCCCC RRPRAFEDMVPAAIRRDSRQAGPCIGGVGGCFWGGLQH CCCHHHHHHHHHHHHHCCHHCCCCCCCHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA