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The map label for this gene is 146339002

Identifier: 146339002

GI number: 146339002

Start: 2074876

End: 2076321

Strand: Reverse

Name: 146339002

Synonym: BRADO1951

Alternate gene names: NA

Gene position: 2076321-2074876 (Counterclockwise)

Preceding gene: 146339005

Following gene: 146339000

Centisome position: 27.85

GC content: 67.36

Gene sequence:

>1446_bases
ATGCCCGGTGAATCGGGAAAGAAGCTGTTCGTCGGGCCGCGCTTCCGCCGCATCCGCCAGCAGCTCGGGCTGTCCCAGAC
CCAGCTTGCCGAGGGTCTCGGCATCTCGCCGAGCTACGTCAACCTGATCGAGCGCAACCAGCGCCCGGTGTCCGCCCAGA
TCCTGCTGCGGCTGGCGGAGGTCTACGACCTCGATTTGCGCGACCTCGCCACCGCCGACGAGGACCGCTTCTTCGCCGAG
CTCAACGAGATCTTCTCCGATCCCTTGTTCCGCCAGATCGAGCTGCCCAAGCAGGAGCTGCGCGACCTCGCCGAGCTCTG
CCCCGGCGTCACCCACGCGCTGCAGCGGCTGTACGCGGCTTATGCCGAGGCGCGGCGCGGCGAGACGCTGGTGGCGGCGC
AGATGGCCGACCGCAATGCCGGCGGCCATTTCGAGGCCAACCCGATCGAGCGGGTACGCGACCTGATCGAGGCCAACCGC
AACTACTTTCCCGAGCTCGAGCAGCAGGCCGAAGCCCTGCGCGACGCGCTCGACGTGCCTGCCGAGGGACTGTACGCCGC
GCTCGCCACGCGGCTGCGCGAAAAACATTCGGTGCAGACCCGGGTGATGCCGGTCGACGTGATGCGCGAGACCTTGCGGC
GTTACGACCGCCATCGTCGTCAGTTGCTGATCTCCGAACTCGTCGACGGTCCCGGCCGCACCTTCCAACTTGCCGTGCAG
CTCGGCATGGCCGAGTGCCTGCCGCAGTTCGAGATCATCATCGGCCGCGCCGGGGCGATCGACGACACCTCGCGCCGGCT
CTACCGCATGACGCTGGCGAGCTACTACGCCGCCGCCGTCATGATGCCCTACGCGCCGTTCCTCACTGCTGCGGAAGCGC
TGAGCTACGACATCAACGTTCTGGCGCAGCGCTTCAGCACCGGCTTCGAGCAGGTCTGTCACCGCCTCACCACCTTGTCG
CGGCCGAACGCGCGCGGCATTCCGTTCTTCATGCTGCGCGTCGACAATGCCGGCAACGTCTCCAAGCGCTTTTCCTCGGG
CACCTTCCCGTTCTCCAAGTTCGGCGGCACCTGCCCGCTGTGGAACGTGCATTCGACCTTCGACACGCCCGATCGGCTGT
TGAAGCAGATCATCGAGCTGCCGGACGGCTCGCGCTATTTCTCGATCGCCCAGATGGTTCGCCGCCCCGTGGCGCCGCAT
CCGCTGCCGCAGCCGCGCTTCGCCATTGGCCTCGGTTGCGAGATCCGCCACGCCTCGCGCCTGGTCTACGCCGCCGGCAT
GGACCTGGAGAAAACCGAGGGCACCCCGATCGGCGTCAACTGCCGGCTCTGCGAGCGCGAAAACTGCGCCCAGCGCGCCG
AGCCGCCGATCACGCGCACGCTGATCCTGGACGAGACCACGCGCCGCGTCAGCTCGTTCGCGTTCAGCAATGCAAGGGAG
TTGTGA

Upstream 100 bases:

>100_bases
TTTCCGAATGGTGATGTCATGTAACATCATCACTTGTAACAAATGTCATTTTGTAAATTTTGTCAAAAATCCTGGGCCGA
GCGGCCCGTTGGAGGTTGCG

Downstream 100 bases:

>100_bases
GGCCGCCACCGTGTCCTCCGTCGTTCCGGGGCGCGCGAAAGCGCGAGCCCGGACTCCATTTGGCGACGACACCTGCGGCC
CGATGGATTCCGGGCTCGCG

Product: XRE family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 481; Mature: 480

Protein sequence:

>481_residues
MPGESGKKLFVGPRFRRIRQQLGLSQTQLAEGLGISPSYVNLIERNQRPVSAQILLRLAEVYDLDLRDLATADEDRFFAE
LNEIFSDPLFRQIELPKQELRDLAELCPGVTHALQRLYAAYAEARRGETLVAAQMADRNAGGHFEANPIERVRDLIEANR
NYFPELEQQAEALRDALDVPAEGLYAALATRLREKHSVQTRVMPVDVMRETLRRYDRHRRQLLISELVDGPGRTFQLAVQ
LGMAECLPQFEIIIGRAGAIDDTSRRLYRMTLASYYAAAVMMPYAPFLTAAEALSYDINVLAQRFSTGFEQVCHRLTTLS
RPNARGIPFFMLRVDNAGNVSKRFSSGTFPFSKFGGTCPLWNVHSTFDTPDRLLKQIIELPDGSRYFSIAQMVRRPVAPH
PLPQPRFAIGLGCEIRHASRLVYAAGMDLEKTEGTPIGVNCRLCERENCAQRAEPPITRTLILDETTRRVSSFAFSNARE
L

Sequences:

>Translated_481_residues
MPGESGKKLFVGPRFRRIRQQLGLSQTQLAEGLGISPSYVNLIERNQRPVSAQILLRLAEVYDLDLRDLATADEDRFFAE
LNEIFSDPLFRQIELPKQELRDLAELCPGVTHALQRLYAAYAEARRGETLVAAQMADRNAGGHFEANPIERVRDLIEANR
NYFPELEQQAEALRDALDVPAEGLYAALATRLREKHSVQTRVMPVDVMRETLRRYDRHRRQLLISELVDGPGRTFQLAVQ
LGMAECLPQFEIIIGRAGAIDDTSRRLYRMTLASYYAAAVMMPYAPFLTAAEALSYDINVLAQRFSTGFEQVCHRLTTLS
RPNARGIPFFMLRVDNAGNVSKRFSSGTFPFSKFGGTCPLWNVHSTFDTPDRLLKQIIELPDGSRYFSIAQMVRRPVAPH
PLPQPRFAIGLGCEIRHASRLVYAAGMDLEKTEGTPIGVNCRLCERENCAQRAEPPITRTLILDETTRRVSSFAFSNARE
L
>Mature_480_residues
PGESGKKLFVGPRFRRIRQQLGLSQTQLAEGLGISPSYVNLIERNQRPVSAQILLRLAEVYDLDLRDLATADEDRFFAEL
NEIFSDPLFRQIELPKQELRDLAELCPGVTHALQRLYAAYAEARRGETLVAAQMADRNAGGHFEANPIERVRDLIEANRN
YFPELEQQAEALRDALDVPAEGLYAALATRLREKHSVQTRVMPVDVMRETLRRYDRHRRQLLISELVDGPGRTFQLAVQL
GMAECLPQFEIIIGRAGAIDDTSRRLYRMTLASYYAAAVMMPYAPFLTAAEALSYDINVLAQRFSTGFEQVCHRLTTLSR
PNARGIPFFMLRVDNAGNVSKRFSSGTFPFSKFGGTCPLWNVHSTFDTPDRLLKQIIELPDGSRYFSIAQMVRRPVAPHP
LPQPRFAIGLGCEIRHASRLVYAAGMDLEKTEGTPIGVNCRLCERENCAQRAEPPITRTLILDETTRRVSSFAFSNAREL

Specific function: Unknown

COG id: COG3800

COG function: function code R; Predicted transcriptional regulator

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH cro/C1-type DNA-binding domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR018653
- InterPro:   IPR010359
- InterPro:   IPR001387
- InterPro:   IPR010982 [H]

Pfam domain/function: PF09856 DUF2083; PF06114 DUF955; PF01381 HTH_3 [H]

EC number: NA

Molecular weight: Translated: 54304; Mature: 54173

Theoretical pI: Translated: 8.20; Mature: 8.20

Prosite motif: PS50943 HTH_CROC1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPGESGKKLFVGPRFRRIRQQLGLSQTQLAEGLGISPSYVNLIERNQRPVSAQILLRLAE
CCCCCCCEEEECHHHHHHHHHHCCCHHHHHHCCCCCHHHHHHHHCCCCCHHHHHHHHHHH
VYDLDLRDLATADEDRFFAELNEIFSDPLFRQIELPKQELRDLAELCPGVTHALQRLYAA
HHCCCHHHHHCCCHHHHHHHHHHHHCCHHHHHHCCCHHHHHHHHHHCCHHHHHHHHHHHH
YAEARRGETLVAAQMADRNAGGHFEANPIERVRDLIEANRNYFPELEQQAEALRDALDVP
HHHHHCCCEEEEHHHHCCCCCCCCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCC
AEGLYAALATRLREKHSVQTRVMPVDVMRETLRRYDRHRRQLLISELVDGPGRTFQLAVQ
HHHHHHHHHHHHHHHHCHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEHHHHH
LGMAECLPQFEIIIGRAGAIDDTSRRLYRMTLASYYAAAVMMPYAPFLTAAEALSYDINV
HHHHHHCCHHHHEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LAQRFSTGFEQVCHRLTTLSRPNARGIPFFMLRVDNAGNVSKRFSSGTFPFSKFGGTCPL
HHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEECCCCCHHHHHCCCCCCHHHCCCCCCC
WNVHSTFDTPDRLLKQIIELPDGSRYFSIAQMVRRPVAPHPLPQPRFAIGLGCEIRHASR
CCCCCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCCCCCCCEEEECCCCHHHHHH
LVYAAGMDLEKTEGTPIGVNCRLCERENCAQRAEPPITRTLILDETTRRVSSFAFSNARE
HHHHCCCCCCCCCCCCCCCEEEECCHHCHHHHCCCCCEEEEEECHHHHHHHHHHHHHCCC
L
C
>Mature Secondary Structure 
PGESGKKLFVGPRFRRIRQQLGLSQTQLAEGLGISPSYVNLIERNQRPVSAQILLRLAE
CCCCCCEEEECHHHHHHHHHHCCCHHHHHHCCCCCHHHHHHHHCCCCCHHHHHHHHHHH
VYDLDLRDLATADEDRFFAELNEIFSDPLFRQIELPKQELRDLAELCPGVTHALQRLYAA
HHCCCHHHHHCCCHHHHHHHHHHHHCCHHHHHHCCCHHHHHHHHHHCCHHHHHHHHHHHH
YAEARRGETLVAAQMADRNAGGHFEANPIERVRDLIEANRNYFPELEQQAEALRDALDVP
HHHHHCCCEEEEHHHHCCCCCCCCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCC
AEGLYAALATRLREKHSVQTRVMPVDVMRETLRRYDRHRRQLLISELVDGPGRTFQLAVQ
HHHHHHHHHHHHHHHHCHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEHHHHH
LGMAECLPQFEIIIGRAGAIDDTSRRLYRMTLASYYAAAVMMPYAPFLTAAEALSYDINV
HHHHHHCCHHHHEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LAQRFSTGFEQVCHRLTTLSRPNARGIPFFMLRVDNAGNVSKRFSSGTFPFSKFGGTCPL
HHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEECCCCCHHHHHCCCCCCHHHCCCCCCC
WNVHSTFDTPDRLLKQIIELPDGSRYFSIAQMVRRPVAPHPLPQPRFAIGLGCEIRHASR
CCCCCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCCCCCCCEEEECCCCHHHHHH
LVYAAGMDLEKTEGTPIGVNCRLCERENCAQRAEPPITRTLILDETTRRVSSFAFSNARE
HHHHCCCCCCCCCCCCCCCEEEECCHHCHHHHCCCCCEEEEEECHHHHHHHHHHHHHCCC
L
C

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9634230; 12218036 [H]