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The map label for this gene is rbsC [H]

Identifier: 146338983

GI number: 146338983

Start: 2053740

End: 2054717

Strand: Direct

Name: rbsC [H]

Synonym: BRADO1930

Alternate gene names: 146338983

Gene position: 2053740-2054717 (Clockwise)

Preceding gene: 146338982

Following gene: 146338991

Centisome position: 27.54

GC content: 68.61

Gene sequence:

>978_bases
ATGCGCAGCCATGAAGGATGCGCAGCCATGAAGGGCACGCTCGCCGGCGTTCTCGCCCGGCCGTGGATATGGTCGTTCAT
CGGCGCGCTCGCGGTGTGGCTGGCCGCCATCACCTTCACCGGCGGCACCGGCGCCGGCGGCATGTTGACGGCGGCGCTGT
CGCTCGCGGTGTTCACGGTCGTGGTAGGCGTCGGCCAGATGTTCGTGATCACGCTCGGTCCCGGCAACGTCGACCTGTCG
TTGCCGGCCAATATCGGGCTGGCCAGCGCGGTGGCGATGACGGTCATGGCCGGCGACGACCAGCGCATTGCGTTTGGGCT
GCTTGCCGCGCTCGCCTGCGGCGCCGCGATCGGCACGGCCAACTATCTCCTGATCTGGGCGTTGCGGATCCCGCCGATCA
TCGCCACGCTCTCGGCGAGCTTCGTCATCCAGTCGATCGACATCAGCTATGGCCGCGGGCTGCAGATCAAGCCGCCGCCG
GGCTTCGCCGATTTCACCAACATCCAGCTGTTCGGTATCCCGCTGCTCGCCGTGCTGACCGTGCTGTTCATGATCGGCGC
GCATGTGGTGCTGCAGCGGACGGTGTTCGGCCGGTCGGTGCTGGCGATCGGGCAGAACATGCGCGCCGCGCGGCTGGCCG
GCATCGCCGTCAACCGGGTGCGCTTCGCCACCTACGTGCTGTGCGGCACGCTCGGCGGCATCAACGGTGCGCTGCTGGCC
GGCTACTTCCGCGGCGCCAATGTCGACATCGGCAACGAGTATCTGCTCGCCTCGATCGCCGTCGTCGTGATCGGCGGCAC
CTCGGTCGCGGGCGGCAAGGCCAACATTCCCGGCCTGTTCGGCGCCGCGATGTTCCTGGTGCTGCTGCTGACCATGCTCA
ACACCTTCGGCGTCAGCGCCGGCGTCCGCCTGCTGCTGACCGGGCTGATCATCGTCGCGGTGATCACGGCGGCCGGCGGG
ACGAAGCGGGAGCGGTGA

Upstream 100 bases:

>100_bases
CTGTTGACCTTCATGCGGATTCCGCCGGACTGGCAGGTCGCCGCCAACGGCGCCATCCTGATCGTCGTGCTCGCCGCGCG
CGTGCTGATCAGCCGCAAGG

Downstream 100 bases:

>100_bases
ATGTCTTGAATGGCCCATGTCGCCGCGAACGGCACGATTTCAGGAAATCTTGTCTGAGGCAGACGAGTCGCCACGAGCCG
CAGCGGGTCGCCCGCTGCGG

Product: putative ribose ABC transporter permease

Products: ADP; phosphate; ribose [Cytoplasm] [C]

Alternate protein names: NA

Number of amino acids: Translated: 325; Mature: 325

Protein sequence:

>325_residues
MRSHEGCAAMKGTLAGVLARPWIWSFIGALAVWLAAITFTGGTGAGGMLTAALSLAVFTVVVGVGQMFVITLGPGNVDLS
LPANIGLASAVAMTVMAGDDQRIAFGLLAALACGAAIGTANYLLIWALRIPPIIATLSASFVIQSIDISYGRGLQIKPPP
GFADFTNIQLFGIPLLAVLTVLFMIGAHVVLQRTVFGRSVLAIGQNMRAARLAGIAVNRVRFATYVLCGTLGGINGALLA
GYFRGANVDIGNEYLLASIAVVVIGGTSVAGGKANIPGLFGAAMFLVLLLTMLNTFGVSAGVRLLLTGLIIVAVITAAGG
TKRER

Sequences:

>Translated_325_residues
MRSHEGCAAMKGTLAGVLARPWIWSFIGALAVWLAAITFTGGTGAGGMLTAALSLAVFTVVVGVGQMFVITLGPGNVDLS
LPANIGLASAVAMTVMAGDDQRIAFGLLAALACGAAIGTANYLLIWALRIPPIIATLSASFVIQSIDISYGRGLQIKPPP
GFADFTNIQLFGIPLLAVLTVLFMIGAHVVLQRTVFGRSVLAIGQNMRAARLAGIAVNRVRFATYVLCGTLGGINGALLA
GYFRGANVDIGNEYLLASIAVVVIGGTSVAGGKANIPGLFGAAMFLVLLLTMLNTFGVSAGVRLLLTGLIIVAVITAAGG
TKRER
>Mature_325_residues
MRSHEGCAAMKGTLAGVLARPWIWSFIGALAVWLAAITFTGGTGAGGMLTAALSLAVFTVVVGVGQMFVITLGPGNVDLS
LPANIGLASAVAMTVMAGDDQRIAFGLLAALACGAAIGTANYLLIWALRIPPIIATLSASFVIQSIDISYGRGLQIKPPP
GFADFTNIQLFGIPLLAVLTVLFMIGAHVVLQRTVFGRSVLAIGQNMRAARLAGIAVNRVRFATYVLCGTLGGINGALLA
GYFRGANVDIGNEYLLASIAVVVIGGTSVAGGKANIPGLFGAAMFLVLLLTMLNTFGVSAGVRLLLTGLIIVAVITAAGG
TKRER

Specific function: Part of the binding-protein-dependent transport system for ribose. Probably responsible for the translocation of the substrate across the membrane [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the binding-protein-dependent transport system permease family. AraH/rbsC subfamily [H]

Homologues:

Organism=Escherichia coli, GI1790191, Length=193, Percent_Identity=32.1243523316062, Blast_Score=82, Evalue=5e-17,
Organism=Escherichia coli, GI1787794, Length=168, Percent_Identity=32.1428571428571, Blast_Score=79, Evalue=3e-16,
Organism=Escherichia coli, GI145693152, Length=258, Percent_Identity=31.0077519379845, Blast_Score=78, Evalue=6e-16,
Organism=Escherichia coli, GI1788896, Length=154, Percent_Identity=32.4675324675325, Blast_Score=72, Evalue=6e-14,
Organism=Escherichia coli, GI1789992, Length=139, Percent_Identity=33.0935251798561, Blast_Score=68, Evalue=1e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001851 [H]

Pfam domain/function: PF02653 BPD_transp_2 [H]

EC number: NA

Molecular weight: Translated: 33242; Mature: 33242

Theoretical pI: Translated: 10.71; Mature: 10.71

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRSHEGCAAMKGTLAGVLARPWIWSFIGALAVWLAAITFTGGTGAGGMLTAALSLAVFTV
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHH
VVGVGQMFVITLGPGNVDLSLPANIGLASAVAMTVMAGDDQRIAFGLLAALACGAAIGTA
HHHCCCEEEEEECCCCEEEECCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCC
NYLLIWALRIPPIIATLSASFVIQSIDISYGRGLQIKPPPGFADFTNIQLFGIPLLAVLT
CEEEEEEHHCCHHHHHHHHHHHHEEEECCCCCCEEECCCCCCCCCCCEEEECCCHHHHHH
VLFMIGAHVVLQRTVFGRSVLAIGQNMRAARLAGIAVNRVRFATYVLCGTLGGINGALLA
HHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHH
GYFRGANVDIGNEYLLASIAVVVIGGTSVAGGKANIPGLFGAAMFLVLLLTMLNTFGVSA
HHHCCCCCCCCCHHHHHHEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCHHH
GVRLLLTGLIIVAVITAAGGTKRER
HHHHHHHHHHHHHHHHHCCCCCCCC
>Mature Secondary Structure
MRSHEGCAAMKGTLAGVLARPWIWSFIGALAVWLAAITFTGGTGAGGMLTAALSLAVFTV
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHH
VVGVGQMFVITLGPGNVDLSLPANIGLASAVAMTVMAGDDQRIAFGLLAALACGAAIGTA
HHHCCCEEEEEECCCCEEEECCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCC
NYLLIWALRIPPIIATLSASFVIQSIDISYGRGLQIKPPPGFADFTNIQLFGIPLLAVLT
CEEEEEEHHCCHHHHHHHHHHHHEEEECCCCCCEEECCCCCCCCCCCEEEECCCHHHHHH
VLFMIGAHVVLQRTVFGRSVLAIGQNMRAARLAGIAVNRVRFATYVLCGTLGGINGALLA
HHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHH
GYFRGANVDIGNEYLLASIAVVVIGGTSVAGGKANIPGLFGAAMFLVLLLTMLNTFGVSA
HHHCCCCCCCCCHHHHHHEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCHHH
GVRLLLTGLIIVAVITAAGGTKRER
HHHHHHHHHHHHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ATP; ribose [Periplasm]; H2O [C]

Specific reaction: ATP + ribose [Periplasm] + H2O = ADP + phosphate + ribose [Cytoplasm] [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 7921236; 9353933; 9384377 [H]