Definition Bradyrhizobium sp. ORS278 chromosome, complete genome.
Accession NC_009445
Length 7,456,587

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The map label for this gene is 146338970

Identifier: 146338970

GI number: 146338970

Start: 2038383

End: 2040125

Strand: Direct

Name: 146338970

Synonym: BRADO1914

Alternate gene names: NA

Gene position: 2038383-2040125 (Clockwise)

Preceding gene: 146338969

Following gene: 146338971

Centisome position: 27.34

GC content: 63.28

Gene sequence:

>1743_bases
ATGACCAGCGCGGTCGCGCTGTTCGCCGCGACCATGACGTTGTCCCTGCCGGCGCGTTCGGACGACGCCACGATCCAGAA
GTGGATCGACAGCGAATTCCAGCCGTCGACCTTGTCGAAGGAAGAGCAGCTCAAGGAGCTGCAATGGTTCGCCAAGGCCG
CCGAGCCCTTCAAGGGCATGGAGATCAACGTCGTCTCCGAGACCATCACGACTCACGAATACGAGTCGAAGACCCTCGCC
AAGGCCTTCACCGAGATCACCGGCATCAAGCTCAAGCACGACATCATCCAGGAAGGTGACGTCGTCGAGAAGCTGCAGAC
CCAAATGCAGTCCGGCAAGAACGTCTATGACGGCTGGATCAACGACTCCGACCTGATCGGCACCCACTTCCGCTACGGCC
AGACCATCGCGCTCTCGGACTACATGAAGGGCGAGGGCAAGGACGTCACCGATCCGTATCTCGACGTCAACGACTTCATC
GGCAAGTCGTTCACGACCGCGCCGGACGGCAAGCTCTATCAGCTGCCCGACCAGCAGTTCGCGAACCTCTATTGGTTCCG
CTACGACTGGTTCACCAACCCGGACTACAAGGCCAAGTTCAAGGCCAAGTACGGCTATGACCTCGGCGTGCCGGTGAACT
GGTCGGCCTACGAGGACATCGCCGAGTTCTTCACGAACGACATCAAGGAGATCAACGGCGTCAAGGTCTATGGCCACATG
GACTACGGCAAGAAGGATCCCTCGCTCGGCTGGCGCTTCACCGACGCCTGGCTGTCGATGGCCGGCAACGGCGACAAGGG
CATCCCGAACGGCCTGCCGGTCGACGAATGGGGCATCCGCATGGAAGGCTGCCGTCCGGTCGGCTCCTCGGTCGAGCGTG
GTGGCGACACCAACGGCCCCGCCGCCGTCTACTCGATCACCAAGTATCTCGACTGGATGAAGAAGTACGCGCCGCCGCAG
GCGCAGGGCATGACCTTCTCCGAGGCCGGCCCGGTCCCGGCGCAGGGCAACGTCGCCCAGCAGATCTTCTGGTACACCGC
CTTCACCGCCGACATGGTGAAGCCCGGCCTGCCGGTGGTGAACGCGGACGGCACGCCGAAGTGGCGCATGGCTCCGTCGC
CGCACGGCGCCTACTGGAAGGACGGCATGAAGCTCGGCTATCAGGACGCCGGCTCGCTGACGCTCCTGAAGTCGACCCCG
CCGGATCGCCGCAAGGCCGCCTGGCTGTACCTGCAGTTCATCGTCTCCAAGTCGGTGAGCTTGAAGAAGAGCCATGTCGG
TCTCACCTTCATTCGTGAATCCGACATCTGGGACAAGTCGTTCACCGAGCGTGCGCCGAAGCTCGGCGGCCTGATCGAGT
TCTACCGCTCGCCCGCGCGCGTGCAGTGGACCCCGACCGGCAACAACGTGCCCGACTATCCGAAGCTCGCGCAGCTGTGG
TGGCAGAACATCGGCGATGCGTCGTCCGGTGCGAAGACCCCGCAGGCTGCGATGGACGCGCTCGCGGCCGCTCAGGACTC
CGTCCTCGAGCGTCTCGAGAAGTCCAAGGTCCAGGGTGACTGCGGTCCGAAGCTGAACAAGAAGGAATCGGCCGAGTTCT
GGTTCAACAAGTCGGCGAAGGACGGCAACATCGCTCCGCAGCGCAAGCTCGCGAACGAGAAGCCGAAGGGCGAGACGATC
GACTACGACACGCTGATCAAGTCGTGGCCGGCGACCCCGCCCAAGCGCGCCGAAGCCAAGTAA

Upstream 100 bases:

>100_bases
GACAAACCCGGACCTGGGGTACGTCTGTCGCTGCAAGGAGGAAACCATGCGACACTTGAAACGTAGGAAGCATCACCCGA
GCAAGGCCGGGTATCTGGCG

Downstream 100 bases:

>100_bases
GCGGTTTCACAATGATCGCCCGGCTCGGCCGGGCGGTCCCCTCCTTGAGGCCGGGAGCAATCCCGGCCTTTTCTTTTGTG
GCAATGCGATCAGCTCTCGT

Product: putative periplasmic binding ABC transporter protein, sugar binding signal peptide

Products: NA

Alternate protein names: ABC-Type Sugar Transport System Periplasmic Component; Sugar ABC Transporter; Twin-Arginine Translocation Pathway Signal; Abc-Type Sugar Transport System Periplasmic Component

Number of amino acids: Translated: 580; Mature: 579

Protein sequence:

>580_residues
MTSAVALFAATMTLSLPARSDDATIQKWIDSEFQPSTLSKEEQLKELQWFAKAAEPFKGMEINVVSETITTHEYESKTLA
KAFTEITGIKLKHDIIQEGDVVEKLQTQMQSGKNVYDGWINDSDLIGTHFRYGQTIALSDYMKGEGKDVTDPYLDVNDFI
GKSFTTAPDGKLYQLPDQQFANLYWFRYDWFTNPDYKAKFKAKYGYDLGVPVNWSAYEDIAEFFTNDIKEINGVKVYGHM
DYGKKDPSLGWRFTDAWLSMAGNGDKGIPNGLPVDEWGIRMEGCRPVGSSVERGGDTNGPAAVYSITKYLDWMKKYAPPQ
AQGMTFSEAGPVPAQGNVAQQIFWYTAFTADMVKPGLPVVNADGTPKWRMAPSPHGAYWKDGMKLGYQDAGSLTLLKSTP
PDRRKAAWLYLQFIVSKSVSLKKSHVGLTFIRESDIWDKSFTERAPKLGGLIEFYRSPARVQWTPTGNNVPDYPKLAQLW
WQNIGDASSGAKTPQAAMDALAAAQDSVLERLEKSKVQGDCGPKLNKKESAEFWFNKSAKDGNIAPQRKLANEKPKGETI
DYDTLIKSWPATPPKRAEAK

Sequences:

>Translated_580_residues
MTSAVALFAATMTLSLPARSDDATIQKWIDSEFQPSTLSKEEQLKELQWFAKAAEPFKGMEINVVSETITTHEYESKTLA
KAFTEITGIKLKHDIIQEGDVVEKLQTQMQSGKNVYDGWINDSDLIGTHFRYGQTIALSDYMKGEGKDVTDPYLDVNDFI
GKSFTTAPDGKLYQLPDQQFANLYWFRYDWFTNPDYKAKFKAKYGYDLGVPVNWSAYEDIAEFFTNDIKEINGVKVYGHM
DYGKKDPSLGWRFTDAWLSMAGNGDKGIPNGLPVDEWGIRMEGCRPVGSSVERGGDTNGPAAVYSITKYLDWMKKYAPPQ
AQGMTFSEAGPVPAQGNVAQQIFWYTAFTADMVKPGLPVVNADGTPKWRMAPSPHGAYWKDGMKLGYQDAGSLTLLKSTP
PDRRKAAWLYLQFIVSKSVSLKKSHVGLTFIRESDIWDKSFTERAPKLGGLIEFYRSPARVQWTPTGNNVPDYPKLAQLW
WQNIGDASSGAKTPQAAMDALAAAQDSVLERLEKSKVQGDCGPKLNKKESAEFWFNKSAKDGNIAPQRKLANEKPKGETI
DYDTLIKSWPATPPKRAEAK
>Mature_579_residues
TSAVALFAATMTLSLPARSDDATIQKWIDSEFQPSTLSKEEQLKELQWFAKAAEPFKGMEINVVSETITTHEYESKTLAK
AFTEITGIKLKHDIIQEGDVVEKLQTQMQSGKNVYDGWINDSDLIGTHFRYGQTIALSDYMKGEGKDVTDPYLDVNDFIG
KSFTTAPDGKLYQLPDQQFANLYWFRYDWFTNPDYKAKFKAKYGYDLGVPVNWSAYEDIAEFFTNDIKEINGVKVYGHMD
YGKKDPSLGWRFTDAWLSMAGNGDKGIPNGLPVDEWGIRMEGCRPVGSSVERGGDTNGPAAVYSITKYLDWMKKYAPPQA
QGMTFSEAGPVPAQGNVAQQIFWYTAFTADMVKPGLPVVNADGTPKWRMAPSPHGAYWKDGMKLGYQDAGSLTLLKSTPP
DRRKAAWLYLQFIVSKSVSLKKSHVGLTFIRESDIWDKSFTERAPKLGGLIEFYRSPARVQWTPTGNNVPDYPKLAQLWW
QNIGDASSGAKTPQAAMDALAAAQDSVLERLEKSKVQGDCGPKLNKKESAEFWFNKSAKDGNIAPQRKLANEKPKGETID
YDTLIKSWPATPPKRAEAK

Specific function: Unknown

COG id: COG1653

COG function: function code G; ABC-type sugar transport system, periplasmic component

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 64847; Mature: 64715

Theoretical pI: Translated: 6.81; Mature: 6.81

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTSAVALFAATMTLSLPARSDDATIQKWIDSEFQPSTLSKEEQLKELQWFAKAAEPFKGM
CCCHHHHHHHHHEEECCCCCCHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCC
EINVVSETITTHEYESKTLAKAFTEITGIKLKHDIIQEGDVVEKLQTQMQSGKNVYDGWI
EEEEEHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHCCCHHHHHHHHHHHCCCEEECCCC
NDSDLIGTHFRYGQTIALSDYMKGEGKDVTDPYLDVNDFIGKSFTTAPDGKLYQLPDQQF
CCCCCCCCHHHCCCEEEEHHHHCCCCCCCCCCCCCHHHHHCCCCCCCCCCCEEECCCHHH
ANLYWFRYDWFTNPDYKAKFKAKYGYDLGVPVNWSAYEDIAEFFTNDIKEINGVKVYGHM
CCEEEEEEECCCCCCCCEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEEC
DYGKKDPSLGWRFTDAWLSMAGNGDKGIPNGLPVDEWGIRMEGCRPVGSSVERGGDTNGP
CCCCCCCCCCCEEHHHHHHHCCCCCCCCCCCCCCHHHCCEECCCCCCCCHHHCCCCCCCC
AAVYSITKYLDWMKKYAPPQAQGMTFSEAGPVPAQGNVAQQIFWYTAFTADMVKPGLPVV
HHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCEE
NADGTPKWRMAPSPHGAYWKDGMKLGYQDAGSLTLLKSTPPDRRKAAWLYLQFIVSKSVS
ECCCCCCEECCCCCCCCHHHCCCEECCCCCCCEEEEECCCCCHHHHHHHHHHHHHHCCCC
LKKSHVGLTFIRESDIWDKSFTERAPKLGGLIEFYRSPARVQWTPTGNNVPDYPKLAQLW
EECCCCCEEEEECCCCCCHHHHHHCCHHHHHHHHHCCCCEEEEECCCCCCCCCHHHHHHH
WQNIGDASSGAKTPQAAMDALAAAQDSVLERLEKSKVQGDCGPKLNKKESAEFWFNKSAK
HHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHCCCCCC
DGNIAPQRKLANEKPKGETIDYDTLIKSWPATPPKRAEAK
CCCCCCHHHHCCCCCCCCCCCHHHHHHHCCCCCCCCCCCC
>Mature Secondary Structure 
TSAVALFAATMTLSLPARSDDATIQKWIDSEFQPSTLSKEEQLKELQWFAKAAEPFKGM
CCHHHHHHHHHEEECCCCCCHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCC
EINVVSETITTHEYESKTLAKAFTEITGIKLKHDIIQEGDVVEKLQTQMQSGKNVYDGWI
EEEEEHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHCCCHHHHHHHHHHHCCCEEECCCC
NDSDLIGTHFRYGQTIALSDYMKGEGKDVTDPYLDVNDFIGKSFTTAPDGKLYQLPDQQF
CCCCCCCCHHHCCCEEEEHHHHCCCCCCCCCCCCCHHHHHCCCCCCCCCCCEEECCCHHH
ANLYWFRYDWFTNPDYKAKFKAKYGYDLGVPVNWSAYEDIAEFFTNDIKEINGVKVYGHM
CCEEEEEEECCCCCCCCEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEEC
DYGKKDPSLGWRFTDAWLSMAGNGDKGIPNGLPVDEWGIRMEGCRPVGSSVERGGDTNGP
CCCCCCCCCCCEEHHHHHHHCCCCCCCCCCCCCCHHHCCEECCCCCCCCHHHCCCCCCCC
AAVYSITKYLDWMKKYAPPQAQGMTFSEAGPVPAQGNVAQQIFWYTAFTADMVKPGLPVV
HHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCEE
NADGTPKWRMAPSPHGAYWKDGMKLGYQDAGSLTLLKSTPPDRRKAAWLYLQFIVSKSVS
ECCCCCCEECCCCCCCCHHHCCCEECCCCCCCEEEEECCCCCHHHHHHHHHHHHHHCCCC
LKKSHVGLTFIRESDIWDKSFTERAPKLGGLIEFYRSPARVQWTPTGNNVPDYPKLAQLW
EECCCCCEEEEECCCCCCHHHHHHCCHHHHHHHHHCCCCEEEEECCCCCCCCCHHHHHHH
WQNIGDASSGAKTPQAAMDALAAAQDSVLERLEKSKVQGDCGPKLNKKESAEFWFNKSAK
HHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHCCCCCC
DGNIAPQRKLANEKPKGETIDYDTLIKSWPATPPKRAEAK
CCCCCCHHHHCCCCCCCCCCCHHHHHHHCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA