| Definition | Bradyrhizobium sp. ORS278 chromosome, complete genome. |
|---|---|
| Accession | NC_009445 |
| Length | 7,456,587 |
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The map label for this gene is 146338799
Identifier: 146338799
GI number: 146338799
Start: 1853928
End: 1855115
Strand: Reverse
Name: 146338799
Synonym: BRADO1733
Alternate gene names: NA
Gene position: 1855115-1853928 (Counterclockwise)
Preceding gene: 146338801
Following gene: 146338798
Centisome position: 24.88
GC content: 64.9
Gene sequence:
>1188_bases ATGTGGGCTTCGATCATATCCGAATGGCTGAGCCTGATGTTCCGCTGGCTGCACGTGATCGCGGCGGTGGCATGGATCGG CAGCTCGTTCTACTTCATCGCGCTCGATCTCAGCCTGAAGCCGCGCGACGGCCTGCCGAAGGGCGTGATGGGCGAGGCCT GGCAGGTGCATGGCGGCGGCTTTTACCACATCGTCAAATATCTGGTGGCGCCGGCGCAGATGCCGAGCGAATTGACCTGG TTCAAATGGGAGGCCTACACCACCTGGCTGTCCGGCTTCGTGCTGATGATCGTGGTGTATTATCTCAATGCCGACCTGTT CCTGGTCGACAAGTCGATCCTCGATCTCACGCCGCTGCAGGCCGGCCTGTTCAGCTTCGGCTCGCTGGCGCTGGCCTGGC TGCTCTACGAGGCGGCCTGCCGCGGCGGACTCGCCAAGCACGAGCTGCCCTTCGCGATCGGCGGCTACGTCTTCCTCGTT GCGCTCACCTTCGCCTTCACCCACGTGCTGAGCGGCCGGGGCGCCTTCAACCAGATCGGCGCGATCATCGGCACCATCAT GGTCGCCAACGTGTTTACGGTGATCATTCCCAACCAGAAGAAGATCGTGGCCGCGCTGCTGGCGAACGAAGCGCCGGATC CCAAGCTCGGCAAGGCCGGCAAGGAGCGCTCGGTCCACAACAATTATCTCACGCTGCCGGTCGTGGTGCTGATGATCAGC AATCACTATCCGCTCCTGTTCGGCACCCGCTACAACTGGGCCATCGTTGCCATCGTGCTGGCGCTCGGTCCCGTGATCCG CCACTTCTTCAACGAGCGCCACAAGGGCAACCCGTCGCCATGGTGGGTCTGGGGCGTCGCTGGCGCCGGCATGATCGCGA TCCTTTTGTTGTCCGCCGCGGGGCCCCGCGACGCCAAGACAGCCGCTGGCGGCGCACCGCCGAGCTTCGCACAGGTCGAG GAGATCGTGACCTCCCGCTGCAGCATGTGCCACGCCGCCGAACCCGTCTGGGACGGCATCGTCACCGCGCCCAAGGGCGT GCTGCTCGACAATGCCGAGCACATCCAGCGCAACGCGCGGCTGATCGCACGCAACGCCGCATGGTCCAGCGCCATGCCGC CCGGCAACATCACCGAGATCACCGCTGACGAACGTGCGGTGCTCGCTGCCTGGGCGGGTGGGCAGTAG
Upstream 100 bases:
>100_bases TTACCCAGTAACGACTGTGACTCGCCCTGCTGTTGGAATTGGCACTGCGCGGACTGCGCGTTCTGTGCTCAGATGAGACA TCTTAGGAGTTGACCGCGCG
Downstream 100 bases:
>100_bases AGTAGTCTGCCCTCCAGTTGCTCTGCCGTATGGTTGCGCCAGGGCGCGTCGCGGCTTGCCCGGGACGACGACGGAGTCCG TAGGGTGGGCAAAGGCGCGC
Product: putative cytochrome c region
Products: NA
Alternate protein names: Transmembrane Protein; Cytochrome C Subfamily; Cytochrome C Region
Number of amino acids: Translated: 395; Mature: 395
Protein sequence:
>395_residues MWASIISEWLSLMFRWLHVIAAVAWIGSSFYFIALDLSLKPRDGLPKGVMGEAWQVHGGGFYHIVKYLVAPAQMPSELTW FKWEAYTTWLSGFVLMIVVYYLNADLFLVDKSILDLTPLQAGLFSFGSLALAWLLYEAACRGGLAKHELPFAIGGYVFLV ALTFAFTHVLSGRGAFNQIGAIIGTIMVANVFTVIIPNQKKIVAALLANEAPDPKLGKAGKERSVHNNYLTLPVVVLMIS NHYPLLFGTRYNWAIVAIVLALGPVIRHFFNERHKGNPSPWWVWGVAGAGMIAILLLSAAGPRDAKTAAGGAPPSFAQVE EIVTSRCSMCHAAEPVWDGIVTAPKGVLLDNAEHIQRNARLIARNAAWSSAMPPGNITEITADERAVLAAWAGGQ
Sequences:
>Translated_395_residues MWASIISEWLSLMFRWLHVIAAVAWIGSSFYFIALDLSLKPRDGLPKGVMGEAWQVHGGGFYHIVKYLVAPAQMPSELTW FKWEAYTTWLSGFVLMIVVYYLNADLFLVDKSILDLTPLQAGLFSFGSLALAWLLYEAACRGGLAKHELPFAIGGYVFLV ALTFAFTHVLSGRGAFNQIGAIIGTIMVANVFTVIIPNQKKIVAALLANEAPDPKLGKAGKERSVHNNYLTLPVVVLMIS NHYPLLFGTRYNWAIVAIVLALGPVIRHFFNERHKGNPSPWWVWGVAGAGMIAILLLSAAGPRDAKTAAGGAPPSFAQVE EIVTSRCSMCHAAEPVWDGIVTAPKGVLLDNAEHIQRNARLIARNAAWSSAMPPGNITEITADERAVLAAWAGGQ >Mature_395_residues MWASIISEWLSLMFRWLHVIAAVAWIGSSFYFIALDLSLKPRDGLPKGVMGEAWQVHGGGFYHIVKYLVAPAQMPSELTW FKWEAYTTWLSGFVLMIVVYYLNADLFLVDKSILDLTPLQAGLFSFGSLALAWLLYEAACRGGLAKHELPFAIGGYVFLV ALTFAFTHVLSGRGAFNQIGAIIGTIMVANVFTVIIPNQKKIVAALLANEAPDPKLGKAGKERSVHNNYLTLPVVVLMIS NHYPLLFGTRYNWAIVAIVLALGPVIRHFFNERHKGNPSPWWVWGVAGAGMIAILLLSAAGPRDAKTAAGGAPPSFAQVE EIVTSRCSMCHAAEPVWDGIVTAPKGVLLDNAEHIQRNARLIARNAAWSSAMPPGNITEITADERAVLAAWAGGQ
Specific function: Unknown
COG id: COG3748
COG function: function code S; Predicted membrane protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 43007; Mature: 43007
Theoretical pI: Translated: 8.74; Mature: 8.74
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MWASIISEWLSLMFRWLHVIAAVAWIGSSFYFIALDLSLKPRDGLPKGVMGEAWQVHGGG CHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEEEEECCCCCCCCCCCCCCEEECCCH FYHIVKYLVAPAQMPSELTWFKWEAYTTWLSGFVLMIVVYYLNADLFLVDKSILDLTPLQ HHHHHHHHHHHHCCCCCCCEEEHHHHHHHHHHHHHHHHHHHHCCCEEEEECHHHHCCHHH AGLFSFGSLALAWLLYEAACRGGLAKHELPFAIGGYVFLVALTFAFTHVLSGRGAFNQIG HHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHH AIIGTIMVANVFTVIIPNQKKIVAALLANEAPDPKLGKAGKERSVHNNYLTLPVVVLMIS HHHHHHHHHHHHHEEECCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHC NHYPLLFGTRYNWAIVAIVLALGPVIRHFFNERHKGNPSPWWVWGVAGAGMIAILLLSAA CCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECHHHHHHHHHHHHCC GPRDAKTAAGGAPPSFAQVEEIVTSRCSMCHAAEPVWDGIVTAPKGVLLDNAEHIQRNAR CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCHHHCCHHCCCCCCEECCHHHHHHHHH LIARNAAWSSAMPPGNITEITADERAVLAAWAGGQ EEEECCCCCCCCCCCCCEEECCCCCEEEEEECCCC >Mature Secondary Structure MWASIISEWLSLMFRWLHVIAAVAWIGSSFYFIALDLSLKPRDGLPKGVMGEAWQVHGGG CHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEEEEECCCCCCCCCCCCCCEEECCCH FYHIVKYLVAPAQMPSELTWFKWEAYTTWLSGFVLMIVVYYLNADLFLVDKSILDLTPLQ HHHHHHHHHHHHCCCCCCCEEEHHHHHHHHHHHHHHHHHHHHCCCEEEEECHHHHCCHHH AGLFSFGSLALAWLLYEAACRGGLAKHELPFAIGGYVFLVALTFAFTHVLSGRGAFNQIG HHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHH AIIGTIMVANVFTVIIPNQKKIVAALLANEAPDPKLGKAGKERSVHNNYLTLPVVVLMIS HHHHHHHHHHHHHEEECCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHC NHYPLLFGTRYNWAIVAIVLALGPVIRHFFNERHKGNPSPWWVWGVAGAGMIAILLLSAA CCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECHHHHHHHHHHHHCC GPRDAKTAAGGAPPSFAQVEEIVTSRCSMCHAAEPVWDGIVTAPKGVLLDNAEHIQRNAR CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCHHHCCHHCCCCCCEECCHHHHHHHHH LIARNAAWSSAMPPGNITEITADERAVLAAWAGGQ EEEECCCCCCCCCCCCCEEECCCCCEEEEEECCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA