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The map label for this gene is frlC [C]

Identifier: 146338660

GI number: 146338660

Start: 1704490

End: 1705311

Strand: Reverse

Name: frlC [C]

Synonym: BRADO1591

Alternate gene names: 146338660

Gene position: 1705311-1704490 (Counterclockwise)

Preceding gene: 146338662

Following gene: 146338659

Centisome position: 22.87

GC content: 65.94

Gene sequence:

>822_bases
ATGTCCGCCACGCTGCCCGTCCTGGGCGCCGCCCTCTCCGTCAAATCGATTCCTGCGCACACCGACTGGCTGCTTGAGCG
CCAGCGTGATCTCGAGATCCAGGACTTCTTCCGCGCCGACCTGCTCGACAGCGACTGGCGCGGCACCGCCAAGGAGATCA
AGTCGATGCTGGACGGGCACACCGGCCGGCTCGGCATCCATGGCCCGTTCTGGGGCTTCACCATCGCCAGCCACGACCCG
ATGATCCGCCGCGCGGTCACCAAGCGGCTGCTGCAGGGCCTCGAGGTCGCAGAGTTCCTCGGCGCAACGCAGATGGTGAT
CCACTCGCCCTACACGACCTGGGACTACAACAATATCGACATGCTGCCCGACAATCGCGAGGGGTTGATCGAGCGCGTCC
GCGCGACGCTGTCGGATGTGATCGCCTCCGCCGAGCAGGCCAATTGCGAGCTCGTGATCGAAAACATCGAGGACAAGAAT
CCGCTGGATCGCGTCGGATTGGCGAAGGCGCTCGGCAGCAGCAAGGTGCGCGTGTCGCTCGACACCGGCCACGCCAACTA
CGCGCATCATTCCACCGGCGCACCGCCGGTCGACTACTACGTCGATGCCGCCGGCGACATGCTGGCGCATGTGCATCTGC
AGGACACCGACGGCTACGCCGATCGCCATTGGGCGCCGGGCGAAGGCAACATCCGCTGGGTCGCCGTGTTCCGCGCGCTC
GCGAAGCTCACCTCCAATCCGCGTCTGATCCTCGAGCTGCGCAACCACGATCACGTCAAGGCCGGCGCGGCGTACCTCGC
CTCGCTCGAGCTCGCGCAATAA

Upstream 100 bases:

>100_bases
CACAGCCACACAAGATGTCGAGGCTTTCATCCACAGCCCTTCATGGGGGCGTCATCGAATTCCGCTAGCGCTCGCGAGGT
CTCAAGAAGGGATCTCACCG

Downstream 100 bases:

>100_bases
CCAACGCCTTTCATTTCCTGACAACCTCACGAGAGATTGCCATGACCAAGCTCACCCGTCGCAGCCTGCTCGGCGCCGGC
GCCGCCATCGGCGGCAGCTT

Product: putative xylose isomerase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 273; Mature: 272

Protein sequence:

>273_residues
MSATLPVLGAALSVKSIPAHTDWLLERQRDLEIQDFFRADLLDSDWRGTAKEIKSMLDGHTGRLGIHGPFWGFTIASHDP
MIRRAVTKRLLQGLEVAEFLGATQMVIHSPYTTWDYNNIDMLPDNREGLIERVRATLSDVIASAEQANCELVIENIEDKN
PLDRVGLAKALGSSKVRVSLDTGHANYAHHSTGAPPVDYYVDAAGDMLAHVHLQDTDGYADRHWAPGEGNIRWVAVFRAL
AKLTSNPRLILELRNHDHVKAGAAYLASLELAQ

Sequences:

>Translated_273_residues
MSATLPVLGAALSVKSIPAHTDWLLERQRDLEIQDFFRADLLDSDWRGTAKEIKSMLDGHTGRLGIHGPFWGFTIASHDP
MIRRAVTKRLLQGLEVAEFLGATQMVIHSPYTTWDYNNIDMLPDNREGLIERVRATLSDVIASAEQANCELVIENIEDKN
PLDRVGLAKALGSSKVRVSLDTGHANYAHHSTGAPPVDYYVDAAGDMLAHVHLQDTDGYADRHWAPGEGNIRWVAVFRAL
AKLTSNPRLILELRNHDHVKAGAAYLASLELAQ
>Mature_272_residues
SATLPVLGAALSVKSIPAHTDWLLERQRDLEIQDFFRADLLDSDWRGTAKEIKSMLDGHTGRLGIHGPFWGFTIASHDPM
IRRAVTKRLLQGLEVAEFLGATQMVIHSPYTTWDYNNIDMLPDNREGLIERVRATLSDVIASAEQANCELVIENIEDKNP
LDRVGLAKALGSSKVRVSLDTGHANYAHHSTGAPPVDYYVDAAGDMLAHVHLQDTDGYADRHWAPGEGNIRWVAVFRALA
KLTSNPRLILELRNHDHVKAGAAYLASLELAQ

Specific function: Not Clear, May Be Involved In An Isomerization Step. [C]

COG id: COG1082

COG function: function code G; Sugar phosphate isomerases/epimerases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: To M.jannaschii MJ1614 and MJ0008 [H]

Homologues:

None

Paralogues:

None

Copy number: 180 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013022
- InterPro:   IPR012307 [H]

Pfam domain/function: PF01261 AP_endonuc_2 [H]

EC number: NA

Molecular weight: Translated: 30216; Mature: 30084

Theoretical pI: Translated: 6.18; Mature: 6.18

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSATLPVLGAALSVKSIPAHTDWLLERQRDLEIQDFFRADLLDSDWRGTAKEIKSMLDGH
CCCCHHHHHHHHHHCCCCCHHHHHHHHHCCCCHHHHHHHHCCCCCCCCHHHHHHHHHCCC
TGRLGIHGPFWGFTIASHDPMIRRAVTKRLLQGLEVAEFLGATQMVIHSPYTTWDYNNID
CCEEECCCCCCCEEECCCCHHHHHHHHHHHHHHHHHHHHHCHHHHEEECCCCCCCCCCCC
MLPDNREGLIERVRATLSDVIASAEQANCELVIENIEDKNPLDRVGLAKALGSSKVRVSL
CCCCCHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCHHHHHHHHHCCCCEEEEEE
DTGHANYAHHSTGAPPVDYYVDAAGDMLAHVHLQDTDGYADRHWAPGEGNIRWVAVFRAL
ECCCCCCCCCCCCCCCHHEEECCCCCEEEEEEEECCCCCCCCCCCCCCCCEEHHHHHHHH
AKLTSNPRLILELRNHDHVKAGAAYLASLELAQ
HHHCCCCEEEEEECCCCCHHHHHHHHHHHHCCC
>Mature Secondary Structure 
SATLPVLGAALSVKSIPAHTDWLLERQRDLEIQDFFRADLLDSDWRGTAKEIKSMLDGH
CCCHHHHHHHHHHCCCCCHHHHHHHHHCCCCHHHHHHHHCCCCCCCCHHHHHHHHHCCC
TGRLGIHGPFWGFTIASHDPMIRRAVTKRLLQGLEVAEFLGATQMVIHSPYTTWDYNNID
CCEEECCCCCCCEEECCCCHHHHHHHHHHHHHHHHHHHHHCHHHHEEECCCCCCCCCCCC
MLPDNREGLIERVRATLSDVIASAEQANCELVIENIEDKNPLDRVGLAKALGSSKVRVSL
CCCCCHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCHHHHHHHHHCCCCEEEEEE
DTGHANYAHHSTGAPPVDYYVDAAGDMLAHVHLQDTDGYADRHWAPGEGNIRWVAVFRAL
ECCCCCCCCCCCCCCCHHEEECCCCCEEEEEEEECCCCCCCCCCCCCCCCEEHHHHHHHH
AKLTSNPRLILELRNHDHVKAGAAYLASLELAQ
HHHCCCCEEEEEECCCCCHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]