| Definition | Bradyrhizobium sp. ORS278 chromosome, complete genome. |
|---|---|
| Accession | NC_009445 |
| Length | 7,456,587 |
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The map label for this gene is 146338631
Identifier: 146338631
GI number: 146338631
Start: 1669765
End: 1670334
Strand: Reverse
Name: 146338631
Synonym: BRADO1559
Alternate gene names: NA
Gene position: 1670334-1669765 (Counterclockwise)
Preceding gene: 146338632
Following gene: 146338630
Centisome position: 22.4
GC content: 64.91
Gene sequence:
>570_bases ATGTCCTTGTCATTGTTTCGCCTCGCCGCCATCGCGCTCGGTGTCAGCCTGAGCCTGCCGTGTCTCGCGCAGGAGCTTGC GAGCGCCCCGGAGGACCGGCCCGACATCGATCTCTACGCTCTGATGTCCGGCAGCTGCGGCGGGGTGAAGGTCGATGGTC GCGAGTTCCCGTGCAAGACGGTGGCCTTCTTCCACAGCGAAAAGGGCCGCGCCCACTTCACCGTCGCCCTCGACGACCCC AACGACGACAGTCACATCATTTCCTTCTCGGGGATCAATGGCCGCAGGTCGGTTCAGAACGTCTACGTGCTGCCGATCGA CCGCATGCTCCTCAACTCGAAGCACCGCCCGAAGGTCGACGGCATCCCGGTGCCCGCGGCGCAGAGTTCGTCGGGGGTCT GCCGGCAGGTCGGCAATTTCGCGATGCTGAAGGTCACCAGCGTAACCTGCACGGCCAAGGACGATGCCGGCCGCGCCTAT GAGCTGAAGTTCGTCTCCGACGGCACGCCCATCACCCTGCGCCGGGTGCGCCAGACCATGACGAACGCCGAGCACGACCC GTATCAATAG
Upstream 100 bases:
>100_bases GCTCCCACGATCGCGCGACCTGATTTTGCCGCAAAGTTGACACATGATTTGACTGAGTCGTTACCCCCTCCATCGTCATT TCCCGGACCGATCGCTGCGG
Downstream 100 bases:
>100_bases CCGGTCGCCGCGCTGCCCGGCGCGCTCCGCACCGGATGCGAAAATATTTCCGATCCCGTTGAACGTGTGCACGATCCTCC CGACCTATCGGCAAAGGGGA
Product: putative signal peptide
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 189; Mature: 188
Protein sequence:
>189_residues MSLSLFRLAAIALGVSLSLPCLAQELASAPEDRPDIDLYALMSGSCGGVKVDGREFPCKTVAFFHSEKGRAHFTVALDDP NDDSHIISFSGINGRRSVQNVYVLPIDRMLLNSKHRPKVDGIPVPAAQSSSGVCRQVGNFAMLKVTSVTCTAKDDAGRAY ELKFVSDGTPITLRRVRQTMTNAEHDPYQ
Sequences:
>Translated_189_residues MSLSLFRLAAIALGVSLSLPCLAQELASAPEDRPDIDLYALMSGSCGGVKVDGREFPCKTVAFFHSEKGRAHFTVALDDP NDDSHIISFSGINGRRSVQNVYVLPIDRMLLNSKHRPKVDGIPVPAAQSSSGVCRQVGNFAMLKVTSVTCTAKDDAGRAY ELKFVSDGTPITLRRVRQTMTNAEHDPYQ >Mature_188_residues SLSLFRLAAIALGVSLSLPCLAQELASAPEDRPDIDLYALMSGSCGGVKVDGREFPCKTVAFFHSEKGRAHFTVALDDPN DDSHIISFSGINGRRSVQNVYVLPIDRMLLNSKHRPKVDGIPVPAAQSSSGVCRQVGNFAMLKVTSVTCTAKDDAGRAYE LKFVSDGTPITLRRVRQTMTNAEHDPYQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 20512; Mature: 20380
Theoretical pI: Translated: 7.90; Mature: 7.90
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.6 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 5.3 %Cys+Met (Translated Protein) 2.7 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 4.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSLSLFRLAAIALGVSLSLPCLAQELASAPEDRPDIDLYALMSGSCGGVKVDGREFPCKT CCCHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCCCCEEEEEECCCCCCEEECCCCCCCEE VAFFHSEKGRAHFTVALDDPNDDSHIISFSGINGRRSVQNVYVLPIDRMLLNSKHRPKVD EEEEECCCCCEEEEEEECCCCCCCEEEEEECCCCCCCCCEEEEEEHHHHHHCCCCCCCCC GIPVPAAQSSSGVCRQVGNFAMLKVTSVTCTAKDDAGRAYELKFVSDGTPITLRRVRQTM CCCCCCCCCCCCHHHHHCCEEEEEEEEEEEECCCCCCCEEEEEEECCCCCCHHHHHHHHH TNAEHDPYQ HCCCCCCCC >Mature Secondary Structure SLSLFRLAAIALGVSLSLPCLAQELASAPEDRPDIDLYALMSGSCGGVKVDGREFPCKT CCHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCCCCEEEEEECCCCCCEEECCCCCCCEE VAFFHSEKGRAHFTVALDDPNDDSHIISFSGINGRRSVQNVYVLPIDRMLLNSKHRPKVD EEEEECCCCCEEEEEEECCCCCCCEEEEEECCCCCCCCCEEEEEEHHHHHHCCCCCCCCC GIPVPAAQSSSGVCRQVGNFAMLKVTSVTCTAKDDAGRAYELKFVSDGTPITLRRVRQTM CCCCCCCCCCCCHHHHHCCEEEEEEEEEEEECCCCCCCEEEEEEECCCCCCHHHHHHHHH TNAEHDPYQ HCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA