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The map label for this gene is rmuC [H]

Identifier: 146337884

GI number: 146337884

Start: 813778

End: 815022

Strand: Reverse

Name: rmuC [H]

Synonym: BRADO0769

Alternate gene names: 146337884

Gene position: 815022-813778 (Counterclockwise)

Preceding gene: 146337889

Following gene: 146337883

Centisome position: 10.93

GC content: 66.51

Gene sequence:

>1245_bases
ATGACCGCCAGCCAGCCGCTCAATTCTGCGCTCAATCCTGTCGTCGTCATGATCGGCGACCTGCCGATCCGGGCCAGCGA
TGCGCTGATCGGATTCGGCGTGATGGTGCTGCTGCTGCTCGCGATGATCGGCTTGGCGGTGGCCCGCTCCGGACGACGCA
GCGCTGTTCTCGCCGCCCAGCAGGCGATGCGAACCGAGGAGCTCGAACAACGGTTCGGCGAGATGATCCGGGTGCAGAGC
GAGGCCTCCGGCCGGGTCGACGCCATGGCGCAATTGCTCGCCGGTCGCCAGGTGGATCTGGCGCGCAGCGTCAACGAGCG
GCTCGACGCCGTGACCCATCGCGTCGGCCAGTCGATGGAGCAGACTACGCGCCACACCATGGACTCCTTGCGCGTGCTGC
ATGAGCGGCTCGGCATCATCGACAACGCCCATCGCGATCTCAGCGAGCTGACCACGCAGGTCTCGACCTTGCGCGACGTG
CTCGCCAACAAGCAGTCACGCGGCGCGTTCGGCCAGGCGCGCATGGAGGCGATCGTGCAGGACGGGCTGCCGAGGGGCAG
CTACGCGTTCCAGCACACGCTCGCCAGCGGCAAGCGGCCGGACTGCGTGGTGTTCCTGCCCGACACGAGGCCGCTGTGCA
TCGACGCCAAGTTTCCGCTGGAAGCCGTCACCGCTCTGCATGATGCAGAGACCGAGGATGAGAAGCGCGCTGCCGCGCAG
CAGCTGCGCACCGACGTGCTGCGGCATGTCAACGACATCGCGGAGAAGTACCTGGTCGTCGGCGAGACGCAGGACACCGC
GCTGATGTTCGTGCCGTCGGAGTCCGTCTATGCTGAAATCCACGATGGTTTCGACGACGTCATTCAGAAGGCCTATCGCG
CCCGCGTCGTACTGGTGTCGCCGTCGCTGCTGATGCTCGCGATCCAGGTCATGCAGCAGATCATGAAGGACGCCCGCATC
CGCGACGCCGCCGACCAGATCCGCAACGAGGTGATCCATCTCGGCGACGATCTCGGCCGCCTGCGCGAGCGCGTGCTCAA
GCTGCAGAAGCACTTTGGCGATGTCGGCGAGGACATCCGCCAGATCCTCATTTCAGCCGACAAGATCGAGAAACGCGCTG
CCCGCATCGAGGAGCTGGATTTCAGCAAGCCGGACGCAGCGGTGGAGTCGCCGCGGATCGCGCCGGGCACGGGTGCGACG
CCGGACCTGTCTCCGCTGGCGGGACGCCTGCAGGCGGGGGAGTGA

Upstream 100 bases:

>100_bases
TGAATTTCAACGGTCCGTTAACCACGCTTCTTAACCCGGCCTTAACCATAAATGTTCTCTCTTCGTTCGCGACGCCTTGC
GAATCGGATAGACGGGGGCG

Downstream 100 bases:

>100_bases
CGGCCGGACGGCTGTCTTGCGTAAGCCAGCAACTCCGACAAGACTGTCATCGCCCGGCTTGACCGGGCGATCCAGTATCC
CAGAGACGTCTGATGGGTAC

Product: putative RmuC family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 414; Mature: 413

Protein sequence:

>414_residues
MTASQPLNSALNPVVVMIGDLPIRASDALIGFGVMVLLLLAMIGLAVARSGRRSAVLAAQQAMRTEELEQRFGEMIRVQS
EASGRVDAMAQLLAGRQVDLARSVNERLDAVTHRVGQSMEQTTRHTMDSLRVLHERLGIIDNAHRDLSELTTQVSTLRDV
LANKQSRGAFGQARMEAIVQDGLPRGSYAFQHTLASGKRPDCVVFLPDTRPLCIDAKFPLEAVTALHDAETEDEKRAAAQ
QLRTDVLRHVNDIAEKYLVVGETQDTALMFVPSESVYAEIHDGFDDVIQKAYRARVVLVSPSLLMLAIQVMQQIMKDARI
RDAADQIRNEVIHLGDDLGRLRERVLKLQKHFGDVGEDIRQILISADKIEKRAARIEELDFSKPDAAVESPRIAPGTGAT
PDLSPLAGRLQAGE

Sequences:

>Translated_414_residues
MTASQPLNSALNPVVVMIGDLPIRASDALIGFGVMVLLLLAMIGLAVARSGRRSAVLAAQQAMRTEELEQRFGEMIRVQS
EASGRVDAMAQLLAGRQVDLARSVNERLDAVTHRVGQSMEQTTRHTMDSLRVLHERLGIIDNAHRDLSELTTQVSTLRDV
LANKQSRGAFGQARMEAIVQDGLPRGSYAFQHTLASGKRPDCVVFLPDTRPLCIDAKFPLEAVTALHDAETEDEKRAAAQ
QLRTDVLRHVNDIAEKYLVVGETQDTALMFVPSESVYAEIHDGFDDVIQKAYRARVVLVSPSLLMLAIQVMQQIMKDARI
RDAADQIRNEVIHLGDDLGRLRERVLKLQKHFGDVGEDIRQILISADKIEKRAARIEELDFSKPDAAVESPRIAPGTGAT
PDLSPLAGRLQAGE
>Mature_413_residues
TASQPLNSALNPVVVMIGDLPIRASDALIGFGVMVLLLLAMIGLAVARSGRRSAVLAAQQAMRTEELEQRFGEMIRVQSE
ASGRVDAMAQLLAGRQVDLARSVNERLDAVTHRVGQSMEQTTRHTMDSLRVLHERLGIIDNAHRDLSELTTQVSTLRDVL
ANKQSRGAFGQARMEAIVQDGLPRGSYAFQHTLASGKRPDCVVFLPDTRPLCIDAKFPLEAVTALHDAETEDEKRAAAQQ
LRTDVLRHVNDIAEKYLVVGETQDTALMFVPSESVYAEIHDGFDDVIQKAYRARVVLVSPSLLMLAIQVMQQIMKDARIR
DAADQIRNEVIHLGDDLGRLRERVLKLQKHFGDVGEDIRQILISADKIEKRAARIEELDFSKPDAAVESPRIAPGTGATP
DLSPLAGRLQAGE

Specific function: Involved in DNA recombination [H]

COG id: COG1322

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the rmuC family [H]

Homologues:

Organism=Escherichia coli, GI1790266, Length=293, Percent_Identity=24.5733788395904, Blast_Score=62, Evalue=1e-10,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003798 [H]

Pfam domain/function: PF02646 RmuC [H]

EC number: NA

Molecular weight: Translated: 45539; Mature: 45408

Theoretical pI: Translated: 6.03; Mature: 6.03

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTASQPLNSALNPVVVMIGDLPIRASDALIGFGVMVLLLLAMIGLAVARSGRRSAVLAAQ
CCCCCCHHHHCCCEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHH
QAMRTEELEQRFGEMIRVQSEASGRVDAMAQLLAGRQVDLARSVNERLDAVTHRVGQSME
HHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHH
QTTRHTMDSLRVLHERLGIIDNAHRDLSELTTQVSTLRDVLANKQSRGAFGQARMEAIVQ
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHH
DGLPRGSYAFQHTLASGKRPDCVVFLPDTRPLCIDAKFPLEAVTALHDAETEDEKRAAAQ
CCCCCCCHHHHHHHHCCCCCCEEEECCCCCCEEEECCCCHHHHHHHHCCCCHHHHHHHHH
QLRTDVLRHVNDIAEKYLVVGETQDTALMFVPSESVYAEIHDGFDDVIQKAYRARVVLVS
HHHHHHHHHHHHHHHHHEEEECCCCCEEEEECCHHHHHHHHCCHHHHHHHHHHCEEEEEC
PSLLMLAIQVMQQIMKDARIRDAADQIRNEVIHLGDDLGRLRERVLKLQKHFGDVGEDIR
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHH
QILISADKIEKRAARIEELDFSKPDAAVESPRIAPGTGATPDLSPLAGRLQAGE
HHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCC
>Mature Secondary Structure 
TASQPLNSALNPVVVMIGDLPIRASDALIGFGVMVLLLLAMIGLAVARSGRRSAVLAAQ
CCCCCHHHHCCCEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHH
QAMRTEELEQRFGEMIRVQSEASGRVDAMAQLLAGRQVDLARSVNERLDAVTHRVGQSME
HHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHH
QTTRHTMDSLRVLHERLGIIDNAHRDLSELTTQVSTLRDVLANKQSRGAFGQARMEAIVQ
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHH
DGLPRGSYAFQHTLASGKRPDCVVFLPDTRPLCIDAKFPLEAVTALHDAETEDEKRAAAQ
CCCCCCCHHHHHHHHCCCCCCEEEECCCCCCEEEECCCCHHHHHHHHCCCCHHHHHHHHH
QLRTDVLRHVNDIAEKYLVVGETQDTALMFVPSESVYAEIHDGFDDVIQKAYRARVVLVS
HHHHHHHHHHHHHHHHHEEEECCCCCEEEEECCHHHHHHHHCCHHHHHHHHHHCEEEEEC
PSLLMLAIQVMQQIMKDARIRDAADQIRNEVIHLGDDLGRLRERVLKLQKHFGDVGEDIR
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHH
QILISADKIEKRAARIEELDFSKPDAAVESPRIAPGTGATPDLSPLAGRLQAGE
HHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 10910347 [H]