Definition | Bradyrhizobium sp. ORS278 chromosome, complete genome. |
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Accession | NC_009445 |
Length | 7,456,587 |
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The map label for this gene is 146337857
Identifier: 146337857
GI number: 146337857
Start: 778919
End: 779650
Strand: Direct
Name: 146337857
Synonym: BRADO0739
Alternate gene names: NA
Gene position: 778919-779650 (Clockwise)
Preceding gene: 146337851
Following gene: 146337858
Centisome position: 10.45
GC content: 65.3
Gene sequence:
>732_bases ATGACCCCGAGCTTTAACCCTAACCACGTGACCCGGTCCCTGCTGCGCCGAAGCCGACAGGGCGCGCTCGCGACCCTGAT GACGGGCTCGGGCGATCCCTATTGTTCCCTCGTCAACGTCGCCACCGCCGCCGACGGCGCGCCGATCATCCTGATCTCGC GATTAGCAGTGCACACGAAGAACGTTCTCGCCGATTCGCGCGTGTCGCTGATGCTCGATGAACGCGCGCCGGGTGATCCG CTCGAAGGCGCTCGCATCATGCTGTCGGGCAAGGCCGAACAGGCAACTGATGAGAACAAGGATGCGCTTCGTCGCCGGTA TCTCAATGTGCATCCGTCAGCGGCCGACTACGCCGATTTTGCCGACTTCTCCTTCTTCCTCATTCGTCCGGCCGGCACGC ATCTCGTCGCCGGATTCGGCCGCATCGTCGATCTCAAGCCGGAGCAGTTTCTGACGGATGTATCCGACGCCGCCGAACTG CTGGCGGCGGAGCAGGGCGCTGTGGATCACATGAACGAGGATCACCGGGATGCGCTCGGCCTCTACGCCACCAAGCTGCT CGGCGCGGACGCGGCCGAGTGGCGCTGCTCCGGATGCGATCCCGACGGATTGGACCTGATGGCCGAGGGCAAGACGCTGC GGCTGGATTTTCCCGAGCGCGTCGCCACGCCGGGGGCGTTGCGCAAGATGCTGGTGCGGCTCGCCGACGAGGCGCGGGCG AAGATTGGGTAG
Upstream 100 bases:
>100_bases TCCACAAATACGATGGCAAAGTCTTGTGCCGTGCCCAGGTTTGTGGCCCGTTTAGCCGAAAAAAGGCCTTCATTGCAACT GGATGGACGAGGGAAAGACG
Downstream 100 bases:
>100_bases CCGAGCTGACTGCTCATCAGTCGAGCAATCTCTGACGGCAGTCTCCGCGCCAAAGCAGCGGTGCGATTCCTTTCCTCGTT CCTGCGTGGCGAGGATCGGC
Product: putative pyridoxamine 5'-phosphate oxidase-like, FMN-binding
Products: NA
Alternate protein names: Pyridoxamine Oxidase Protein; Heme Iron Utilization Protein; Pyridoxamine 5-Phosphate Oxidase-Like Protein; Pyridoxamine 5prime-Phosphate Oxidase-Related Protein; Pyridoxamine 5-Phosphate Oxidase; Pyridoxamine 5-Phosphate Oxidase-Related
Number of amino acids: Translated: 243; Mature: 242
Protein sequence:
>243_residues MTPSFNPNHVTRSLLRRSRQGALATLMTGSGDPYCSLVNVATAADGAPIILISRLAVHTKNVLADSRVSLMLDERAPGDP LEGARIMLSGKAEQATDENKDALRRRYLNVHPSAADYADFADFSFFLIRPAGTHLVAGFGRIVDLKPEQFLTDVSDAAEL LAAEQGAVDHMNEDHRDALGLYATKLLGADAAEWRCSGCDPDGLDLMAEGKTLRLDFPERVATPGALRKMLVRLADEARA KIG
Sequences:
>Translated_243_residues MTPSFNPNHVTRSLLRRSRQGALATLMTGSGDPYCSLVNVATAADGAPIILISRLAVHTKNVLADSRVSLMLDERAPGDP LEGARIMLSGKAEQATDENKDALRRRYLNVHPSAADYADFADFSFFLIRPAGTHLVAGFGRIVDLKPEQFLTDVSDAAEL LAAEQGAVDHMNEDHRDALGLYATKLLGADAAEWRCSGCDPDGLDLMAEGKTLRLDFPERVATPGALRKMLVRLADEARA KIG >Mature_242_residues TPSFNPNHVTRSLLRRSRQGALATLMTGSGDPYCSLVNVATAADGAPIILISRLAVHTKNVLADSRVSLMLDERAPGDPL EGARIMLSGKAEQATDENKDALRRRYLNVHPSAADYADFADFSFFLIRPAGTHLVAGFGRIVDLKPEQFLTDVSDAAELL AAEQGAVDHMNEDHRDALGLYATKLLGADAAEWRCSGCDPDGLDLMAEGKTLRLDFPERVATPGALRKMLVRLADEARAK IG
Specific function: Unknown
COG id: COG0748
COG function: function code P; Putative heme iron utilization protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 26241; Mature: 26110
Theoretical pI: Translated: 5.64; Mature: 5.64
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTPSFNPNHVTRSLLRRSRQGALATLMTGSGDPYCSLVNVATAADGAPIILISRLAVHTK CCCCCCHHHHHHHHHHHHHCCCEEEEEECCCCCCCCEEEHHHCCCCCCEEHHHHHHHHHH NVLADSRVSLMLDERAPGDPLEGARIMLSGKAEQATDENKDALRRRYLNVHPSAADYADF HHHHCCCEEEEECCCCCCCCCCCCEEEEECCCHHCCCCCHHHHHHHHCCCCCCCCCHHHH ADFSFFLIRPAGTHLVAGFGRIVDLKPEQFLTDVSDAAELLAAEQGAVDHMNEDHRDALG CCCEEEEECCCCCHHHHCCCCEEECCHHHHHHHHHHHHHHHHHHCCCHHHCCCHHHHHHH LYATKLLGADAAEWRCSGCDPDGLDLMAEGKTLRLDFPERVATPGALRKMLVRLADEARA HHHHHHHCCCCCCCEECCCCCCCCEEEECCCEEEEECHHHHCCCHHHHHHHHHHHHHHHH KIG CCC >Mature Secondary Structure TPSFNPNHVTRSLLRRSRQGALATLMTGSGDPYCSLVNVATAADGAPIILISRLAVHTK CCCCCHHHHHHHHHHHHHCCCEEEEEECCCCCCCCEEEHHHCCCCCCEEHHHHHHHHHH NVLADSRVSLMLDERAPGDPLEGARIMLSGKAEQATDENKDALRRRYLNVHPSAADYADF HHHHCCCEEEEECCCCCCCCCCCCEEEEECCCHHCCCCCHHHHHHHHCCCCCCCCCHHHH ADFSFFLIRPAGTHLVAGFGRIVDLKPEQFLTDVSDAAELLAAEQGAVDHMNEDHRDALG CCCEEEEECCCCCHHHHCCCCEEECCHHHHHHHHHHHHHHHHHHCCCHHHCCCHHHHHHH LYATKLLGADAAEWRCSGCDPDGLDLMAEGKTLRLDFPERVATPGALRKMLVRLADEARA HHHHHHHCCCCCCCEECCCCCCCCEEEECCCEEEEECHHHHCCCHHHHHHHHHHHHHHHH KIG CCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA