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The map label for this gene is ftrA [H]

Identifier: 146337846

GI number: 146337846

Start: 766432

End: 767418

Strand: Reverse

Name: ftrA [H]

Synonym: BRADO0727

Alternate gene names: 146337846

Gene position: 767418-766432 (Counterclockwise)

Preceding gene: 146337848

Following gene: 146337844

Centisome position: 10.29

GC content: 70.21

Gene sequence:

>987_bases
ATGCCACGTCCTGCACGTAAACCCGATCCGGATCCCGGCCTCGTCGCCGTCATCACCTATGACGGGCTGTGCACCTTCGA
GTTCGGCATCGCCGTGGAAGTGTTCGGGCTGCCGCGGCCGGAGTTCGATTTCCCCTGGTATCGGTTCAAGGTCGTCTCCG
CAGAGGGGCGGCGGTCGCGGGCGATCGGCGGCATCGTCGTCGAGGCCGGCGCGCCGCTGACCCGGCTGAAGGAGGCACGC
ACGATCATCGTGCCCGGATGGCGCGACCGCAACGAGCGGCCGCCGGAACGGCTGCTGCGCGCCATCGCGCAAGCCTCCGC
GCGCGGCGCCCGCTGCCTGTCGATCTGCTCGGGCGTGTTCGTGCTGGCGGCGGCCGGGCTGCTCGACGGCAGGCGCGCGA
CCACGCACTGGCGGCACATGCCCGACCTGAAGCGGCTTTATCCGGGTATTCAGATCGAAGAGGACACGCTCTATGTCGAC
GAGGGCGACGTCATCACCTCGGCCGGCAGCGCCGCCGGCATCGACGCCTGCCTGCACCTCGTACGGCGCGACTTCGGAGC
CAAGATCGCCAACAGCGTGGCGCGGCGCCTGGTGATGCCGCCGCATCGCGACGGCGGACAGGCGCAATACGTCGCCGCGC
CGATCCAGGCGCGCCCCGGACGCACGATCGGCGATGTGATGGACTGGGCGCGCACAAGGCTGTCGCAACCGATCGCGATC
AGCGCCATGGCCAAGCGGGCAGGCATGAGCGAGCGCACCTTCCTGCGGCGCTTCAACGAGAGCACGGGTGCCGGCCCCGC
CGCCTGGCTGCAGCAGGAGCGCATGTCGCGCGCGCGGGAGCTGCTCGAGAGCGGGGTGCTCTCGCTTGCCGACGTCTCGG
CGCAATGCGGCTATCAGTCGCTCGAAACCTTCCGCGTCGCTTTCCGCCGCAGCGTCGGCACATCGCCGGCCGCGTATCGC
GCGCGGTTCAGAAGCAGCATGCCCTGA

Upstream 100 bases:

>100_bases
CATGGTCTCTCCAGCGACGTTGCATGAGCGGCTCCAACCTCGCGCGCAACCGCCCGCGACCCAAGTGACGGATCCGACAA
AGTCCGGTAAGTTTCCGCCA

Downstream 100 bases:

>100_bases
TGTCGGCGATCGACCAAAACACGACAAGTGAGCGCAACAAGCGAACTGCCAATTAGTTACTCGTCATGCCCGGGCTCGTC
CAGCGCATCCACGTCGTCCT

Product: transcriptional activator FtrA

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 328; Mature: 327

Protein sequence:

>328_residues
MPRPARKPDPDPGLVAVITYDGLCTFEFGIAVEVFGLPRPEFDFPWYRFKVVSAEGRRSRAIGGIVVEAGAPLTRLKEAR
TIIVPGWRDRNERPPERLLRAIAQASARGARCLSICSGVFVLAAAGLLDGRRATTHWRHMPDLKRLYPGIQIEEDTLYVD
EGDVITSAGSAAGIDACLHLVRRDFGAKIANSVARRLVMPPHRDGGQAQYVAAPIQARPGRTIGDVMDWARTRLSQPIAI
SAMAKRAGMSERTFLRRFNESTGAGPAAWLQQERMSRARELLESGVLSLADVSAQCGYQSLETFRVAFRRSVGTSPAAYR
ARFRSSMP

Sequences:

>Translated_328_residues
MPRPARKPDPDPGLVAVITYDGLCTFEFGIAVEVFGLPRPEFDFPWYRFKVVSAEGRRSRAIGGIVVEAGAPLTRLKEAR
TIIVPGWRDRNERPPERLLRAIAQASARGARCLSICSGVFVLAAAGLLDGRRATTHWRHMPDLKRLYPGIQIEEDTLYVD
EGDVITSAGSAAGIDACLHLVRRDFGAKIANSVARRLVMPPHRDGGQAQYVAAPIQARPGRTIGDVMDWARTRLSQPIAI
SAMAKRAGMSERTFLRRFNESTGAGPAAWLQQERMSRARELLESGVLSLADVSAQCGYQSLETFRVAFRRSVGTSPAAYR
ARFRSSMP
>Mature_327_residues
PRPARKPDPDPGLVAVITYDGLCTFEFGIAVEVFGLPRPEFDFPWYRFKVVSAEGRRSRAIGGIVVEAGAPLTRLKEART
IIVPGWRDRNERPPERLLRAIAQASARGARCLSICSGVFVLAAAGLLDGRRATTHWRHMPDLKRLYPGIQIEEDTLYVDE
GDVITSAGSAAGIDACLHLVRRDFGAKIANSVARRLVMPPHRDGGQAQYVAAPIQARPGRTIGDVMDWARTRLSQPIAIS
AMAKRAGMSERTFLRRFNESTGAGPAAWLQQERMSRARELLESGVLSLADVSAQCGYQSLETFRVAFRRSVGTSPAAYRA
RFRSSMP

Specific function: Regulatory Protein For The Xylbafghr Operon. [C]

COG id: COG4977

COG function: function code K; Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH araC/xylS-type DNA-binding domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009057
- InterPro:   IPR012287
- InterPro:   IPR018062
- InterPro:   IPR020449
- InterPro:   IPR018060
- InterPro:   IPR002818 [H]

Pfam domain/function: PF01965 DJ-1_PfpI; PF00165 HTH_AraC [H]

EC number: NA

Molecular weight: Translated: 36076; Mature: 35945

Theoretical pI: Translated: 10.72; Mature: 10.72

Prosite motif: PS00041 HTH_ARAC_FAMILY_1 ; PS01124 HTH_ARAC_FAMILY_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPRPARKPDPDPGLVAVITYDGLCTFEFGIAVEVFGLPRPEFDFPWYRFKVVSAEGRRSR
CCCCCCCCCCCCCEEEEEEECCEEEEEECCEEEEEECCCCCCCCCCEEEEEECCCCCCCC
AIGGIVVEAGAPLTRLKEARTIIVPGWRDRNERPPERLLRAIAQASARGARCLSICSGVF
CCCCEEEECCCCHHHHHCCCEEEECCCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHH
VLAAAGLLDGRRATTHWRHMPDLKRLYPGIQIEEDTLYVDEGDVITSAGSAAGIDACLHL
HHHHHHHCCCCCHHHHHHCCCCHHHHCCCCEEECCEEEECCCCEEECCCCCHHHHHHHHH
VRRDFGAKIANSVARRLVMPPHRDGGQAQYVAAPIQARPGRTIGDVMDWARTRLSQPIAI
HHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEECCCCCCCCHHHHHHHHHHHHHCCCHHH
SAMAKRAGMSERTFLRRFNESTGAGPAAWLQQERMSRARELLESGVLSLADVSAQCGYQS
HHHHHHCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCHHH
LETFRVAFRRSVGTSPAAYRARFRSSMP
HHHHHHHHHHHCCCCHHHHHHHHHCCCC
>Mature Secondary Structure 
PRPARKPDPDPGLVAVITYDGLCTFEFGIAVEVFGLPRPEFDFPWYRFKVVSAEGRRSR
CCCCCCCCCCCCEEEEEEECCEEEEEECCEEEEEECCCCCCCCCCEEEEEECCCCCCCC
AIGGIVVEAGAPLTRLKEARTIIVPGWRDRNERPPERLLRAIAQASARGARCLSICSGVF
CCCCEEEECCCCHHHHHCCCEEEECCCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHH
VLAAAGLLDGRRATTHWRHMPDLKRLYPGIQIEEDTLYVDEGDVITSAGSAAGIDACLHL
HHHHHHHCCCCCHHHHHHCCCCHHHHCCCCEEECCEEEECCCCEEECCCCCHHHHHHHHH
VRRDFGAKIANSVARRLVMPPHRDGGQAQYVAAPIQARPGRTIGDVMDWARTRLSQPIAI
HHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEECCCCCCCCHHHHHHHHHHHHHCCCHHH
SAMAKRAGMSERTFLRRFNESTGAGPAAWLQQERMSRARELLESGVLSLADVSAQCGYQS
HHHHHHCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCHHH
LETFRVAFRRSVGTSPAAYRARFRSSMP
HHHHHHHHHHHCCCCHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11481430 [H]