| Definition | Bradyrhizobium sp. ORS278 chromosome, complete genome. |
|---|---|
| Accession | NC_009445 |
| Length | 7,456,587 |
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The map label for this gene is map [H]
Identifier: 146337838
GI number: 146337838
Start: 756932
End: 757756
Strand: Reverse
Name: map [H]
Synonym: BRADO0719
Alternate gene names: 146337838
Gene position: 757756-756932 (Counterclockwise)
Preceding gene: 146337839
Following gene: 146337837
Centisome position: 10.16
GC content: 64.24
Gene sequence:
>825_bases ATGAGCTATATCGAAGCCACCGACACCGCTGCGCGCAAGAACGGCCAGATCAAGCTGCACGGTCCGAGCGGGTTCGCCGG CATGCGCAAGGCCGGCGCGCTGGTGTCGAAGTGCCTCGATGCGCTCACCGACATCGTCAAGCCGGGCGTGCCGACCTCGC GGATTGACGACGTCGTGCGCGACTTCGCCTTCAGCCATGGCGCCTATCCGGCAACCTTGATGTATCGCGGCTACCGCTAC TCGACCTGCACCTCGATCAATCACGTGGTCTGTCACGGCATGCCGAACGACCGGCCGCTGAAGGAAGGCGACATCATCAA TGTCGACGTCACCTTCATCGTCGACGGCTGGTATGGCGATTCGAGCCGGATGTATGCGATCGGGCCGATCTCGCGCAAGG CCGAGCGGCTGATCGAGGTGACCTATGAATCGATGATGCGCGGCATCGCCGCGGTGAAGCCCGGCGCAACCACGGGCGAT ATCGGCCACGCCATCCAGAGCTTCGTCGAGCCGCAGGGCATGAGCGTGGTGCGCGACTTCTGCGGCCATGGCCTCGGCCG GCTGTTCCACGACGAGCCGAACATCATCCATGTCGGCCGTCCCGGCGAGGGCGTGCTGCTGAAGCCCGGCATGTTCTTTA CCATCGAGCCGATGATCAATCTCGGCAAGCCGCACGTGAAGATCCTGTCCGATGGCTGGACCGCGGTCACCCGCGACCGC TCGCTGTCGGCGCAGTTCGAGCATTCGGTCGGCGTCACCAATGACGGGGTCGAGATCTTCACCCTGTCCGAGCGCCATGG CGAGAAGCCGCTGACGCAGGTGTGA
Upstream 100 bases:
>100_bases GCCACGGCCCGACCCGCCGTGCAGACCCGGCTTGCACCGGGGGGCAGGATCATTAAATTAGGCGATCACCTCACGACATG TCCGAGAACGAACCAGGTCC
Downstream 100 bases:
>100_bases GCGCGTGCAGCGCCGCGCGGCCGCACGGCGTCCGATTGTTGCCATTCGCGGCTGCTCGACTGCCTCCATCGCGCATGATC GCTGGAGGCTTCCGTGACGA
Product: methionine aminopeptidase
Products: NA
Alternate protein names: MAP; Peptidase M [H]
Number of amino acids: Translated: 274; Mature: 273
Protein sequence:
>274_residues MSYIEATDTAARKNGQIKLHGPSGFAGMRKAGALVSKCLDALTDIVKPGVPTSRIDDVVRDFAFSHGAYPATLMYRGYRY STCTSINHVVCHGMPNDRPLKEGDIINVDVTFIVDGWYGDSSRMYAIGPISRKAERLIEVTYESMMRGIAAVKPGATTGD IGHAIQSFVEPQGMSVVRDFCGHGLGRLFHDEPNIIHVGRPGEGVLLKPGMFFTIEPMINLGKPHVKILSDGWTAVTRDR SLSAQFEHSVGVTNDGVEIFTLSERHGEKPLTQV
Sequences:
>Translated_274_residues MSYIEATDTAARKNGQIKLHGPSGFAGMRKAGALVSKCLDALTDIVKPGVPTSRIDDVVRDFAFSHGAYPATLMYRGYRY STCTSINHVVCHGMPNDRPLKEGDIINVDVTFIVDGWYGDSSRMYAIGPISRKAERLIEVTYESMMRGIAAVKPGATTGD IGHAIQSFVEPQGMSVVRDFCGHGLGRLFHDEPNIIHVGRPGEGVLLKPGMFFTIEPMINLGKPHVKILSDGWTAVTRDR SLSAQFEHSVGVTNDGVEIFTLSERHGEKPLTQV >Mature_273_residues SYIEATDTAARKNGQIKLHGPSGFAGMRKAGALVSKCLDALTDIVKPGVPTSRIDDVVRDFAFSHGAYPATLMYRGYRYS TCTSINHVVCHGMPNDRPLKEGDIINVDVTFIVDGWYGDSSRMYAIGPISRKAERLIEVTYESMMRGIAAVKPGATTGDI GHAIQSFVEPQGMSVVRDFCGHGLGRLFHDEPNIIHVGRPGEGVLLKPGMFFTIEPMINLGKPHVKILSDGWTAVTRDRS LSAQFEHSVGVTNDGVEIFTLSERHGEKPLTQV
Specific function: Removes the amino-terminal methionine from nascent proteins [H]
COG id: COG0024
COG function: function code J; Methionine aminopeptidase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the peptidase M24A family [H]
Homologues:
Organism=Homo sapiens, GI164420681, Length=258, Percent_Identity=42.2480620155039, Blast_Score=225, Evalue=4e-59, Organism=Homo sapiens, GI40385867, Length=245, Percent_Identity=38.7755102040816, Blast_Score=184, Evalue=6e-47, Organism=Escherichia coli, GI1786364, Length=248, Percent_Identity=48.7903225806452, Blast_Score=251, Evalue=5e-68, Organism=Caenorhabditis elegans, GI71996291, Length=245, Percent_Identity=42.4489795918367, Blast_Score=203, Evalue=1e-52, Organism=Saccharomyces cerevisiae, GI6323273, Length=252, Percent_Identity=40.0793650793651, Blast_Score=199, Evalue=4e-52, Organism=Drosophila melanogaster, GI21355531, Length=260, Percent_Identity=40.3846153846154, Blast_Score=216, Evalue=1e-56, Organism=Drosophila melanogaster, GI24583427, Length=237, Percent_Identity=37.9746835443038, Blast_Score=186, Evalue=1e-47,
Paralogues:
None
Copy number: 3,000 Molecules/Cell In: Glucose minimal media [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001714 - InterPro: IPR000994 - InterPro: IPR002467 [H]
Pfam domain/function: PF00557 Peptidase_M24 [H]
EC number: =3.4.11.18 [H]
Molecular weight: Translated: 29904; Mature: 29772
Theoretical pI: Translated: 7.36; Mature: 7.36
Prosite motif: PS00680 MAP_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 3.6 %Met (Translated Protein) 5.1 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 4.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSYIEATDTAARKNGQIKLHGPSGFAGMRKAGALVSKCLDALTDIVKPGVPTSRIDDVVR CCCCCCCCHHHHCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHH DFAFSHGAYPATLMYRGYRYSTCTSINHVVCHGMPNDRPLKEGDIINVDVTFIVDGWYGD HHHHCCCCCCCEEEECCCCEEHHCCCCEEEEECCCCCCCCCCCCEEEEEEEEEEEEEECC SSRMYAIGPISRKAERLIEVTYESMMRGIAAVKPGATTGDIGHAIQSFVEPQGMSVVRDF CCCEEEECCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCHHHHHHH CGHGLGRLFHDEPNIIHVGRPGEGVLLKPGMFFTIEPMINLGKPHVKILSDGWTAVTRDR HCCCHHHHCCCCCCEEEECCCCCCEEECCCCEEEEECHHCCCCCCEEEEECCCEEEECCC SLSAQFEHSVGVTNDGVEIFTLSERHGEKPLTQV CCCCHHHCCCCCCCCCEEEEEECHHCCCCCCCCC >Mature Secondary Structure SYIEATDTAARKNGQIKLHGPSGFAGMRKAGALVSKCLDALTDIVKPGVPTSRIDDVVR CCCCCCCHHHHCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHH DFAFSHGAYPATLMYRGYRYSTCTSINHVVCHGMPNDRPLKEGDIINVDVTFIVDGWYGD HHHHCCCCCCCEEEECCCCEEHHCCCCEEEEECCCCCCCCCCCCEEEEEEEEEEEEEECC SSRMYAIGPISRKAERLIEVTYESMMRGIAAVKPGATTGDIGHAIQSFVEPQGMSVVRDF CCCEEEECCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCHHHHHHH CGHGLGRLFHDEPNIIHVGRPGEGVLLKPGMFFTIEPMINLGKPHVKILSDGWTAVTRDR HCCCHHHHCCCCCCEEEECCCCCCEEECCCCEEEEECHHCCCCCCEEEEECCCEEEECCC SLSAQFEHSVGVTNDGVEIFTLSERHGEKPLTQV CCCCHHHCCCCCCCCCEEEEEECHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9823893 [H]