Definition | Bradyrhizobium sp. ORS278 chromosome, complete genome. |
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Accession | NC_009445 |
Length | 7,456,587 |
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The map label for this gene is gltI [H]
Identifier: 146337810
GI number: 146337810
Start: 723466
End: 724392
Strand: Direct
Name: gltI [H]
Synonym: BRADO0689
Alternate gene names: 146337810
Gene position: 723466-724392 (Clockwise)
Preceding gene: 146337809
Following gene: 146337812
Centisome position: 9.7
GC content: 64.62
Gene sequence:
>927_bases ATGCGCGGTTGCGTCGTCGTCGCAAGTCTCACGGTCGCAGCACTGCTCGCGTGCGCCGGCGCGCAACCGGGTATCGCGCA AAGCGGCGCCGGCGAGGGCCTGTCGCCGACGCTGGCCGCGATCAAGGCGCGGCATGTGGTCAATCTGGGTTACCGCGAGA GCTCGCCGCCATTCTCGTTCCTCGATCAGGCGGGTCGGCCGATCGGCTACAGTCTCGAACTGTGCGAGGCCATCGTCGAG GAAATCGGCGGCGAGATCGACGACCCCGGCCTGCGCATTGCCTATGTCAAGGTGACGTCCGACGATCGCATCGATGCAGT CGTCGCTGGCAGGATCGATCTTGAATGCGGCTCGACCACGGCGAATGCCGAGCGATCGCGGCAGGTGTCTTTCTCTCCGC TGATTTTCGTCGCCGGGACCAAGCTGATGGTGTCCAAGGGCTCGCCGGTCGCGTCGGCAACCGATCTCCGGGGCAAGTCG GTCGTGGTGACCAAGGGCACCACGAACGAAGCTGCGATGCGCGAGGTCGACCGGAAGTCCGCGCTCGGCCTCACGGTGGT GACGGCGACCGATCACGAGCAGTCCTATCAGATGCTCGTGGACGGCAAGGTCGATGCCTTCGCCACCGATGACATCCTGC TCTCGGGCCTGATCGCGCGGCACAAGGCGCAGGACAAGATGCGGATCGTCGGCGACTATCTGTCCTATGACCCCTATGGA ATCATGTTCCGCAAGGATGAGCCGCAGCTCGCGGCCGTGGTCGAGAGGGCGTTCCGGCGGCTCGGCTCCAACCATGACCT CATTCCGCTCTACAACAAGTGGTTCGTCCGACGGTTGCCGACGGGAGAGCGGCTCAACGCAGCGATCTCGCCACAGCTCG AGCAGGCCTTTCATGTGCTCGATGACAGCCCGGCCGCGAACAACTGA
Upstream 100 bases:
>100_bases GCTCGGGCCGGAGCATGCGCTCGGCCCGTCGGATGTCGTGCCGCCCGACATGATCCCCGGCGAGGTTCCGGCCATGGCCG GGCAGTGACGGAGGCCCGGC
Downstream 100 bases:
>100_bases CCGGAAAGGGCTCGTTGCCGGGTGCGTGGTGCTTTCGTCAGGGGCATGATCGCGGGCGGCGTTCTCCGAAGATCTTGTCC AGGGCCGCGAAACAGGCGGC
Product: ABC transporter substrate-binding protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 308; Mature: 308
Protein sequence:
>308_residues MRGCVVVASLTVAALLACAGAQPGIAQSGAGEGLSPTLAAIKARHVVNLGYRESSPPFSFLDQAGRPIGYSLELCEAIVE EIGGEIDDPGLRIAYVKVTSDDRIDAVVAGRIDLECGSTTANAERSRQVSFSPLIFVAGTKLMVSKGSPVASATDLRGKS VVVTKGTTNEAAMREVDRKSALGLTVVTATDHEQSYQMLVDGKVDAFATDDILLSGLIARHKAQDKMRIVGDYLSYDPYG IMFRKDEPQLAAVVERAFRRLGSNHDLIPLYNKWFVRRLPTGERLNAAISPQLEQAFHVLDDSPAANN
Sequences:
>Translated_308_residues MRGCVVVASLTVAALLACAGAQPGIAQSGAGEGLSPTLAAIKARHVVNLGYRESSPPFSFLDQAGRPIGYSLELCEAIVE EIGGEIDDPGLRIAYVKVTSDDRIDAVVAGRIDLECGSTTANAERSRQVSFSPLIFVAGTKLMVSKGSPVASATDLRGKS VVVTKGTTNEAAMREVDRKSALGLTVVTATDHEQSYQMLVDGKVDAFATDDILLSGLIARHKAQDKMRIVGDYLSYDPYG IMFRKDEPQLAAVVERAFRRLGSNHDLIPLYNKWFVRRLPTGERLNAAISPQLEQAFHVLDDSPAANN >Mature_308_residues MRGCVVVASLTVAALLACAGAQPGIAQSGAGEGLSPTLAAIKARHVVNLGYRESSPPFSFLDQAGRPIGYSLELCEAIVE EIGGEIDDPGLRIAYVKVTSDDRIDAVVAGRIDLECGSTTANAERSRQVSFSPLIFVAGTKLMVSKGSPVASATDLRGKS VVVTKGTTNEAAMREVDRKSALGLTVVTATDHEQSYQMLVDGKVDAFATDDILLSGLIARHKAQDKMRIVGDYLSYDPYG IMFRKDEPQLAAVVERAFRRLGSNHDLIPLYNKWFVRRLPTGERLNAAISPQLEQAFHVLDDSPAANN
Specific function: Part of the binding-protein-dependent transport system for glutamate and aspartate. Binds to both aspartate and glutamate [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Periplasm [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the bacterial solute-binding protein 3 family [H]
Homologues:
Organism=Escherichia coli, GI1786876, Length=267, Percent_Identity=35.2059925093633, Blast_Score=189, Evalue=2e-49, Organism=Escherichia coli, GI1788228, Length=252, Percent_Identity=29.3650793650794, Blast_Score=92, Evalue=4e-20, Organism=Escherichia coli, GI1788649, Length=237, Percent_Identity=25.3164556962025, Blast_Score=78, Evalue=9e-16, Organism=Escherichia coli, GI1788648, Length=235, Percent_Identity=21.2765957446809, Blast_Score=62, Evalue=5e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR015683 - InterPro: IPR001638 [H]
Pfam domain/function: PF00497 SBP_bac_3 [H]
EC number: NA
Molecular weight: Translated: 33018; Mature: 33018
Theoretical pI: Translated: 6.05; Mature: 6.05
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRGCVVVASLTVAALLACAGAQPGIAQSGAGEGLSPTLAAIKARHVVNLGYRESSPPFSF CCCEEEHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHEEECCCCCCCCHHH LDQAGRPIGYSLELCEAIVEEIGGEIDDPGLRIAYVKVTSDDRIDAVVAGRIDLECGSTT HHHCCCCCCCHHHHHHHHHHHHCCCCCCCCEEEEEEEECCCCCEEEEEEEEEEEECCCCC ANAERSRQVSFSPLIFVAGTKLMVSKGSPVASATDLRGKSVVVTKGTTNEAAMREVDRKS CCCHHCCCCCCCCEEEEECCEEEEECCCCCCCHHCCCCCEEEEECCCCCHHHHHHHHHHH ALGLTVVTATDHEQSYQMLVDGKVDAFATDDILLSGLIARHKAQDKMRIVGDYLSYDPYG CCCEEEEEECCCCCCEEEEECCCCCEEECHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEE IMFRKDEPQLAAVVERAFRRLGSNHDLIPLYNKWFVRRLPTGERLNAAISPQLEQAFHVL EEEECCCCHHHHHHHHHHHHHCCCCCEEECHHHHHHHCCCCCCCCCCCCCHHHHHHHHHH DDSPAANN CCCCCCCC >Mature Secondary Structure MRGCVVVASLTVAALLACAGAQPGIAQSGAGEGLSPTLAAIKARHVVNLGYRESSPPFSF CCCEEEHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHEEECCCCCCCCHHH LDQAGRPIGYSLELCEAIVEEIGGEIDDPGLRIAYVKVTSDDRIDAVVAGRIDLECGSTT HHHCCCCCCCHHHHHHHHHHHHCCCCCCCCEEEEEEEECCCCCEEEEEEEEEEEECCCCC ANAERSRQVSFSPLIFVAGTKLMVSKGSPVASATDLRGKSVVVTKGTTNEAAMREVDRKS CCCHHCCCCCCCCEEEEECCEEEEECCCCCCCHHCCCCCEEEEECCCCCHHHHHHHHHHH ALGLTVVTATDHEQSYQMLVDGKVDAFATDDILLSGLIARHKAQDKMRIVGDYLSYDPYG CCCEEEEEECCCCCCEEEEECCCCCEEECHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEE IMFRKDEPQLAAVVERAFRRLGSNHDLIPLYNKWFVRRLPTGERLNAAISPQLEQAFHVL EEEECCCCHHHHHHHHHHHHHCCCCCEEECHHHHHHHCCCCCCCCCCCCCHHHHHHHHHH DDSPAANN CCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8905232; 9278503; 10493123; 1091635; 1091636 [H]