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The map label for this gene is yoaH [H]

Identifier: 146337797

GI number: 146337797

Start: 708215

End: 709873

Strand: Direct

Name: yoaH [H]

Synonym: BRADO0676

Alternate gene names: 146337797

Gene position: 708215-709873 (Clockwise)

Preceding gene: 146337796

Following gene: 146337798

Centisome position: 9.5

GC content: 65.94

Gene sequence:

>1659_bases
ATGTCGATCCGGTTGAGGATCCTCGCCGTCCTGGGCATCATGCTCACCCTCGCCGGCGGCCTAGCGCTGTACGGATTGCG
GGGCATCACCTCGGCCGGCGATCTCGTGGTTCGTCTTTACGACGGGCCGCTCATGGCGATCAATCACGCACGCTCGGTGC
ACGCCCAGCTGAATGCTGCGATGCTGGTTCTGAGCCGGACCGAGACGGTCGGTACCTCGAAGCAGTCCGCTGACAAGTTC
GAGAAGCTCGTCAAGTCGATCTCGGAGGATCTCGACGTTGTCCGTGAGCGCGTGAAGTCGAGCAGCGTCAACGCCGCCCG
CGAACAGGCCGCCAAGAAGCTGCGTGACTGGTCGGATGCCGCGCTCAAGGTTCTCAAGCCGGCGCCGGACGGCGTCACCG
AGATTCCGACGGCTTTTCTGCTGAGCAAGCTCGGCACCGAGGCGCTGGCCAGCGTGGACGACTTGGTCGAGCTGGTGGCG
GCCTATGGCTATGAATACCGTAATGAGGCCGAAGCGCATGTCGCAGACTCGCGCACGATGATGATGGCGGCCTCGGGGGC
CACGCTGGTGCTGGGCATCCTGCTCGCGCTCGGCTTCGCCTACTCGCTCAGCCGGCCGATCATCTCGCTCGAAAAGGCGA
TGATCCAGCTCGCTGACGGACACTTCGACGTCGTGCTGCCGGGCGTCCGGCGCAAGGACGAGATCGGTCACGTGGCGCGA
GCGGTCGAGCGCTTCAAGCAGCTCGCCGCAGAGCGCGCGCATCAGGAGGCGGCGGCAAAGATCGAGCAGGAGCAGCGCGT
CGCCGAGCAGCGCAAGGCCGATATGCATCGCCTGGCCGATACGTTCGAGAAGGCGATCGGCGATATCGTGAAAACGGTCT
CAGCCACATCCGACACGGTGGAGTCGTCGGCGACCGCGCTGACCGGCACCGCCGATCGCGGGCGGCAGTTGGCCGAGGTC
GTGGCAGGCGCATCCGAGGAAGCCTCGACGAATGTGCAGTCGGTCGCGTCGGCGACCGAGGAGCTTTCGTCCTCTGTCAA
CGAGATCAGCCGTCAGGTGCTGGAATCCGCGCGCATGGCCAATGAGGCGGTCGATCAGGCGCGGACCACCACCGAACGCG
TCGGCGAGCTGTCAAAGGCTGCCAATCGCATCGGCGACGTTGTCGAGCTGATCAATGCGATCGCCGGCCAGACCAACCTC
CTGGCGCTCAATGCGACCATCGAGGCGGCGCGCGCCGGCGAAGCGGGTCGTGGTTTTGCGGTCGTGGCGTCTGAAGTCAA
GGCGCTGGCGGAGCAGACCGCGAAGGCGACCGGTGAGATCGGCCAGCAGGTCGCAGGTATTCAGGCGGCGACTCAGGAGT
CCGTCAGCGCCATCAGCCAGATCAGCTCGACGATCGAGCGATTGTCGGAAGTGTCCTCGGCCATCGCCTCGGCGGTGGAG
GAGCAGGGCGCGGCGACGCAGGAGATCTCGCGCAACATTCAGCACGCGGCGCACGGCACTCAGGAGGTGTCGACGAACAT
CACCGATGTTCGCCGCGGCGCCGCCGATACCGGCCAGGCGTCGACCAGCCTGTTGTCGGCGGCCCAGTCGCTTGCGAACG
ACAGCAAGCGGCTTCGCACCGAGGTCGACAGATTCCTCGCCACGGTCCGAGCGGCCTGA

Upstream 100 bases:

>100_bases
ACCTTCAAGGAGGCCGGCGAGGTGGCGGTGATCTGCGCGATCCATCCGCGCATGAAAATGACCGTCAAGGTCGTCGACTA
AGGCTCTGGAGCACTGACAC

Downstream 100 bases:

>100_bases
AGCAGGTCAAACATGTGCAGCGGCAGGCGGTTCAGCTCGCCCTGCATGTTTATGAGTTCATTCGATTGGCAAGAACCGGC
GAGCTTGTTAGGACGAGGAG

Product: putative methyl-accepting chemotaxis protein (with a HAMP region)

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 552; Mature: 551

Protein sequence:

>552_residues
MSIRLRILAVLGIMLTLAGGLALYGLRGITSAGDLVVRLYDGPLMAINHARSVHAQLNAAMLVLSRTETVGTSKQSADKF
EKLVKSISEDLDVVRERVKSSSVNAAREQAAKKLRDWSDAALKVLKPAPDGVTEIPTAFLLSKLGTEALASVDDLVELVA
AYGYEYRNEAEAHVADSRTMMMAASGATLVLGILLALGFAYSLSRPIISLEKAMIQLADGHFDVVLPGVRRKDEIGHVAR
AVERFKQLAAERAHQEAAAKIEQEQRVAEQRKADMHRLADTFEKAIGDIVKTVSATSDTVESSATALTGTADRGRQLAEV
VAGASEEASTNVQSVASATEELSSSVNEISRQVLESARMANEAVDQARTTTERVGELSKAANRIGDVVELINAIAGQTNL
LALNATIEAARAGEAGRGFAVVASEVKALAEQTAKATGEIGQQVAGIQAATQESVSAISQISSTIERLSEVSSAIASAVE
EQGAATQEISRNIQHAAHGTQEVSTNITDVRRGAADTGQASTSLLSAAQSLANDSKRLRTEVDRFLATVRAA

Sequences:

>Translated_552_residues
MSIRLRILAVLGIMLTLAGGLALYGLRGITSAGDLVVRLYDGPLMAINHARSVHAQLNAAMLVLSRTETVGTSKQSADKF
EKLVKSISEDLDVVRERVKSSSVNAAREQAAKKLRDWSDAALKVLKPAPDGVTEIPTAFLLSKLGTEALASVDDLVELVA
AYGYEYRNEAEAHVADSRTMMMAASGATLVLGILLALGFAYSLSRPIISLEKAMIQLADGHFDVVLPGVRRKDEIGHVAR
AVERFKQLAAERAHQEAAAKIEQEQRVAEQRKADMHRLADTFEKAIGDIVKTVSATSDTVESSATALTGTADRGRQLAEV
VAGASEEASTNVQSVASATEELSSSVNEISRQVLESARMANEAVDQARTTTERVGELSKAANRIGDVVELINAIAGQTNL
LALNATIEAARAGEAGRGFAVVASEVKALAEQTAKATGEIGQQVAGIQAATQESVSAISQISSTIERLSEVSSAIASAVE
EQGAATQEISRNIQHAAHGTQEVSTNITDVRRGAADTGQASTSLLSAAQSLANDSKRLRTEVDRFLATVRAA
>Mature_551_residues
SIRLRILAVLGIMLTLAGGLALYGLRGITSAGDLVVRLYDGPLMAINHARSVHAQLNAAMLVLSRTETVGTSKQSADKFE
KLVKSISEDLDVVRERVKSSSVNAAREQAAKKLRDWSDAALKVLKPAPDGVTEIPTAFLLSKLGTEALASVDDLVELVAA
YGYEYRNEAEAHVADSRTMMMAASGATLVLGILLALGFAYSLSRPIISLEKAMIQLADGHFDVVLPGVRRKDEIGHVARA
VERFKQLAAERAHQEAAAKIEQEQRVAEQRKADMHRLADTFEKAIGDIVKTVSATSDTVESSATALTGTADRGRQLAEVV
AGASEEASTNVQSVASATEELSSSVNEISRQVLESARMANEAVDQARTTTERVGELSKAANRIGDVVELINAIAGQTNLL
ALNATIEAARAGEAGRGFAVVASEVKALAEQTAKATGEIGQQVAGIQAATQESVSAISQISSTIERLSEVSSAIASAVEE
QGAATQEISRNIQHAAHGTQEVSTNITDVRRGAADTGQASTSLLSAAQSLANDSKRLRTEVDRFLATVRAA

Specific function: Mediates Taxis Toward Dipeptides VIa An Interaction With The Periplasmic Dipeptide-Binding Protein. Chemotactic-Signal Transducers Respond To Changes In The Concentration Of Attractants And Repellents In The Environment, Transduce A Signal From The Outsid

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 methyl-accepting transducer domain [H]

Homologues:

Organism=Escherichia coli, GI1788194, Length=288, Percent_Identity=30.9027777777778, Blast_Score=97, Evalue=2e-21,
Organism=Escherichia coli, GI1788195, Length=239, Percent_Identity=31.7991631799163, Blast_Score=92, Evalue=6e-20,
Organism=Escherichia coli, GI2367378, Length=251, Percent_Identity=31.4741035856574, Blast_Score=92, Evalue=1e-19,
Organism=Escherichia coli, GI1787690, Length=232, Percent_Identity=33.6206896551724, Blast_Score=91, Evalue=2e-19,
Organism=Escherichia coli, GI1789453, Length=337, Percent_Identity=27.5964391691395, Blast_Score=82, Evalue=7e-17,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007891
- InterPro:   IPR004090
- InterPro:   IPR004089
- InterPro:   IPR003660 [H]

Pfam domain/function: PF05227 CHASE3; PF00672 HAMP; PF00015 MCPsignal [H]

EC number: NA

Molecular weight: Translated: 58272; Mature: 58141

Theoretical pI: Translated: 5.44; Mature: 5.44

Prosite motif: PS50885 HAMP ; PS50111 CHEMOTAXIS_TRANSDUC_2 ; PS50192 T_SNARE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSIRLRILAVLGIMLTLAGGLALYGLRGITSAGDLVVRLYDGPLMAINHARSVHAQLNAA
CCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHH
MLVLSRTETVGTSKQSADKFEKLVKSISEDLDVVRERVKSSSVNAAREQAAKKLRDWSDA
HHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH
ALKVLKPAPDGVTEIPTAFLLSKLGTEALASVDDLVELVAAYGYEYRNEAEAHVADSRTM
HHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHCCCCHHHHHCCHHH
MMAASGATLVLGILLALGFAYSLSRPIISLEKAMIQLADGHFDVVLPGVRRKDEIGHVAR
HHCCCCHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHCCCCEEEECCCCCHHHHHHHHH
AVERFKQLAAERAHQEAAAKIEQEQRVAEQRKADMHRLADTFEKAIGDIVKTVSATSDTV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ESSATALTGTADRGRQLAEVVAGASEEASTNVQSVASATEELSSSVNEISRQVLESARMA
HHHHHHCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
NEAVDQARTTTERVGELSKAANRIGDVVELINAIAGQTNLLALNATIEAARAGEAGRGFA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECHHHHHHCCCCCCCHH
VVASEVKALAEQTAKATGEIGQQVAGIQAATQESVSAISQISSTIERLSEVSSAIASAVE
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
EQGAATQEISRNIQHAAHGTQEVSTNITDVRRGAADTGQASTSLLSAAQSLANDSKRLRT
HHCCHHHHHHHHHHHHHCCHHHHHCCHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHH
EVDRFLATVRAA
HHHHHHHHHHCC
>Mature Secondary Structure 
SIRLRILAVLGIMLTLAGGLALYGLRGITSAGDLVVRLYDGPLMAINHARSVHAQLNAA
CHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHH
MLVLSRTETVGTSKQSADKFEKLVKSISEDLDVVRERVKSSSVNAAREQAAKKLRDWSDA
HHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH
ALKVLKPAPDGVTEIPTAFLLSKLGTEALASVDDLVELVAAYGYEYRNEAEAHVADSRTM
HHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHCCCCHHHHHCCHHH
MMAASGATLVLGILLALGFAYSLSRPIISLEKAMIQLADGHFDVVLPGVRRKDEIGHVAR
HHCCCCHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHCCCCEEEECCCCCHHHHHHHHH
AVERFKQLAAERAHQEAAAKIEQEQRVAEQRKADMHRLADTFEKAIGDIVKTVSATSDTV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ESSATALTGTADRGRQLAEVVAGASEEASTNVQSVASATEELSSSVNEISRQVLESARMA
HHHHHHCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
NEAVDQARTTTERVGELSKAANRIGDVVELINAIAGQTNLLALNATIEAARAGEAGRGFA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECHHHHHHCCCCCCCHH
VVASEVKALAEQTAKATGEIGQQVAGIQAATQESVSAISQISSTIERLSEVSSAIASAVE
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
EQGAATQEISRNIQHAAHGTQEVSTNITDVRRGAADTGQASTSLLSAAQSLANDSKRLRT
HHCCHHHHHHHHHHHHHCCHHHHHCCHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHH
EVDRFLATVRAA
HHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]