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The map label for this gene is yabI [H]

Identifier: 146337743

GI number: 146337743

Start: 640093

End: 640749

Strand: Reverse

Name: yabI [H]

Synonym: BRADO0615

Alternate gene names: 146337743

Gene position: 640749-640093 (Counterclockwise)

Preceding gene: 146337755

Following gene: 146337741

Centisome position: 8.59

GC content: 67.73

Gene sequence:

>657_bases
GTGGCCCATCTACTCGACCCCCTGATCGCCTTCGTGTCAGCCCATGCGGGGCTGGCCTATCTCACCCTGTTCATGGCGGC
GCTGCTGGAGGCGGTTCCGATCGTGGGCTCGGTGGTCCCGGGCACGACAATTATCCTGGCGCTGAGCGCGCTGATCCCGG
GCGGCGAGCTGACGCTGCAATGGGTGCTGGCGGCCGCCATCCTCGGCGCCGTGATCGGCGATGGCGGCGCGTTCTGGGTC
GGTCATCGCCAGCAGCGCGAGATCCTGACGAGTTGGCCGTTCTCGAACTATCCGCGCCTGGTGGCGCAGAGCGAGGCGTT
CTTCCACCGCTTCGGCACCTTGGCGATCTTCTTCGCCCGGTTCGTGGCGCCGATCCGCGCCGTGGTGCCGATCACCGCGG
GCGCGCTCGACATTCCGCCGGCGCGCTTCTACGCGGTGAATATTCCCGCGATCGTGCTGTGGGCCTGCGCCCACGTGCTG
CCTGGCGTGTTCGCCGTGCAGCTGCTGCATCGCTATGGCGGCATTTCGCATCACAGCCATATCGCGAAGTCGACCTGGAT
CATCGCCGCGGTCGCCGGCACGATCGTGGTCTGGCTGGTGCTGCGGATGGTGCGGAAGCGGCGCGAGACGCAGCTGGCGA
CTGGCTCTGCCGAATAG

Upstream 100 bases:

>100_bases
GCCTCACCAGCACGCCCAGCATTCTGACGTGGCACTCGGGGCCGGGGTTCCTACTTATCGAACAGCTCGTCATGTCTCCG
TCATACCCAGCAGGATCCGC

Downstream 100 bases:

>100_bases
GCGGGGCCGCGCCGCTACAGCGTTTCAAGGCTGGCGGCGCGTCCCGGGATCGGTCCGGTGTAGCGTGCGCGTGGCCGGAT
TAGGCGGCCGAACTGCAATT

Product: putative DedA family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 218; Mature: 217

Protein sequence:

>218_residues
MAHLLDPLIAFVSAHAGLAYLTLFMAALLEAVPIVGSVVPGTTIILALSALIPGGELTLQWVLAAAILGAVIGDGGAFWV
GHRQQREILTSWPFSNYPRLVAQSEAFFHRFGTLAIFFARFVAPIRAVVPITAGALDIPPARFYAVNIPAIVLWACAHVL
PGVFAVQLLHRYGGISHHSHIAKSTWIIAAVAGTIVVWLVLRMVRKRRETQLATGSAE

Sequences:

>Translated_218_residues
MAHLLDPLIAFVSAHAGLAYLTLFMAALLEAVPIVGSVVPGTTIILALSALIPGGELTLQWVLAAAILGAVIGDGGAFWV
GHRQQREILTSWPFSNYPRLVAQSEAFFHRFGTLAIFFARFVAPIRAVVPITAGALDIPPARFYAVNIPAIVLWACAHVL
PGVFAVQLLHRYGGISHHSHIAKSTWIIAAVAGTIVVWLVLRMVRKRRETQLATGSAE
>Mature_217_residues
AHLLDPLIAFVSAHAGLAYLTLFMAALLEAVPIVGSVVPGTTIILALSALIPGGELTLQWVLAAAILGAVIGDGGAFWVG
HRQQREILTSWPFSNYPRLVAQSEAFFHRFGTLAIFFARFVAPIRAVVPITAGALDIPPARFYAVNIPAIVLWACAHVLP
GVFAVQLLHRYGGISHHSHIAKSTWIIAAVAGTIVVWLVLRMVRKRRETQLATGSAE

Specific function: Unknown

COG id: COG0586

COG function: function code S; Uncharacterized membrane-associated protein

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the dedA family [H]

Homologues:

Organism=Escherichia coli, GI1786252, Length=204, Percent_Identity=31.3725490196078, Blast_Score=100, Evalue=1e-22,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR015414 [H]

Pfam domain/function: PF09335 SNARE_assoc [H]

EC number: NA

Molecular weight: Translated: 23412; Mature: 23281

Theoretical pI: Translated: 10.31; Mature: 10.31

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
1.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAHLLDPLIAFVSAHAGLAYLTLFMAALLEAVPIVGSVVPGTTIILALSALIPGGELTLQ
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCHHHHH
WVLAAAILGAVIGDGGAFWVGHRQQREILTSWPFSNYPRLVAQSEAFFHRFGTLAIFFAR
HHHHHHHHHHHHCCCCEEECCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHH
FVAPIRAVVPITAGALDIPPARFYAVNIPAIVLWACAHVLPGVFAVQLLHRYGGISHHSH
HHHHHHHHHHHCCCCCCCCCCCEEEECHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHH
IAKSTWIIAAVAGTIVVWLVLRMVRKRRETQLATGSAE
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
>Mature Secondary Structure 
AHLLDPLIAFVSAHAGLAYLTLFMAALLEAVPIVGSVVPGTTIILALSALIPGGELTLQ
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCHHHHH
WVLAAAILGAVIGDGGAFWVGHRQQREILTSWPFSNYPRLVAQSEAFFHRFGTLAIFFAR
HHHHHHHHHHHHCCCCEEECCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHH
FVAPIRAVVPITAGALDIPPARFYAVNIPAIVLWACAHVLPGVFAVQLLHRYGGISHHSH
HHHHHHHHHHHCCCCCCCCCCCEEEECHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHH
IAKSTWIIAAVAGTIVVWLVLRMVRKRRETQLATGSAE
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 1630901; 9278503 [H]