Definition | Bradyrhizobium sp. ORS278 chromosome, complete genome. |
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Accession | NC_009445 |
Length | 7,456,587 |
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The map label for this gene is marR [C]
Identifier: 146337726
GI number: 146337726
Start: 616673
End: 617116
Strand: Reverse
Name: marR [C]
Synonym: BRADO0598
Alternate gene names: 146337726
Gene position: 617116-616673 (Counterclockwise)
Preceding gene: 146337728
Following gene: 146337724
Centisome position: 8.28
GC content: 65.09
Gene sequence:
>444_bases GTGGCCAAATCGCCCAATCCCAACACCCCCCTCACCGAACATCTCGCCTATCTGCTCGCGCAGGCCAACCGGGAGATCAA CCGGCAGCTGGAATCGCGCCTGAGCACTGAGGGCGTGCCCGTCGAGCAATGGCGCATCCTGAAGGTGCTGTCGGACGGCG AGGGGCACTCGATGGGCGATCTCGCCGAGGCCGTGCTGCTGAACCATCCGACCCTGACCAAGATGATCGACCGGATGGTG TCGGACTCCCTGGTCTACCGCCGCCAGGACGCCCATGACCGCCGCAAGGTGCTGATGTTCATCAGCGAGCGCGGCAAGGC GCTGTGCAAGCGCCTGAACTCGCTCGCCGCCAGCCAGGAGGCGCACATCCTGGAAAACTACGGCGACAAGGCCACCGGCG AGCTGAAGCGGCTGCTGGAGAATTTGATCGACGCGGCGAGCTGA
Upstream 100 bases:
>100_bases TATCCTATTCGAAAATGTTGAATGTTCAAGAATTCGAATGCATATAGATCGGGCAGCGACTGCCGGACATTCATTCAAAT CGGGACCCGCGAAGTTCACC
Downstream 100 bases:
>100_bases GCCGCGGTTGCACTGCAGACCTCAGGGCCAAGCTCCATCCTCCCGTCATTGCGAGCGCAGCGAAGCAATCCAGGGTCCCG CCCACCACCCTGGATTGCTT
Product: MarR family transcriptional regulator
Products: NA
Alternate protein names: Transcriptional Regulator MarR Family; Regulatory Protein MarR; Transcriptional Regulator; MarR Family Regulator; MarR-Family Transcriptional Regulator; TRANSCRIPTIONal REGULATOR MarR Family; Transcriptional Regulator Protein; MarR Family Regulatory Helix-Turn-Helix
Number of amino acids: Translated: 147; Mature: 146
Protein sequence:
>147_residues MAKSPNPNTPLTEHLAYLLAQANREINRQLESRLSTEGVPVEQWRILKVLSDGEGHSMGDLAEAVLLNHPTLTKMIDRMV SDSLVYRRQDAHDRRKVLMFISERGKALCKRLNSLAASQEAHILENYGDKATGELKRLLENLIDAAS
Sequences:
>Translated_147_residues MAKSPNPNTPLTEHLAYLLAQANREINRQLESRLSTEGVPVEQWRILKVLSDGEGHSMGDLAEAVLLNHPTLTKMIDRMV SDSLVYRRQDAHDRRKVLMFISERGKALCKRLNSLAASQEAHILENYGDKATGELKRLLENLIDAAS >Mature_146_residues AKSPNPNTPLTEHLAYLLAQANREINRQLESRLSTEGVPVEQWRILKVLSDGEGHSMGDLAEAVLLNHPTLTKMIDRMVS DSLVYRRQDAHDRRKVLMFISERGKALCKRLNSLAASQEAHILENYGDKATGELKRLLENLIDAAS
Specific function: Repressor Of The Marrab Operon Which Is Involved In The Activation Of Both Antibiotic Resistance And Oxidative Stress Genes. Binds To The Maro Operator/Promoter Site. [C]
COG id: COG1846
COG function: function code K; Transcriptional regulators
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16516; Mature: 16385
Theoretical pI: Translated: 7.73; Mature: 7.73
Prosite motif: PS01117 HTH_MARR_1 ; PS50995 HTH_MARR_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAKSPNPNTPLTEHLAYLLAQANREINRQLESRLSTEGVPVEQWRILKVLSDGEGHSMGD CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCHHH LAEAVLLNHPTLTKMIDRMVSDSLVYRRQDAHDRRKVLMFISERGKALCKRLNSLAASQE HHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AHILENYGDKATGELKRLLENLIDAAS HHHHHHCCCCCHHHHHHHHHHHHHCCC >Mature Secondary Structure AKSPNPNTPLTEHLAYLLAQANREINRQLESRLSTEGVPVEQWRILKVLSDGEGHSMGD CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCHHH LAEAVLLNHPTLTKMIDRMVSDSLVYRRQDAHDRRKVLMFISERGKALCKRLNSLAASQE HHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AHILENYGDKATGELKRLLENLIDAAS HHHHHHCCCCCHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA