| Definition | Bradyrhizobium sp. ORS278 chromosome, complete genome. |
|---|---|
| Accession | NC_009445 |
| Length | 7,456,587 |
Click here to switch to the map view.
The map label for this gene is ptsP [H]
Identifier: 146337704
GI number: 146337704
Start: 588501
End: 590768
Strand: Reverse
Name: ptsP [H]
Synonym: BRADO0573
Alternate gene names: 146337704
Gene position: 590768-588501 (Counterclockwise)
Preceding gene: 146337705
Following gene: 146337703
Centisome position: 7.92
GC content: 67.99
Gene sequence:
>2268_bases ATGCGAAGCACGTCGGGAGGCCCCCGCGTCCTGCTCAGACGGCTTCGCGAGACCATGGCGGAGCAGGTCTCGGCACAGGA GCGGCTCGACAAGATCGTGGTGCTCATCGCGGCCAACATGGTCGCGGAAGTCTGCTCGGTTTATGTGCTGCGCGTCGACA ACACGCTCGAACTCTACGCCACCGAAGGTCTGAACCGCGACGCCGTCCACATGACGGTGCTGAGCGCCCATGAAGGTCTG GTCGGCCTCGTCGCCAGCGAGGCCACCCCGCTCAATTTGAGCGACGCGCAGAATCACCCGGCCTTCTCGTATCGCCCGGA GACTGGCGAGGAAATCTACCACTCCTTCCTGGGCGTGCCGATCCTGCGCGCCGGCAACACGCTCGGCGTGCTCGTGGTGC AGAACCGCGCCAAGCGCACCTATGTCGAGGAAGAGGTCGAAGCGCTGCAGACCACCGCGATGGTGCTCGCCGAGATGATC GCCTCGGGCGAGCTCGCGGCCCTCGCACAGCCAGGTGCCGAGCCGGCCGTGCGGCACTCGGTGCACAAGACCGGGGCGGT GCTGTCGGACGGCATCGCGCTCGGACATGTCGTCCTCCACGAGCCGCGCGTGGTCGTCAACAACTACATCGCCGAGGACC TGCCGAAGGAGATCAAGCGGCTCGACGCCGCGCTGGTCAAGTTGCGCGCCGATCTCGACCGCATGCTGGAGCGCGGCGAC GTCGCCGACGGCGGCGAGCACCGCGAGGTGCTGGAAGCTTATCGGATGTTCGCCAACGACCAGGGCTGGTCGCACAAGCT GCATGAAGCGGTCGCGACCGGCCTGACCGCCGAGGCCGCGGTCGAGCGCGTGCAGTCCGACACCCGCGCCCGCATGCTGC GTTCGACCGATCCGTATTTGCGCGAACGTCTGCACGATCTCGAGGATCTCGGCTACCGGCTGCTGCGCCAACTGGTCGGG CAGGACCATGCGCCGAGTCGCGATCACCTGCCCGACAACGCCATCCTGATCGCCCGCGCGATGGGCCCGGCGGCGCTGCT GGACTACGATCGCAAGCGTCTGCGCGGCCTGGTGCTGGAGGAAGGCACCGCCAACTCGCATGTCGCGATCGTCGCCCGCG CGCTCGGCATCCCCGCGGTCGGCGAGGTGCCGAACGCGCCCGGCATCGCTGATCCCGGCGACGCCATCATCGTCGACGGC ACCTCCGGCTCGATCTATGTGCGGCCGTCGGCGGAGATCGAGTCCGCCTATGCCGAGCGGGTGCGCTTCCGCGCCCGCAG GCAGGCGCAATACAGCGAGCTGCGCAACAAGCCGTGCAAGACAAAGGACGGCCAGCCGGTCGAGCTGATGATCAATGCCG GCCTCGTGATCGACCTGCCGCATATCGAGGACACCGGCAGCGCCGGCATCGGCCTGTTCCGCACCGAGCTGCAGTTCATG GTGTCGGCCAGCCTGCCGCGCTCCAGTGACCAGCTGGCGCTGTATCGCACGGTCCTCGACGCGGCCGGCTCGAAGCCTGT CACGTTCCGGACACTCGACATCGGCGGCGACAAGGCGCTGCCCTACATGGAGACGGTGATCGAGGAGAATCCGGCGCTCG GCTGGCGCGCGATCCGCCTCGGGCTCGATCGCCCGGGCCTGCTGCGCGGCCAGATCCGCGCGCTGCTGCGCGCCGGCGGC GGCCGCTCGTTGCGCATCATGTTCCCGATGATCTCGGAGGTCGCCGAGTTCGACACGGCAAAGGCGATCGTCGAGCGCGA GCTGACTTACCTGCGCCAGCATGGCCACACGCTGCCGGAGCGCGTCGACATCGGCACCATGCTCGAGGTCCCGGCGCTGC TGTACCAGATGGACGAGCTGCTGGCGAAGGTCGACTTCATTTCGGTCGGCTCCAACGACCTGTTCCAGTTCCTGTTCGCC GTCGACCGCGGCAATGCCAAGGTTTCCGAGCGCTTCGACACGCTATCGACGCCGATCCTGCGTGCGCTGCAGGAGATCGT GCGCAAGGCCAAGGCGGCCAAGCGGTCAGTGTCGCTCTGCGGCGAGATGGCCTCCAAGCCGATCGGCGCGCTGGCGCTGA TCGCGCTCGGCTACCGCTCGCTGTCGCTGTCGGCGACCGCGCATGGGCCGGTGAAGGCGATGATCCTAGAGCTCGACGCC GCCAAGGCTGAAGCCAAGATGGCCGAGTGGCTGGCGACGCCGGCCGGCAGCATATCGATGCGGCAGAAGCTGACCGAGTT CGCCGAGAGCGAAGGCCTCGCGCTGTAG
Upstream 100 bases:
>100_bases GGGTGCGGCAGCATGGAATCAAGAAAGCTGTTCGATTTCGCGACTTTAGCGCCAGCTCGGCCGCGCGCCGGTCTGGCCCC AGGAAGGGGGATTGTGCCAC
Downstream 100 bases:
>100_bases CGGGCCAGCCGCGGCCCGCGCGACTTCCGTTCGTATCGTTTGCTCCTACATCAGATTACATCATGTCGTCGCTTCCCGAA GCCAAACTGGACGTCCTGCT
Product: phosphoenolpyruvate-protein phosphotransferase
Products: NA
Alternate protein names: Enzyme I-Ntr; Phosphotransferase system, enzyme I [H]
Number of amino acids: Translated: 755; Mature: 755
Protein sequence:
>755_residues MRSTSGGPRVLLRRLRETMAEQVSAQERLDKIVVLIAANMVAEVCSVYVLRVDNTLELYATEGLNRDAVHMTVLSAHEGL VGLVASEATPLNLSDAQNHPAFSYRPETGEEIYHSFLGVPILRAGNTLGVLVVQNRAKRTYVEEEVEALQTTAMVLAEMI ASGELAALAQPGAEPAVRHSVHKTGAVLSDGIALGHVVLHEPRVVVNNYIAEDLPKEIKRLDAALVKLRADLDRMLERGD VADGGEHREVLEAYRMFANDQGWSHKLHEAVATGLTAEAAVERVQSDTRARMLRSTDPYLRERLHDLEDLGYRLLRQLVG QDHAPSRDHLPDNAILIARAMGPAALLDYDRKRLRGLVLEEGTANSHVAIVARALGIPAVGEVPNAPGIADPGDAIIVDG TSGSIYVRPSAEIESAYAERVRFRARRQAQYSELRNKPCKTKDGQPVELMINAGLVIDLPHIEDTGSAGIGLFRTELQFM VSASLPRSSDQLALYRTVLDAAGSKPVTFRTLDIGGDKALPYMETVIEENPALGWRAIRLGLDRPGLLRGQIRALLRAGG GRSLRIMFPMISEVAEFDTAKAIVERELTYLRQHGHTLPERVDIGTMLEVPALLYQMDELLAKVDFISVGSNDLFQFLFA VDRGNAKVSERFDTLSTPILRALQEIVRKAKAAKRSVSLCGEMASKPIGALALIALGYRSLSLSATAHGPVKAMILELDA AKAEAKMAEWLATPAGSISMRQKLTEFAESEGLAL
Sequences:
>Translated_755_residues MRSTSGGPRVLLRRLRETMAEQVSAQERLDKIVVLIAANMVAEVCSVYVLRVDNTLELYATEGLNRDAVHMTVLSAHEGL VGLVASEATPLNLSDAQNHPAFSYRPETGEEIYHSFLGVPILRAGNTLGVLVVQNRAKRTYVEEEVEALQTTAMVLAEMI ASGELAALAQPGAEPAVRHSVHKTGAVLSDGIALGHVVLHEPRVVVNNYIAEDLPKEIKRLDAALVKLRADLDRMLERGD VADGGEHREVLEAYRMFANDQGWSHKLHEAVATGLTAEAAVERVQSDTRARMLRSTDPYLRERLHDLEDLGYRLLRQLVG QDHAPSRDHLPDNAILIARAMGPAALLDYDRKRLRGLVLEEGTANSHVAIVARALGIPAVGEVPNAPGIADPGDAIIVDG TSGSIYVRPSAEIESAYAERVRFRARRQAQYSELRNKPCKTKDGQPVELMINAGLVIDLPHIEDTGSAGIGLFRTELQFM VSASLPRSSDQLALYRTVLDAAGSKPVTFRTLDIGGDKALPYMETVIEENPALGWRAIRLGLDRPGLLRGQIRALLRAGG GRSLRIMFPMISEVAEFDTAKAIVERELTYLRQHGHTLPERVDIGTMLEVPALLYQMDELLAKVDFISVGSNDLFQFLFA VDRGNAKVSERFDTLSTPILRALQEIVRKAKAAKRSVSLCGEMASKPIGALALIALGYRSLSLSATAHGPVKAMILELDA AKAEAKMAEWLATPAGSISMRQKLTEFAESEGLAL >Mature_755_residues MRSTSGGPRVLLRRLRETMAEQVSAQERLDKIVVLIAANMVAEVCSVYVLRVDNTLELYATEGLNRDAVHMTVLSAHEGL VGLVASEATPLNLSDAQNHPAFSYRPETGEEIYHSFLGVPILRAGNTLGVLVVQNRAKRTYVEEEVEALQTTAMVLAEMI ASGELAALAQPGAEPAVRHSVHKTGAVLSDGIALGHVVLHEPRVVVNNYIAEDLPKEIKRLDAALVKLRADLDRMLERGD VADGGEHREVLEAYRMFANDQGWSHKLHEAVATGLTAEAAVERVQSDTRARMLRSTDPYLRERLHDLEDLGYRLLRQLVG QDHAPSRDHLPDNAILIARAMGPAALLDYDRKRLRGLVLEEGTANSHVAIVARALGIPAVGEVPNAPGIADPGDAIIVDG TSGSIYVRPSAEIESAYAERVRFRARRQAQYSELRNKPCKTKDGQPVELMINAGLVIDLPHIEDTGSAGIGLFRTELQFM VSASLPRSSDQLALYRTVLDAAGSKPVTFRTLDIGGDKALPYMETVIEENPALGWRAIRLGLDRPGLLRGQIRALLRAGG GRSLRIMFPMISEVAEFDTAKAIVERELTYLRQHGHTLPERVDIGTMLEVPALLYQMDELLAKVDFISVGSNDLFQFLFA VDRGNAKVSERFDTLSTPILRALQEIVRKAKAAKRSVSLCGEMASKPIGALALIALGYRSLSLSATAHGPVKAMILELDA AKAEAKMAEWLATPAGSISMRQKLTEFAESEGLAL
Specific function: Component of the phosphoenolpyruvate-dependent nitrogen- metabolic phosphotransferase system (nitrogen-metabolic PTS), that seems to be involved in regulating nitrogen metabolism. Enzyme I- Ntr transfers the phosphoryl group from phosphoenolpyruvate (PEP)
COG id: COG3605
COG function: function code T; Signal transduction protein containing GAF and PtsI domains
Gene ontology:
Cell location: Cytoplasm (Probable) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 GAF domain [H]
Homologues:
Organism=Escherichia coli, GI1789193, Length=751, Percent_Identity=36.2183754993342, Blast_Score=402, Evalue=1e-113, Organism=Escherichia coli, GI1788756, Length=558, Percent_Identity=33.5125448028674, Blast_Score=300, Evalue=2e-82, Organism=Escherichia coli, GI48994992, Length=503, Percent_Identity=32.0079522862823, Blast_Score=269, Evalue=4e-73, Organism=Escherichia coli, GI1788726, Length=539, Percent_Identity=31.1688311688312, Blast_Score=260, Evalue=2e-70,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003018 - InterPro: IPR008279 - InterPro: IPR006318 - InterPro: IPR018274 - InterPro: IPR023151 - InterPro: IPR000121 - InterPro: IPR008731 - InterPro: IPR015813 [H]
Pfam domain/function: PF01590 GAF; PF05524 PEP-utilisers_N; PF00391 PEP-utilizers; PF02896 PEP-utilizers_C [H]
EC number: =2.7.3.9 [H]
Molecular weight: Translated: 82324; Mature: 82324
Theoretical pI: Translated: 6.31; Mature: 6.31
Prosite motif: PS00742 PEP_ENZYMES_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRSTSGGPRVLLRRLRETMAEQVSAQERLDKIVVLIAANMVAEVCSVYVLRVDNTLELYA CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEECCEEEEEE TEGLNRDAVHMTVLSAHEGLVGLVASEATPLNLSDAQNHPAFSYRPETGEEIYHSFLGVP ECCCCCCHHEEEEEHHCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCH ILRAGNTLGVLVVQNRAKRTYVEEEVEALQTTAMVLAEMIASGELAALAQPGAEPAVRHS HEECCCEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHCCCCCCHHHHHH VHKTGAVLSDGIALGHVVLHEPRVVVNNYIAEDLPKEIKRLDAALVKLRADLDRMLERGD HHHHCCHHHCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC VADGGEHREVLEAYRMFANDQGWSHKLHEAVATGLTAEAAVERVQSDTRARMLRSTDPYL CCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCHHH RERLHDLEDLGYRLLRQLVGQDHAPSRDHLPDNAILIARAMGPAALLDYDRKRLRGLVLE HHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEECCCCHHHHHHHHHHHHCCCEE EGTANSHVAIVARALGIPAVGEVPNAPGIADPGDAIIVDGTSGSIYVRPSAEIESAYAER CCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEEEECCCCEEEECCCHHHHHHHHHH VRFRARRQAQYSELRNKPCKTKDGQPVELMINAGLVIDLPHIEDTGSAGIGLFRTELQFM HHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEECCEEEECCCCCCCCCCCCHHHHHHHHHH VSASLPRSSDQLALYRTVLDAAGSKPVTFRTLDIGGDKALPYMETVIEENPALGWRAIRL HHHCCCCCCCHHHHHHHHHHHCCCCCEEEEEEECCCCCCCHHHHHHHHCCCCCCEEEEEE GLDRPGLLRGQIRALLRAGGGRSLRIMFPMISEVAEFDTAKAIVERELTYLRQHGHTLPE CCCCCCHHHHHHHHHHHCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC RVDIGTMLEVPALLYQMDELLAKVDFISVGSNDLFQFLFAVDRGNAKVSERFDTLSTPIL CCCCCHHHHHHHHHHHHHHHHHHHHHEECCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHH RALQEIVRKAKAAKRSVSLCGEMASKPIGALALIALGYRSLSLSATAHGPVKAMILELDA HHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHEEEECCCCCCCEEEEEEHHH AKAEAKMAEWLATPAGSISMRQKLTEFAESEGLAL HHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCC >Mature Secondary Structure MRSTSGGPRVLLRRLRETMAEQVSAQERLDKIVVLIAANMVAEVCSVYVLRVDNTLELYA CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEECCEEEEEE TEGLNRDAVHMTVLSAHEGLVGLVASEATPLNLSDAQNHPAFSYRPETGEEIYHSFLGVP ECCCCCCHHEEEEEHHCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCH ILRAGNTLGVLVVQNRAKRTYVEEEVEALQTTAMVLAEMIASGELAALAQPGAEPAVRHS HEECCCEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHCCCCCCHHHHHH VHKTGAVLSDGIALGHVVLHEPRVVVNNYIAEDLPKEIKRLDAALVKLRADLDRMLERGD HHHHCCHHHCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC VADGGEHREVLEAYRMFANDQGWSHKLHEAVATGLTAEAAVERVQSDTRARMLRSTDPYL CCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCHHH RERLHDLEDLGYRLLRQLVGQDHAPSRDHLPDNAILIARAMGPAALLDYDRKRLRGLVLE HHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEECCCCHHHHHHHHHHHHCCCEE EGTANSHVAIVARALGIPAVGEVPNAPGIADPGDAIIVDGTSGSIYVRPSAEIESAYAER CCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEEEECCCCEEEECCCHHHHHHHHHH VRFRARRQAQYSELRNKPCKTKDGQPVELMINAGLVIDLPHIEDTGSAGIGLFRTELQFM HHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEECCEEEECCCCCCCCCCCCHHHHHHHHHH VSASLPRSSDQLALYRTVLDAAGSKPVTFRTLDIGGDKALPYMETVIEENPALGWRAIRL HHHCCCCCCCHHHHHHHHHHHCCCCCEEEEEEECCCCCCCHHHHHHHHCCCCCCEEEEEE GLDRPGLLRGQIRALLRAGGGRSLRIMFPMISEVAEFDTAKAIVERELTYLRQHGHTLPE CCCCCCHHHHHHHHHHHCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC RVDIGTMLEVPALLYQMDELLAKVDFISVGSNDLFQFLFAVDRGNAKVSERFDTLSTPIL CCCCCHHHHHHHHHHHHHHHHHHHHHEECCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHH RALQEIVRKAKAAKRSVSLCGEMASKPIGALALIALGYRSLSLSATAHGPVKAMILELDA HHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHEEEECCCCCCCEEEEEEHHH AKAEAKMAEWLATPAGSISMRQKLTEFAESEGLAL HHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9278503; 7896715; 8973315 [H]