Definition Bradyrhizobium sp. ORS278 chromosome, complete genome.
Accession NC_009445
Length 7,456,587

Click here to switch to the map view.

The map label for this gene is 146337685

Identifier: 146337685

GI number: 146337685

Start: 568145

End: 570061

Strand: Direct

Name: 146337685

Synonym: BRADO0553

Alternate gene names: NA

Gene position: 568145-570061 (Clockwise)

Preceding gene: 146337681

Following gene: 146337688

Centisome position: 7.62

GC content: 69.17

Gene sequence:

>1917_bases
ATGTGTTGGTCACTCCGATTGCGTGGTTTCCGATGGGGCGGGTTTCTGCTCGCGGCCGCGCTCCTGCTGGTCGGCCACCC
CGCGCTCGCCGACAAACGGGTGGCGCTCGTCATCGGCAATTCCGCCTATCAGAACGTGCCGCAGCTGGCCAACCCCGCCA
ATGACGGCGCGGTGATGACTCAGACGTTCAAGAATGCCGGGTTCGATGTCGTCGACTACCGGCGCGATCTCACCGCGCGC
GAGACCCGGCGGGCGCTGCGCGATTTTGCCGACGCGGCCCGCGATGCCGATATCGCCGTGGTCTATTATGCCGGCCACGG
CATGGAGGTCGAAGGCTCGAACTATCTCATTCCGATCGATGCCAGGCTGGAGCGCGACACCGACGTCTATGACGAGACGC
TGTCGCTCGACCGCATCCTGGTCGCCGTCGAGCCGGCCAAGAAGCTGCGGCTCGTCATTCTCGACGCCTGCCGCGACAAT
CCCTTCACCCGCAACATGCAGCGGACGGTGGCGACCCGCAGCCTCGGCCGCGGTCTTGCCAAGGTCGAGCCGACCAGCCC
GAACACGCTGATCGCCTATTCAGCCAAGGCCGGTTCAACGGCCCAGGATGGCGACGGCAATAACTCGCCGTTCACCATGG
CGCTGTCGCGCCATATCGCGACACCCGGCCTCGATGTCCGCAAGGCGTTCGGCTTCGTCCGCGACGAGGTGCTGAAGTCG
ACCAGCAATCGGCAGGAGCCGTTCGTGTACGGCTCGCTCGGCGGCGAGGACGTGCCGCTCGTGCCTGGCGTGCCGCGCGT
CGTCACCCAGATGCCGGTGACGCCGCCGCCCGCCAATCCGCAGGCCGATATCCGCCGCGACTATGAGCTCGCCATGCAGG
TCGGCAACAAGGGCGCGCTGAACGCTTTCCTGGCGCAATATCCCGACGGATTCTATGCCAGCCTCGCCAAGCTGCAGCTG
GAGAAGCTGACGGCCGAGGAGAACCGCGCCGCGGCGGCCGAGAAGGCACGGGTCACGGAAGCCGAGCGGGCGCGGCTGGC
GTCCGAAGGCGCGCGCAAGGATACGCTGGCCAAGGCGGAAGCCGAGGCCAAGGCGGCCGAGCAGGCGCGTCTCGCGGCCG
AGCGGGCCAATCAGCTGGCTCAGCAGCAGGCGGCGGAGGCCGAACGCAAGCGACAGGAGCAGCAGCTCGCGGCAGCCGAC
AATCCGCGCGCGGCGACCTCACCGGCCGCAGTCCCGCAGCAGGGGCCGCAGGTCGCCTCGCTGACGCCGGCGTCCCAGCC
CGCGGATCTCACCAAGTCGGTGCAACTCGAGCTGCGGCGCGTCGGCTGCCTGACCGACGAGGCCGACGGCGATTGGGGCT
CGGCGTCGCGCCGCTCGCTGTCGCAGTTCAACCGCTACGCCGGCACCAAGCTCGACACCCAGGCCGCGTCGGCCGACGCG
CTGCAGGCGATCCAGCTGAAACAGGCCCGCGTCTGCCCGCTGGTCTGTCCGCACGGCACGAAATCCGATGGCGATCGCTG
CACCCGCATCGTCTGCGCCGAGGGCTCGTTCCTGAACGATGACAACGAGTGCGAAAAGCGCCGCGACAAGAAGCCGGTCG
CCAAGCGCGACAGCAGCGACGACGAGGACGCGGCGCCGCGCCGCCGCACCCGCGCGGTTCCCGAGCCGGGTCTGGCGATG
CCGGCTCCCAACGTTGGCGTCGGGGTCGGCATCGGTGTCGGCGGCGTCGGCCTGGGCGTCGGGATGGCGCCGACCATAGG
CGCCCCCAAGCCGCAGGCGGAGGCGCGGCCCAAGCCGTCGTCGGGCCAGATCTATTGCGACTCCTATATTTGCCGTCCTG
TCAGGCCGGGCTGCCGGCTGGACTTCCGCGGCGGCGGCAACCGCTACGGCAACGCCCATGTCGAGGTTTGCAATTGA

Upstream 100 bases:

>100_bases
GTTCCGGGGATAAAGGCTTGCGTGATTCCGATCACAAGCCGGAAGGGCTGGGCCTGATAGGCAGAGCCTTGAAGATCTCC
CAGGCTGTGGGGTAAATGCG

Downstream 100 bases:

>100_bases
TCAGGACGAGATCGCGCTGGCGGCGATATTGACCATCAGCGCGACGAGGGCGGTGTTGTAGACGAACGAGATGATGCCGT
GAACGGTCGCTGTGCGGCGG

Product: putative caspase (peptidase)

Products: NA

Alternate protein names: Caspase Domain Protein; Caspase-Like Domain- And TPR Repeat-Containing Peptidase; Peptidase C; Caspase-Like Domain-Containing Protein; Peptidase Protein; Caspase Domain-Containing Protein; TPR Repeat-Containing Caspace; GUN4-Like Family; Caspase; Peptidylprolyl Isomerase; Caspase-1 P; ICE-Like Protease

Number of amino acids: Translated: 638; Mature: 638

Protein sequence:

>638_residues
MCWSLRLRGFRWGGFLLAAALLLVGHPALADKRVALVIGNSAYQNVPQLANPANDGAVMTQTFKNAGFDVVDYRRDLTAR
ETRRALRDFADAARDADIAVVYYAGHGMEVEGSNYLIPIDARLERDTDVYDETLSLDRILVAVEPAKKLRLVILDACRDN
PFTRNMQRTVATRSLGRGLAKVEPTSPNTLIAYSAKAGSTAQDGDGNNSPFTMALSRHIATPGLDVRKAFGFVRDEVLKS
TSNRQEPFVYGSLGGEDVPLVPGVPRVVTQMPVTPPPANPQADIRRDYELAMQVGNKGALNAFLAQYPDGFYASLAKLQL
EKLTAEENRAAAAEKARVTEAERARLASEGARKDTLAKAEAEAKAAEQARLAAERANQLAQQQAAEAERKRQEQQLAAAD
NPRAATSPAAVPQQGPQVASLTPASQPADLTKSVQLELRRVGCLTDEADGDWGSASRRSLSQFNRYAGTKLDTQAASADA
LQAIQLKQARVCPLVCPHGTKSDGDRCTRIVCAEGSFLNDDNECEKRRDKKPVAKRDSSDDEDAAPRRRTRAVPEPGLAM
PAPNVGVGVGIGVGGVGLGVGMAPTIGAPKPQAEARPKPSSGQIYCDSYICRPVRPGCRLDFRGGGNRYGNAHVEVCN

Sequences:

>Translated_638_residues
MCWSLRLRGFRWGGFLLAAALLLVGHPALADKRVALVIGNSAYQNVPQLANPANDGAVMTQTFKNAGFDVVDYRRDLTAR
ETRRALRDFADAARDADIAVVYYAGHGMEVEGSNYLIPIDARLERDTDVYDETLSLDRILVAVEPAKKLRLVILDACRDN
PFTRNMQRTVATRSLGRGLAKVEPTSPNTLIAYSAKAGSTAQDGDGNNSPFTMALSRHIATPGLDVRKAFGFVRDEVLKS
TSNRQEPFVYGSLGGEDVPLVPGVPRVVTQMPVTPPPANPQADIRRDYELAMQVGNKGALNAFLAQYPDGFYASLAKLQL
EKLTAEENRAAAAEKARVTEAERARLASEGARKDTLAKAEAEAKAAEQARLAAERANQLAQQQAAEAERKRQEQQLAAAD
NPRAATSPAAVPQQGPQVASLTPASQPADLTKSVQLELRRVGCLTDEADGDWGSASRRSLSQFNRYAGTKLDTQAASADA
LQAIQLKQARVCPLVCPHGTKSDGDRCTRIVCAEGSFLNDDNECEKRRDKKPVAKRDSSDDEDAAPRRRTRAVPEPGLAM
PAPNVGVGVGIGVGGVGLGVGMAPTIGAPKPQAEARPKPSSGQIYCDSYICRPVRPGCRLDFRGGGNRYGNAHVEVCN
>Mature_638_residues
MCWSLRLRGFRWGGFLLAAALLLVGHPALADKRVALVIGNSAYQNVPQLANPANDGAVMTQTFKNAGFDVVDYRRDLTAR
ETRRALRDFADAARDADIAVVYYAGHGMEVEGSNYLIPIDARLERDTDVYDETLSLDRILVAVEPAKKLRLVILDACRDN
PFTRNMQRTVATRSLGRGLAKVEPTSPNTLIAYSAKAGSTAQDGDGNNSPFTMALSRHIATPGLDVRKAFGFVRDEVLKS
TSNRQEPFVYGSLGGEDVPLVPGVPRVVTQMPVTPPPANPQADIRRDYELAMQVGNKGALNAFLAQYPDGFYASLAKLQL
EKLTAEENRAAAAEKARVTEAERARLASEGARKDTLAKAEAEAKAAEQARLAAERANQLAQQQAAEAERKRQEQQLAAAD
NPRAATSPAAVPQQGPQVASLTPASQPADLTKSVQLELRRVGCLTDEADGDWGSASRRSLSQFNRYAGTKLDTQAASADA
LQAIQLKQARVCPLVCPHGTKSDGDRCTRIVCAEGSFLNDDNECEKRRDKKPVAKRDSSDDEDAAPRRRTRAVPEPGLAM
PAPNVGVGVGIGVGGVGLGVGMAPTIGAPKPQAEARPKPSSGQIYCDSYICRPVRPGCRLDFRGGGNRYGNAHVEVCN

Specific function: Unknown

COG id: COG4249

COG function: function code R; Uncharacterized protein containing caspase domain

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 68579; Mature: 68579

Theoretical pI: Translated: 8.51; Mature: 8.51

Prosite motif: PS50208 CASPASE_P20

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MCWSLRLRGFRWGGFLLAAALLLVGHPALADKRVALVIGNSAYQNVPQLANPANDGAVMT
CCEEEEECCEECHHHHHHHHHHHHCCCCCCCCEEEEEECCHHHHCCHHHCCCCCCCCEEH
QTFKNAGFDVVDYRRDLTARETRRALRDFADAARDADIAVVYYAGHGMEVEGSNYLIPID
HHHHHCCCCHHHHHHCCHHHHHHHHHHHHHHHHCCCCEEEEEEECCCEEECCCCEEEEEC
ARLERDTDVYDETLSLDRILVAVEPAKKLRLVILDACRDNPFTRNMQRTVATRSLGRGLA
CCCCCCCHHHHHHHCCCEEEEEECCCHHEEEEEEECCCCCCCHHHHHHHHHHHHHHCCCE
KVEPTSPNTLIAYSAKAGSTAQDGDGNNSPFTMALSRHIATPGLDVRKAFGFVRDEVLKS
EECCCCCCEEEEEECCCCCCCCCCCCCCCCEEEEEHHHHCCCCCHHHHHHHHHHHHHHHH
TSNRQEPFVYGSLGGEDVPLVPGVPRVVTQMPVTPPPANPQADIRRDYELAMQVGNKGAL
CCCCCCCEEEECCCCCCCCCCCCCHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHCCCHHH
NAFLAQYPDGFYASLAKLQLEKLTAEENRAAAAEKARVTEAERARLASEGARKDTLAKAE
HHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHH
AEAKAAEQARLAAERANQLAQQQAAEAERKRQEQQLAAADNPRAATSPAAVPQQGPQVAS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEE
LTPASQPADLTKSVQLELRRVGCLTDEADGDWGSASRRSLSQFNRYAGTKLDTQAASADA
CCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCHHHCCHHH
LQAIQLKQARVCPLVCPHGTKSDGDRCTRIVCAEGSFLNDDNECEKRRDKKPVAKRDSSD
HHHHHHHHHCCCEEECCCCCCCCCCCEEEEEEECCCCCCCCHHHHHHHCCCCCCCCCCCC
DEDAAPRRRTRAVPEPGLAMPAPNVGVGVGIGVGGVGLGVGMAPTIGAPKPQAEARPKPS
CCCCCCHHHHCCCCCCCCCCCCCCCCCEEECCCCCHHHCCCCCCCCCCCCCCCCCCCCCC
SGQIYCDSYICRPVRPGCRLDFRGGGNRYGNAHVEVCN
CCCEEECCEECCCCCCCCEEEECCCCCCCCCEEEEECC
>Mature Secondary Structure
MCWSLRLRGFRWGGFLLAAALLLVGHPALADKRVALVIGNSAYQNVPQLANPANDGAVMT
CCEEEEECCEECHHHHHHHHHHHHCCCCCCCCEEEEEECCHHHHCCHHHCCCCCCCCEEH
QTFKNAGFDVVDYRRDLTARETRRALRDFADAARDADIAVVYYAGHGMEVEGSNYLIPID
HHHHHCCCCHHHHHHCCHHHHHHHHHHHHHHHHCCCCEEEEEEECCCEEECCCCEEEEEC
ARLERDTDVYDETLSLDRILVAVEPAKKLRLVILDACRDNPFTRNMQRTVATRSLGRGLA
CCCCCCCHHHHHHHCCCEEEEEECCCHHEEEEEEECCCCCCCHHHHHHHHHHHHHHCCCE
KVEPTSPNTLIAYSAKAGSTAQDGDGNNSPFTMALSRHIATPGLDVRKAFGFVRDEVLKS
EECCCCCCEEEEEECCCCCCCCCCCCCCCCEEEEEHHHHCCCCCHHHHHHHHHHHHHHHH
TSNRQEPFVYGSLGGEDVPLVPGVPRVVTQMPVTPPPANPQADIRRDYELAMQVGNKGAL
CCCCCCCEEEECCCCCCCCCCCCCHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHCCCHHH
NAFLAQYPDGFYASLAKLQLEKLTAEENRAAAAEKARVTEAERARLASEGARKDTLAKAE
HHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHH
AEAKAAEQARLAAERANQLAQQQAAEAERKRQEQQLAAADNPRAATSPAAVPQQGPQVAS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEE
LTPASQPADLTKSVQLELRRVGCLTDEADGDWGSASRRSLSQFNRYAGTKLDTQAASADA
CCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCHHHCCHHH
LQAIQLKQARVCPLVCPHGTKSDGDRCTRIVCAEGSFLNDDNECEKRRDKKPVAKRDSSD
HHHHHHHHHCCCEEECCCCCCCCCCCEEEEEEECCCCCCCCHHHHHHHCCCCCCCCCCCC
DEDAAPRRRTRAVPEPGLAMPAPNVGVGVGIGVGGVGLGVGMAPTIGAPKPQAEARPKPS
CCCCCCHHHHCCCCCCCCCCCCCCCCCEEECCCCCHHHCCCCCCCCCCCCCCCCCCCCCC
SGQIYCDSYICRPVRPGCRLDFRGGGNRYGNAHVEVCN
CCCEEECCEECCCCCCCCEEEECCCCCCCCCEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA