Definition Bradyrhizobium sp. ORS278 chromosome, complete genome.
Accession NC_009445
Length 7,456,587

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The map label for this gene is limB [H]

Identifier: 146337642

GI number: 146337642

Start: 512329

End: 513567

Strand: Reverse

Name: limB [H]

Synonym: BRADO0508

Alternate gene names: 146337642

Gene position: 513567-512329 (Counterclockwise)

Preceding gene: 146337644

Following gene: 146337640

Centisome position: 6.89

GC content: 66.83

Gene sequence:

>1239_bases
ATGGCGCGGCTCAAGTTCGGCGCATTCCTCGCTCCGCATCATCCGATCGGCGAGCATCCGATGCTGCAATTCCGTCGCGA
CCTCGATCTGGTCTCGCAGCTCGACGAGCTCGGCTATGACGAGTTCTGGTGCGGCGAGCATCATTCGAGCGGCTGGGAGA
TGATCGCCTCGCCCGAGATGTTCCTCGCCGCCGCCGGCGAGCGCACCAAGCGCATCCGGCTCGGCACCGGCGTCATCTCG
CTGCCGTACCATCATCCCTTCAACGTCGCGCAGCGCATGGTGCAGCTCGACCACATGACCGGCGGCCGCGCCATCTTCGG
CTCCGGCCCCGGCGCGCTCGCCTCGGATGCGCACACACTCGGCATCGACCCGATGACGCAGCGCGACCGCCAGGACGAGG
CGATCGCCATCATCCGCCGGCTGTTCAACGGCGAGCGCGTCACCGCCAAGAGCGACTGGTTCACGATGAACGACGCCGCG
CTGCAGATCCTGCCGCTGCAGGAGGACATGCCGTTCGTCGTGGCGTCGCAGATCTCACCGTCGGGCATGACGCTCGCCGG
CAAATACGGCATCGGCATCATCTCGCTCGGCTCGATGTCGACGCAGGGCTTGATGGCGCTGCCTCAGCAATGGGAGTTCG
CCGAGGACGCCGCGAAGAAGCACGGCACCACGGTGAGCCGCGCCAATTGGCGCGTGCTATTGTCCTGGCACATCGCCGAG
ACGCGCGAGCAGGCGCGGCGCGAGGCCGGTGCCGGGCTGATGCGCTGGCACAACGAGTACAATGTCGGCACCTTGATGCG
GCCGGGCCTCAAGACCTTCGCCTCGCCCGACGAAGCCGTCGACAAGACCGCCTTCGTCGAAGGCGCGGCTTCGACGATCG
GCACGCCTGACGATCTCGTCAAGACGATCAAGAATCTGATGCAGGTGTCCGGCGGCGTCGGCGCCATCATCGGCTTCGTG
CACGACTGGGCCAATCCGGAGAATACGCGGCGCAGCTGGGACATGGTCGCGCGCTACGTCGTGCCGGAGATCAACGGCTA
TATCGACGGCCTGCGCCGCTCGCAGAAATTCGTCATCGAGAACCGCGCCATCTTCGAGCGCGCGGGGCAGGCGGTGATGG
CCAAGATCATGGACAACGACAAGGCGGCTGCGGCGCTGTCGCAGACGGGCCCGGGACGGATCGCGATCCCCGCGGTCAAT
GCGCCGGACCTGCAGGAGGCGGCGAAGCGCCGACGATGA

Upstream 100 bases:

>100_bases
ATGCACTGCTCGCGAATGACAGCAAGATGATTGCCTGCGCACGGCGCGCCAATTAGCCTCAACACCAAGCAACGATGATA
TTCCATTCGGGAGAAAACAG

Downstream 100 bases:

>100_bases
ACGAATAACGTAGGGCGGATCAGCGCAGCGTAATCCGCCGCGTCTCCGCAAACGAGATCCGGTTGTCTTGGCTACAGGGC
CGGGACCGCATGAGCCAATC

Product: putative alkanal monooxygenase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 412; Mature: 411

Protein sequence:

>412_residues
MARLKFGAFLAPHHPIGEHPMLQFRRDLDLVSQLDELGYDEFWCGEHHSSGWEMIASPEMFLAAAGERTKRIRLGTGVIS
LPYHHPFNVAQRMVQLDHMTGGRAIFGSGPGALASDAHTLGIDPMTQRDRQDEAIAIIRRLFNGERVTAKSDWFTMNDAA
LQILPLQEDMPFVVASQISPSGMTLAGKYGIGIISLGSMSTQGLMALPQQWEFAEDAAKKHGTTVSRANWRVLLSWHIAE
TREQARREAGAGLMRWHNEYNVGTLMRPGLKTFASPDEAVDKTAFVEGAASTIGTPDDLVKTIKNLMQVSGGVGAIIGFV
HDWANPENTRRSWDMVARYVVPEINGYIDGLRRSQKFVIENRAIFERAGQAVMAKIMDNDKAAAALSQTGPGRIAIPAVN
APDLQEAAKRRR

Sequences:

>Translated_412_residues
MARLKFGAFLAPHHPIGEHPMLQFRRDLDLVSQLDELGYDEFWCGEHHSSGWEMIASPEMFLAAAGERTKRIRLGTGVIS
LPYHHPFNVAQRMVQLDHMTGGRAIFGSGPGALASDAHTLGIDPMTQRDRQDEAIAIIRRLFNGERVTAKSDWFTMNDAA
LQILPLQEDMPFVVASQISPSGMTLAGKYGIGIISLGSMSTQGLMALPQQWEFAEDAAKKHGTTVSRANWRVLLSWHIAE
TREQARREAGAGLMRWHNEYNVGTLMRPGLKTFASPDEAVDKTAFVEGAASTIGTPDDLVKTIKNLMQVSGGVGAIIGFV
HDWANPENTRRSWDMVARYVVPEINGYIDGLRRSQKFVIENRAIFERAGQAVMAKIMDNDKAAAALSQTGPGRIAIPAVN
APDLQEAAKRRR
>Mature_411_residues
ARLKFGAFLAPHHPIGEHPMLQFRRDLDLVSQLDELGYDEFWCGEHHSSGWEMIASPEMFLAAAGERTKRIRLGTGVISL
PYHHPFNVAQRMVQLDHMTGGRAIFGSGPGALASDAHTLGIDPMTQRDRQDEAIAIIRRLFNGERVTAKSDWFTMNDAAL
QILPLQEDMPFVVASQISPSGMTLAGKYGIGIISLGSMSTQGLMALPQQWEFAEDAAKKHGTTVSRANWRVLLSWHIAET
REQARREAGAGLMRWHNEYNVGTLMRPGLKTFASPDEAVDKTAFVEGAASTIGTPDDLVKTIKNLMQVSGGVGAIIGFVH
DWANPENTRRSWDMVARYVVPEINGYIDGLRRSQKFVIENRAIFERAGQAVMAKIMDNDKAAAALSQTGPGRIAIPAVNA
PDLQEAAKRRR

Specific function: Acts on both enantiomers of limonene by their NAD- dependent epoxidation at the 1,2 double bond forming limonene-1,2- epoxide [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the bacterial luciferase oxidoreductase family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011251
- InterPro:   IPR016048 [H]

Pfam domain/function: PF00296 Bac_luciferase [H]

EC number: =1.14.13.107 [H]

Molecular weight: Translated: 45423; Mature: 45292

Theoretical pI: Translated: 7.50; Mature: 7.50

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
4.4 %Met     (Translated Protein)
4.6 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
4.1 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MARLKFGAFLAPHHPIGEHPMLQFRRDLDLVSQLDELGYDEFWCGEHHSSGWEMIASPEM
CCCCCCCCEECCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCEECCCCCCCCCCEECCCCE
FLAAAGERTKRIRLGTGVISLPYHHPFNVAQRMVQLDHMTGGRAIFGSGPGALASDAHTL
EEEECCCCCCEEEECCCEEECCCCCCHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCC
GIDPMTQRDRQDEAIAIIRRLFNGERVTAKSDWFTMNDAALQILPLQEDMPFVVASQISP
CCCCCCCCCCHHHHHHHHHHHHCCCEEEECCCCEEECCCEEEEEECCCCCCEEEEECCCC
SGMTLAGKYGIGIISLGSMSTQGLMALPQQWEFAEDAAKKHGTTVSRANWRVLLSWHIAE
CCCEEEECCCEEEEEECCCCCCCHHHCCCCCCHHHHHHHHCCCEEECCCEEEEEEEHHHH
TREQARREAGAGLMRWHNEYNVGTLMRPGLKTFASPDEAVDKTAFVEGAASTIGTPDDLV
HHHHHHHHHCCHHHHHCCCCCCCCEECCCHHHHCCCHHHHHHHHHHCCHHHCCCCHHHHH
KTIKNLMQVSGGVGAIIGFVHDWANPENTRRSWDMVARYVVPEINGYIDGLRRSQKFVIE
HHHHHHHHHCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
NRAIFERAGQAVMAKIMDNDKAAAALSQTGPGRIAIPAVNAPDLQEAAKRRR
HHHHHHHHHHHHHHHHHCCCHHHHHHHCCCCCEEEEECCCCCCHHHHHHHCC
>Mature Secondary Structure 
ARLKFGAFLAPHHPIGEHPMLQFRRDLDLVSQLDELGYDEFWCGEHHSSGWEMIASPEM
CCCCCCCEECCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCEECCCCCCCCCCEECCCCE
FLAAAGERTKRIRLGTGVISLPYHHPFNVAQRMVQLDHMTGGRAIFGSGPGALASDAHTL
EEEECCCCCCEEEECCCEEECCCCCCHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCC
GIDPMTQRDRQDEAIAIIRRLFNGERVTAKSDWFTMNDAALQILPLQEDMPFVVASQISP
CCCCCCCCCCHHHHHHHHHHHHCCCEEEECCCCEEECCCEEEEEECCCCCCEEEEECCCC
SGMTLAGKYGIGIISLGSMSTQGLMALPQQWEFAEDAAKKHGTTVSRANWRVLLSWHIAE
CCCEEEECCCEEEEEECCCCCCCHHHCCCCCCHHHHHHHHCCCEEECCCEEEEEEEHHHH
TREQARREAGAGLMRWHNEYNVGTLMRPGLKTFASPDEAVDKTAFVEGAASTIGTPDDLV
HHHHHHHHHCCHHHHHCCCCCCCCEECCCHHHHCCCHHHHHHHHHHCCHHHCCCCHHHHH
KTIKNLMQVSGGVGAIIGFVHDWANPENTRRSWDMVARYVVPEINGYIDGLRRSQKFVIE
HHHHHHHHHCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
NRAIFERAGQAVMAKIMDNDKAAAALSQTGPGRIAIPAVNAPDLQEAAKRRR
HHHHHHHHHHHHHHHHHCCCHHHHHHHCCCCCEEEEECCCCCCHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA