| Definition | Bradyrhizobium sp. ORS278 chromosome, complete genome. |
|---|---|
| Accession | NC_009445 |
| Length | 7,456,587 |
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The map label for this gene is 146337637
Identifier: 146337637
GI number: 146337637
Start: 506512
End: 507480
Strand: Reverse
Name: 146337637
Synonym: BRADO0502
Alternate gene names: NA
Gene position: 507480-506512 (Counterclockwise)
Preceding gene: 146337639
Following gene: 146337636
Centisome position: 6.81
GC content: 66.36
Gene sequence:
>969_bases ATGTCCATGACGCGACTCATCGAGGACATCAAGCAAGTCTGGCGCGGCGAGCAGCAGCCATCTCTGGTCTGGAGCTGCAG CTTCGCAGCCGCCTGCCTGCTCATCGCAACCGCAATCCGCTACGGCCTGGCTCACCTGCGGCCCGACGTGTTCTTCACGC CCTACATGCCCGCGGTGTTCTTCGCGACAGCGATGGGCGGCTCCGGCGTCGGCCTGGCGACGGCCATCCTTGGTGCGGGG CTGGGGCTCGCGCTCGACTTCAACCATGGCCCGGTCGATGGCGCGCGGCTGGCGCTGATGGCGATGTATCTCGTCGTGGC GGGGCTGGTGATCTGGGGCGTCAATCACTATCGCGGCCTGGCCGCCAAGCAGCGCGAGATCGCGCGGCGCCTGATCGAGG AGGAGCAGTATCGCAAGCTGCTGGTGGACGAGCTGCACCACCGGCTCAAGAACAAGACGTCCACCATCCACGCCGTTCTG CATCAGGTGCTGCATGACCAGCCGCAGGTCTGGGGCCGCATCGATCAGCGCATCCGAGCGCTCGCGACCGCCGACGATCT CATCGCGCGCGCCGACGGACAGGGCTGCGACCTCAAGGATCTCTTGATGTCGGAGCTCGGGCCTTACGGCCATGTGCGCT TCGAGCTCAACGGCGATTCGCTGTTCCTGCCGGCCAAGCTCGCGGTCAGCCTGGCGCTGATCTTCCACGAGCTGGCGACG AACGCGGGCAAATACGGCGCCTTCGCCTCGCCGCGCGGCTTCCTGCAGGTGTCGTGGACGATGCAGGACGACCGGCTCAA GCTGACCTGGGACGAGGCCGAAGGTCCGGCTCTCGGCGAGATCGGCAAGCCCGGTTTCGGCACCAAGCTGCTCAAGGCCG CGCTGTCGTCGTTCGATGGCAGGACCGAGACCACCTATCTCGCGACGGGTATTCACTGCACCATGCAGTGCCGCGTGCCA CCAAGCTGA
Upstream 100 bases:
>100_bases TCGAGCGGACCGAATTACAACATACGCGCGGCAACTTCCATCAACCGGACAAATTACCGCCACGCTGGCCTTAATTTGGT TGCGCGCTTGAGGCTCATGG
Downstream 100 bases:
>100_bases GGCGGCGGCGACCGGCAAATTTTGCCTACATCTTTCGACGGGGGCGGGCTGCCGGTGTCATCGGTCAAATTGAGGATCCG TTAATGACGCCGCGGCACAA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 322; Mature: 321
Protein sequence:
>322_residues MSMTRLIEDIKQVWRGEQQPSLVWSCSFAAACLLIATAIRYGLAHLRPDVFFTPYMPAVFFATAMGGSGVGLATAILGAG LGLALDFNHGPVDGARLALMAMYLVVAGLVIWGVNHYRGLAAKQREIARRLIEEEQYRKLLVDELHHRLKNKTSTIHAVL HQVLHDQPQVWGRIDQRIRALATADDLIARADGQGCDLKDLLMSELGPYGHVRFELNGDSLFLPAKLAVSLALIFHELAT NAGKYGAFASPRGFLQVSWTMQDDRLKLTWDEAEGPALGEIGKPGFGTKLLKAALSSFDGRTETTYLATGIHCTMQCRVP PS
Sequences:
>Translated_322_residues MSMTRLIEDIKQVWRGEQQPSLVWSCSFAAACLLIATAIRYGLAHLRPDVFFTPYMPAVFFATAMGGSGVGLATAILGAG LGLALDFNHGPVDGARLALMAMYLVVAGLVIWGVNHYRGLAAKQREIARRLIEEEQYRKLLVDELHHRLKNKTSTIHAVL HQVLHDQPQVWGRIDQRIRALATADDLIARADGQGCDLKDLLMSELGPYGHVRFELNGDSLFLPAKLAVSLALIFHELAT NAGKYGAFASPRGFLQVSWTMQDDRLKLTWDEAEGPALGEIGKPGFGTKLLKAALSSFDGRTETTYLATGIHCTMQCRVP PS >Mature_321_residues SMTRLIEDIKQVWRGEQQPSLVWSCSFAAACLLIATAIRYGLAHLRPDVFFTPYMPAVFFATAMGGSGVGLATAILGAGL GLALDFNHGPVDGARLALMAMYLVVAGLVIWGVNHYRGLAAKQREIARRLIEEEQYRKLLVDELHHRLKNKTSTIHAVLH QVLHDQPQVWGRIDQRIRALATADDLIARADGQGCDLKDLLMSELGPYGHVRFELNGDSLFLPAKLAVSLALIFHELATN AGKYGAFASPRGFLQVSWTMQDDRLKLTWDEAEGPALGEIGKPGFGTKLLKAALSSFDGRTETTYLATGIHCTMQCRVPP S
Specific function: Photosensitive kinase that is involved in increased bacterial virulence upon exposure to light. Once ejected from an infected animal host, sunlight acts as an environmental signal that increases the virulence of the bacterium, preparing it for infection o
COG id: COG3920
COG function: function code T; Signal transduction histidine kinase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 1 PAS (PER-ARNT-SIM) domain [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001610 - InterPro: IPR000014 - InterPro: IPR000700 - InterPro: IPR013767 - InterPro: IPR013655 - InterPro: IPR011102 [H]
Pfam domain/function: PF07536 HWE_HK; PF00989 PAS; PF08447 PAS_3 [H]
EC number: =2.7.13.3 [H]
Molecular weight: Translated: 35295; Mature: 35164
Theoretical pI: Translated: 7.96; Mature: 7.96
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSMTRLIEDIKQVWRGEQQPSLVWSCSFAAACLLIATAIRYGLAHLRPDVFFTPYMPAVF CCHHHHHHHHHHHHCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHCCCCEECCCHHHHH FATAMGGSGVGLATAILGAGLGLALDFNHGPVDGARLALMAMYLVVAGLVIWGVNHYRGL HHHHCCCCCHHHHHHHHHCCCCEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH AAKQREIARRLIEEEQYRKLLVDELHHRLKNKTSTIHAVLHQVLHDQPQVWGRIDQRIRA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCHHHHHHHHHHHHH LATADDLIARADGQGCDLKDLLMSELGPYGHVRFELNGDSLFLPAKLAVSLALIFHELAT HHHHHHHHHHCCCCCCCHHHHHHHHCCCCCEEEEEECCCEEEEHHHHHHHHHHHHHHHHH NAGKYGAFASPRGFLQVSWTMQDDRLKLTWDEAEGPALGEIGKPGFGTKLLKAALSSFDG CCCCCCCCCCCCCCEEEEEEEECCEEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHCCC RTETTYLATGIHCTMQCRVPPS CCCEEEEEECEEEEEEECCCCC >Mature Secondary Structure SMTRLIEDIKQVWRGEQQPSLVWSCSFAAACLLIATAIRYGLAHLRPDVFFTPYMPAVF CHHHHHHHHHHHHCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHCCCCEECCCHHHHH FATAMGGSGVGLATAILGAGLGLALDFNHGPVDGARLALMAMYLVVAGLVIWGVNHYRGL HHHHCCCCCHHHHHHHHHCCCCEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH AAKQREIARRLIEEEQYRKLLVDELHHRLKNKTSTIHAVLHQVLHDQPQVWGRIDQRIRA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCHHHHHHHHHHHHH LATADDLIARADGQGCDLKDLLMSELGPYGHVRFELNGDSLFLPAKLAVSLALIFHELAT HHHHHHHHHHCCCCCCCHHHHHHHHCCCCCEEEEEECCCEEEEHHHHHHHHHHHHHHHHH NAGKYGAFASPRGFLQVSWTMQDDRLKLTWDEAEGPALGEIGKPGFGTKLLKAALSSFDG CCCCCCCCCCCCCCEEEEEEEECCEEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHCCC RTETTYLATGIHCTMQCRVPPS CCCEEEEEECEEEEEEECCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA