Definition Bradyrhizobium sp. ORS278 chromosome, complete genome.
Accession NC_009445
Length 7,456,587

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The map label for this gene is 146337637

Identifier: 146337637

GI number: 146337637

Start: 506512

End: 507480

Strand: Reverse

Name: 146337637

Synonym: BRADO0502

Alternate gene names: NA

Gene position: 507480-506512 (Counterclockwise)

Preceding gene: 146337639

Following gene: 146337636

Centisome position: 6.81

GC content: 66.36

Gene sequence:

>969_bases
ATGTCCATGACGCGACTCATCGAGGACATCAAGCAAGTCTGGCGCGGCGAGCAGCAGCCATCTCTGGTCTGGAGCTGCAG
CTTCGCAGCCGCCTGCCTGCTCATCGCAACCGCAATCCGCTACGGCCTGGCTCACCTGCGGCCCGACGTGTTCTTCACGC
CCTACATGCCCGCGGTGTTCTTCGCGACAGCGATGGGCGGCTCCGGCGTCGGCCTGGCGACGGCCATCCTTGGTGCGGGG
CTGGGGCTCGCGCTCGACTTCAACCATGGCCCGGTCGATGGCGCGCGGCTGGCGCTGATGGCGATGTATCTCGTCGTGGC
GGGGCTGGTGATCTGGGGCGTCAATCACTATCGCGGCCTGGCCGCCAAGCAGCGCGAGATCGCGCGGCGCCTGATCGAGG
AGGAGCAGTATCGCAAGCTGCTGGTGGACGAGCTGCACCACCGGCTCAAGAACAAGACGTCCACCATCCACGCCGTTCTG
CATCAGGTGCTGCATGACCAGCCGCAGGTCTGGGGCCGCATCGATCAGCGCATCCGAGCGCTCGCGACCGCCGACGATCT
CATCGCGCGCGCCGACGGACAGGGCTGCGACCTCAAGGATCTCTTGATGTCGGAGCTCGGGCCTTACGGCCATGTGCGCT
TCGAGCTCAACGGCGATTCGCTGTTCCTGCCGGCCAAGCTCGCGGTCAGCCTGGCGCTGATCTTCCACGAGCTGGCGACG
AACGCGGGCAAATACGGCGCCTTCGCCTCGCCGCGCGGCTTCCTGCAGGTGTCGTGGACGATGCAGGACGACCGGCTCAA
GCTGACCTGGGACGAGGCCGAAGGTCCGGCTCTCGGCGAGATCGGCAAGCCCGGTTTCGGCACCAAGCTGCTCAAGGCCG
CGCTGTCGTCGTTCGATGGCAGGACCGAGACCACCTATCTCGCGACGGGTATTCACTGCACCATGCAGTGCCGCGTGCCA
CCAAGCTGA

Upstream 100 bases:

>100_bases
TCGAGCGGACCGAATTACAACATACGCGCGGCAACTTCCATCAACCGGACAAATTACCGCCACGCTGGCCTTAATTTGGT
TGCGCGCTTGAGGCTCATGG

Downstream 100 bases:

>100_bases
GGCGGCGGCGACCGGCAAATTTTGCCTACATCTTTCGACGGGGGCGGGCTGCCGGTGTCATCGGTCAAATTGAGGATCCG
TTAATGACGCCGCGGCACAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 322; Mature: 321

Protein sequence:

>322_residues
MSMTRLIEDIKQVWRGEQQPSLVWSCSFAAACLLIATAIRYGLAHLRPDVFFTPYMPAVFFATAMGGSGVGLATAILGAG
LGLALDFNHGPVDGARLALMAMYLVVAGLVIWGVNHYRGLAAKQREIARRLIEEEQYRKLLVDELHHRLKNKTSTIHAVL
HQVLHDQPQVWGRIDQRIRALATADDLIARADGQGCDLKDLLMSELGPYGHVRFELNGDSLFLPAKLAVSLALIFHELAT
NAGKYGAFASPRGFLQVSWTMQDDRLKLTWDEAEGPALGEIGKPGFGTKLLKAALSSFDGRTETTYLATGIHCTMQCRVP
PS

Sequences:

>Translated_322_residues
MSMTRLIEDIKQVWRGEQQPSLVWSCSFAAACLLIATAIRYGLAHLRPDVFFTPYMPAVFFATAMGGSGVGLATAILGAG
LGLALDFNHGPVDGARLALMAMYLVVAGLVIWGVNHYRGLAAKQREIARRLIEEEQYRKLLVDELHHRLKNKTSTIHAVL
HQVLHDQPQVWGRIDQRIRALATADDLIARADGQGCDLKDLLMSELGPYGHVRFELNGDSLFLPAKLAVSLALIFHELAT
NAGKYGAFASPRGFLQVSWTMQDDRLKLTWDEAEGPALGEIGKPGFGTKLLKAALSSFDGRTETTYLATGIHCTMQCRVP
PS
>Mature_321_residues
SMTRLIEDIKQVWRGEQQPSLVWSCSFAAACLLIATAIRYGLAHLRPDVFFTPYMPAVFFATAMGGSGVGLATAILGAGL
GLALDFNHGPVDGARLALMAMYLVVAGLVIWGVNHYRGLAAKQREIARRLIEEEQYRKLLVDELHHRLKNKTSTIHAVLH
QVLHDQPQVWGRIDQRIRALATADDLIARADGQGCDLKDLLMSELGPYGHVRFELNGDSLFLPAKLAVSLALIFHELATN
AGKYGAFASPRGFLQVSWTMQDDRLKLTWDEAEGPALGEIGKPGFGTKLLKAALSSFDGRTETTYLATGIHCTMQCRVPP
S

Specific function: Photosensitive kinase that is involved in increased bacterial virulence upon exposure to light. Once ejected from an infected animal host, sunlight acts as an environmental signal that increases the virulence of the bacterium, preparing it for infection o

COG id: COG3920

COG function: function code T; Signal transduction histidine kinase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 PAS (PER-ARNT-SIM) domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001610
- InterPro:   IPR000014
- InterPro:   IPR000700
- InterPro:   IPR013767
- InterPro:   IPR013655
- InterPro:   IPR011102 [H]

Pfam domain/function: PF07536 HWE_HK; PF00989 PAS; PF08447 PAS_3 [H]

EC number: =2.7.13.3 [H]

Molecular weight: Translated: 35295; Mature: 35164

Theoretical pI: Translated: 7.96; Mature: 7.96

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSMTRLIEDIKQVWRGEQQPSLVWSCSFAAACLLIATAIRYGLAHLRPDVFFTPYMPAVF
CCHHHHHHHHHHHHCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHCCCCEECCCHHHHH
FATAMGGSGVGLATAILGAGLGLALDFNHGPVDGARLALMAMYLVVAGLVIWGVNHYRGL
HHHHCCCCCHHHHHHHHHCCCCEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
AAKQREIARRLIEEEQYRKLLVDELHHRLKNKTSTIHAVLHQVLHDQPQVWGRIDQRIRA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCHHHHHHHHHHHHH
LATADDLIARADGQGCDLKDLLMSELGPYGHVRFELNGDSLFLPAKLAVSLALIFHELAT
HHHHHHHHHHCCCCCCCHHHHHHHHCCCCCEEEEEECCCEEEEHHHHHHHHHHHHHHHHH
NAGKYGAFASPRGFLQVSWTMQDDRLKLTWDEAEGPALGEIGKPGFGTKLLKAALSSFDG
CCCCCCCCCCCCCCEEEEEEEECCEEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHCCC
RTETTYLATGIHCTMQCRVPPS
CCCEEEEEECEEEEEEECCCCC
>Mature Secondary Structure 
SMTRLIEDIKQVWRGEQQPSLVWSCSFAAACLLIATAIRYGLAHLRPDVFFTPYMPAVF
CHHHHHHHHHHHHCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHCCCCEECCCHHHHH
FATAMGGSGVGLATAILGAGLGLALDFNHGPVDGARLALMAMYLVVAGLVIWGVNHYRGL
HHHHCCCCCHHHHHHHHHCCCCEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
AAKQREIARRLIEEEQYRKLLVDELHHRLKNKTSTIHAVLHQVLHDQPQVWGRIDQRIRA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCHHHHHHHHHHHHH
LATADDLIARADGQGCDLKDLLMSELGPYGHVRFELNGDSLFLPAKLAVSLALIFHELAT
HHHHHHHHHHCCCCCCCHHHHHHHHCCCCCEEEEEECCCEEEEHHHHHHHHHHHHHHHHH
NAGKYGAFASPRGFLQVSWTMQDDRLKLTWDEAEGPALGEIGKPGFGTKLLKAALSSFDG
CCCCCCCCCCCCCCEEEEEEEECCEEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHCCC
RTETTYLATGIHCTMQCRVPPS
CCCEEEEEECEEEEEEECCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA