| Definition | Bradyrhizobium sp. ORS278 chromosome, complete genome. |
|---|---|
| Accession | NC_009445 |
| Length | 7,456,587 |
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The map label for this gene is iorB [H]
Identifier: 146337594
GI number: 146337594
Start: 460829
End: 463066
Strand: Direct
Name: iorB [H]
Synonym: BRADO0450
Alternate gene names: 146337594
Gene position: 460829-463066 (Clockwise)
Preceding gene: 146337593
Following gene: 146337597
Centisome position: 6.18
GC content: 69.26
Gene sequence:
>2238_bases ATGAACGCGCTTCTCAAGACCGACCTCGCAAATGCGCTGCCGCTGCTGCGGCCGCAGGGCATCACCAATCTGTCGCGCCG CCGCCTGCTCGGGCTCGGCGCCGGCGCGCTCGTCCTCGGCGCGCTGCTGCCAGCCGCCGGCGCGCGCGCCGCCACGGCTG CAGCGGTCAAGCCCGGCACCCGCGTGCCGGCGTTCCTGGTGATCGGCAAGGACAACTCGGTCAAGCTGCTCAGCCCGTTC GTCGAAGGCGGGCAGGGCATCAACACCGGCCTGGCGCAGATCGTCGGCGAGGAGCTCGATGTTCATCTGAACCGCTTCGA GGTCGAATGCGCGCCGCCCGGCGCCGACTACGCCATCATCAACGGCCTGCGCCTGACCGGCGGCAGCTTCTCGACGCGGT CGAGCTATGAGGTGATGCGCCGGCTCGGCGCCAGCGCGCGCGAGATGCTGATCCGCGTTGCCGCGGCCAAGCTCGACGTA ACGCCGGAGACCTTGACGACCGAGGACGGGCAAGTCGTGCACGCCGCGTCGAACCGGCGCGTGCCCTATGGCGAGCTCGC CGAGCAGGCGCTCGCGCTGACGCCGGCGGACACCGTCGCGCTGCGCGATCCCGCGACCTTCCGCTACATCCGCCAGCCGA TGCCGCGGCTCGATGTCCGCGCCAAATCGACCGGCAAGGCGGTCTATGCGATCGACCAGAAGATCGAGGGCATGCTGTAT GCCGCGATCCAGCATGCGCCGGTGCTCGGCACCGAGCCGGAGCGCATGGTCAACGAGGCGACCGTCAAGGCGATGCCCGG CGTGCATGCGGTCCACAAGCTGCCGGGCGCCGTCGCCGTGACCGCCGACAGCTGGTATCGCGCGCGCAAGGCGGTGGAGA CGCTGGACGTGGCGTGGTCGAAGGCGCCGGCAAGCGGCTTCGATGCAGTGGCGGCCGACTATTCCTCGGCCAACCTGCTC GCCGCACTGAAGGCCTCCGACGCCAATGGCGTGTCCGCCGAGAAGGCGGGCGACGTCGCCGCGGCCTTTGCCAGCGCCGC GACGATCGTCGAGGCCGAGTATGACGCGCCCTACCTGGCGCATGGCCAGCTCGAGCCGCCGTCCTCGATGGCGCGCTTCA ATGCCGACGGCACGCTCGAGCTGTGGGTGCCCAACCAGATGCCGGAGCTGTTCCAGGGCATCGCGGCCAAGGTTGGCGGC GTCACGCCCGACAGGGTGATCCTGCATTCGCCGATGCTCGGCGGCTTCTTCGGCCGCCACTTCGCCTATGGCTCGTCCAA TCCGTTCCAGCAGGCGATCCTGCTCGCGAAGGCGACGCAGCGGCCGGTCAAGGTGCTGTGGTCGCGCGAGGAGGAGTTCA AGATGGACGCGCTGCGCCCCCTGAGCTTCAGCCGCTTCAAGGCGGCGCTCGACAAGGACGGCAAGCCCGCCGCGATCCAG GTGCGCACCGTCGGCGAGGGGCCGATGGGCCGCTGGTTCGGCGTCACCGCCGGCGGCAAGGTCGACAGCTCCGCGGTCGA GGGCATCGTCGAGAAGCCCTATGCGATCGCCAACCGCAGCATGGAGTATGCGCGGTTCGCGCATCCCGTGACCATCGCGT TCTGGCGCTCGGTCGGCCACTCCATGAACGACTATTTCTACGAGGGCTTCCTCGACGAGCTCGCCGATGCCGGCAAGCAG GATCCCTATCAGCTGCGCCTCGCGCTTTTGCAGGACAGACCGCGCCATTTCAAGCTGCTGGAGACGGTGGCCAAGATGTC CGGCGGCTGGAGGCGCGGGCCTTATGACGCCGACGGCGGCAAGCGCGCCCGCGGTGTCGCGCTGGCCTCGCCGTTCGGTT CGGAGACCGCGACGATCGCCGAGGTCTCGCTGGAGAAAAGCGAGGTGCGCGTCCACCAGTTATGGATCGCGTTCGATCCC GGCAGCATCGTCAATCCGGCGATCGTCAAGTCGCAGGTGGAATCGGCGGCCGCGCTCGGTCTGTCTGCGGCACTGTTCGA GGAGCTCGTCTACAAGGACGGCCAGCGGCAGTCCCACAATTTCGACGACTATCCGATCCTGTCGCGCGCTTCGATGCCGA AGGTCGATGTCGAGATCGTCGAGAGCGGCGCGCCGATGGGCGGCGTCGGCGAGCCCGGCCTGCCCGGTATCGCTCCGGCC GTCGTCAACGCGGTCGCCGCGCTGACCGGGCGGCATGTGCGCAGCCTGCCGCTGGCGAAGGCGAAGCTCGGCGTCTGA
Upstream 100 bases:
>100_bases CGACATCGCCGACGCGATGACCAATCTCTGCCGTTGCGGCACCTACAACCGCATCGCCGCGGCGATCCGCCGCGCGGCGC AGGCCTGAGGAGACCGGCTC
Downstream 100 bases:
>100_bases GACGAGAGCATCCCGGCACAAGCCTGCCGGGATGCCGCTCGATTACTTGCTGAGAAACCTGTCGACCTCGGCGGCGAAGT CGTCGATCTCCTGGAACAGG
Product: putative isoquinoline 1-oxidoreductase subunit beta (iorB-like)
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 745; Mature: 745
Protein sequence:
>745_residues MNALLKTDLANALPLLRPQGITNLSRRRLLGLGAGALVLGALLPAAGARAATAAAVKPGTRVPAFLVIGKDNSVKLLSPF VEGGQGINTGLAQIVGEELDVHLNRFEVECAPPGADYAIINGLRLTGGSFSTRSSYEVMRRLGASAREMLIRVAAAKLDV TPETLTTEDGQVVHAASNRRVPYGELAEQALALTPADTVALRDPATFRYIRQPMPRLDVRAKSTGKAVYAIDQKIEGMLY AAIQHAPVLGTEPERMVNEATVKAMPGVHAVHKLPGAVAVTADSWYRARKAVETLDVAWSKAPASGFDAVAADYSSANLL AALKASDANGVSAEKAGDVAAAFASAATIVEAEYDAPYLAHGQLEPPSSMARFNADGTLELWVPNQMPELFQGIAAKVGG VTPDRVILHSPMLGGFFGRHFAYGSSNPFQQAILLAKATQRPVKVLWSREEEFKMDALRPLSFSRFKAALDKDGKPAAIQ VRTVGEGPMGRWFGVTAGGKVDSSAVEGIVEKPYAIANRSMEYARFAHPVTIAFWRSVGHSMNDYFYEGFLDELADAGKQ DPYQLRLALLQDRPRHFKLLETVAKMSGGWRRGPYDADGGKRARGVALASPFGSETATIAEVSLEKSEVRVHQLWIAFDP GSIVNPAIVKSQVESAAALGLSAALFEELVYKDGQRQSHNFDDYPILSRASMPKVDVEIVESGAPMGGVGEPGLPGIAPA VVNAVAALTGRHVRSLPLAKAKLGV
Sequences:
>Translated_745_residues MNALLKTDLANALPLLRPQGITNLSRRRLLGLGAGALVLGALLPAAGARAATAAAVKPGTRVPAFLVIGKDNSVKLLSPF VEGGQGINTGLAQIVGEELDVHLNRFEVECAPPGADYAIINGLRLTGGSFSTRSSYEVMRRLGASAREMLIRVAAAKLDV TPETLTTEDGQVVHAASNRRVPYGELAEQALALTPADTVALRDPATFRYIRQPMPRLDVRAKSTGKAVYAIDQKIEGMLY AAIQHAPVLGTEPERMVNEATVKAMPGVHAVHKLPGAVAVTADSWYRARKAVETLDVAWSKAPASGFDAVAADYSSANLL AALKASDANGVSAEKAGDVAAAFASAATIVEAEYDAPYLAHGQLEPPSSMARFNADGTLELWVPNQMPELFQGIAAKVGG VTPDRVILHSPMLGGFFGRHFAYGSSNPFQQAILLAKATQRPVKVLWSREEEFKMDALRPLSFSRFKAALDKDGKPAAIQ VRTVGEGPMGRWFGVTAGGKVDSSAVEGIVEKPYAIANRSMEYARFAHPVTIAFWRSVGHSMNDYFYEGFLDELADAGKQ DPYQLRLALLQDRPRHFKLLETVAKMSGGWRRGPYDADGGKRARGVALASPFGSETATIAEVSLEKSEVRVHQLWIAFDP GSIVNPAIVKSQVESAAALGLSAALFEELVYKDGQRQSHNFDDYPILSRASMPKVDVEIVESGAPMGGVGEPGLPGIAPA VVNAVAALTGRHVRSLPLAKAKLGV >Mature_745_residues MNALLKTDLANALPLLRPQGITNLSRRRLLGLGAGALVLGALLPAAGARAATAAAVKPGTRVPAFLVIGKDNSVKLLSPF VEGGQGINTGLAQIVGEELDVHLNRFEVECAPPGADYAIINGLRLTGGSFSTRSSYEVMRRLGASAREMLIRVAAAKLDV TPETLTTEDGQVVHAASNRRVPYGELAEQALALTPADTVALRDPATFRYIRQPMPRLDVRAKSTGKAVYAIDQKIEGMLY AAIQHAPVLGTEPERMVNEATVKAMPGVHAVHKLPGAVAVTADSWYRARKAVETLDVAWSKAPASGFDAVAADYSSANLL AALKASDANGVSAEKAGDVAAAFASAATIVEAEYDAPYLAHGQLEPPSSMARFNADGTLELWVPNQMPELFQGIAAKVGG VTPDRVILHSPMLGGFFGRHFAYGSSNPFQQAILLAKATQRPVKVLWSREEEFKMDALRPLSFSRFKAALDKDGKPAAIQ VRTVGEGPMGRWFGVTAGGKVDSSAVEGIVEKPYAIANRSMEYARFAHPVTIAFWRSVGHSMNDYFYEGFLDELADAGKQ DPYQLRLALLQDRPRHFKLLETVAKMSGGWRRGPYDADGGKRARGVALASPFGSETATIAEVSLEKSEVRVHQLWIAFDP GSIVNPAIVKSQVESAAALGLSAALFEELVYKDGQRQSHNFDDYPILSRASMPKVDVEIVESGAPMGGVGEPGLPGIAPA VVNAVAALTGRHVRSLPLAKAKLGV
Specific function: Specific towards N-containing N-heterocyclic substrates, including isoquinoline, isoquinolin-5-ol, phthalazine and quinazoline [H]
COG id: COG1529
COG function: function code C; Aerobic-type carbon monoxide dehydrogenase, large subunit CoxL/CutL homologs
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI1786478, Length=124, Percent_Identity=37.0967741935484, Blast_Score=72, Evalue=2e-13, Organism=Escherichia coli, GI1789230, Length=129, Percent_Identity=29.4573643410853, Blast_Score=63, Evalue=7e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000674 - InterPro: IPR008274 - InterPro: IPR012368 - InterPro: IPR006311 [H]
Pfam domain/function: PF02738 Ald_Xan_dh_C2 [H]
EC number: =1.3.99.16 [H]
Molecular weight: Translated: 79320; Mature: 79320
Theoretical pI: Translated: 8.93; Mature: 8.93
Prosite motif: PS00107 PROTEIN_KINASE_ATP
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.1 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.1 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNALLKTDLANALPLLRPQGITNLSRRRLLGLGAGALVLGALLPAAGARAATAAAVKPGT CCCHHHHHHHHHCCCCCCCCCCHHHHHHHHHCCHHHHHHHHHHHCCCCCHHHHHHCCCCC RVPAFLVIGKDNSVKLLSPFVEGGQGINTGLAQIVGEELDVHLNRFEVECAPPGADYAII CCCEEEEEECCCCCEEEHHHHCCCCCCHHHHHHHHHHHHCEEEEEEEEEECCCCCCEEEE NGLRLTGGSFSTRSSYEVMRRLGASAREMLIRVAAAKLDVTPETLTTEDGQVVHAASNRR ECEEECCCCCCCCHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEECCCCC VPYGELAEQALALTPADTVALRDPATFRYIRQPMPRLDVRAKSTGKAVYAIDQKIEGMLY CCHHHHHHHHHCCCCCCCEEECCCHHHHHHHCCCCCCCCEECCCCCEEEEECHHHHHHHH AAIQHAPVLGTEPERMVNEATVKAMPGVHAVHKLPGAVAVTADSWYRARKAVETLDVAWS HHHHCCCCCCCCHHHHHHHHHHHHCCCHHHHHHCCCCEEEECHHHHHHHHHHHHHHHHHC KAPASGFDAVAADYSSANLLAALKASDANGVSAEKAGDVAAAFASAATIVEAEYDAPYLA CCCCCCCHHHHHCCCCCCEEEEEECCCCCCCCHHHHCHHHHHHHHHHHEEEECCCCCEEE HGQLEPPSSMARFNADGTLELWVPNQMPELFQGIAAKVGGVTPDRVILHSPMLGGFFGRH CCCCCCCHHHHHCCCCCEEEEECCCCCHHHHHHHHHHHCCCCCCCEEEECCCHHHHHHHH FAYGSSNPFQQAILLAKATQRPVKVLWSREEEFKMDALRPLSFSRFKAALDKDGKPAAIQ HCCCCCCHHHHHHHHHHHCCCHHHHHHCCCHHHHHHHCCCCCHHHHHHHHCCCCCCCEEE VRTVGEGPMGRWFGVTAGGKVDSSAVEGIVEKPYAIANRSMEYARFAHPVTIAFWRSVGH EEECCCCCCCCEEEECCCCCCCHHHHHHHHHCCHHHHCCCHHHHHHCCCHHHHHHHHHCC SMNDYFYEGFLDELADAGKQDPYQLRLALLQDRPRHFKLLETVAKMSGGWRRGPYDADGG CHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCCCCCCC KRARGVALASPFGSETATIAEVSLEKSEVRVHQLWIAFDPGSIVNPAIVKSQVESAAALG CCCCCEEEECCCCCCCEEEEEEHHHHHHEEEEEEEEEECCCCCCCHHHHHHHHHHHHHHH LSAALFEELVYKDGQRQSHNFDDYPILSRASMPKVDVEIVESGAPMGGVGEPGLPGIAPA HHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCHHHH VVNAVAALTGRHVRSLPLAKAKLGV HHHHHHHHHCCHHHCCCCCHHHCCC >Mature Secondary Structure MNALLKTDLANALPLLRPQGITNLSRRRLLGLGAGALVLGALLPAAGARAATAAAVKPGT CCCHHHHHHHHHCCCCCCCCCCHHHHHHHHHCCHHHHHHHHHHHCCCCCHHHHHHCCCCC RVPAFLVIGKDNSVKLLSPFVEGGQGINTGLAQIVGEELDVHLNRFEVECAPPGADYAII CCCEEEEEECCCCCEEEHHHHCCCCCCHHHHHHHHHHHHCEEEEEEEEEECCCCCCEEEE NGLRLTGGSFSTRSSYEVMRRLGASAREMLIRVAAAKLDVTPETLTTEDGQVVHAASNRR ECEEECCCCCCCCHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEECCCCC VPYGELAEQALALTPADTVALRDPATFRYIRQPMPRLDVRAKSTGKAVYAIDQKIEGMLY CCHHHHHHHHHCCCCCCCEEECCCHHHHHHHCCCCCCCCEECCCCCEEEEECHHHHHHHH AAIQHAPVLGTEPERMVNEATVKAMPGVHAVHKLPGAVAVTADSWYRARKAVETLDVAWS HHHHCCCCCCCCHHHHHHHHHHHHCCCHHHHHHCCCCEEEECHHHHHHHHHHHHHHHHHC KAPASGFDAVAADYSSANLLAALKASDANGVSAEKAGDVAAAFASAATIVEAEYDAPYLA CCCCCCCHHHHHCCCCCCEEEEEECCCCCCCCHHHHCHHHHHHHHHHHEEEECCCCCEEE HGQLEPPSSMARFNADGTLELWVPNQMPELFQGIAAKVGGVTPDRVILHSPMLGGFFGRH CCCCCCCHHHHHCCCCCEEEEECCCCCHHHHHHHHHHHCCCCCCCEEEECCCHHHHHHHH FAYGSSNPFQQAILLAKATQRPVKVLWSREEEFKMDALRPLSFSRFKAALDKDGKPAAIQ HCCCCCCHHHHHHHHHHHCCCHHHHHHCCCHHHHHHHCCCCCHHHHHHHHCCCCCCCEEE VRTVGEGPMGRWFGVTAGGKVDSSAVEGIVEKPYAIANRSMEYARFAHPVTIAFWRSVGH EEECCCCCCCCEEEECCCCCCCHHHHHHHHHCCHHHHCCCHHHHHHCCCHHHHHHHHHCC SMNDYFYEGFLDELADAGKQDPYQLRLALLQDRPRHFKLLETVAKMSGGWRRGPYDADGG CHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCCCCCCC KRARGVALASPFGSETATIAEVSLEKSEVRVHQLWIAFDPGSIVNPAIVKSQVESAAALG CCCCCEEEECCCCCCCEEEEEEHHHHHHEEEEEEEEEECCCCCCCHHHHHHHHHHHHHHH LSAALFEELVYKDGQRQSHNFDDYPILSRASMPKVDVEIVESGAPMGGVGEPGLPGIAPA HHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCHHHH VVNAVAALTGRHVRSLPLAKAKLGV HHHHHHHHHCCHHHCCCCCHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 7782304; 8157655 [H]