| Definition | Bradyrhizobium sp. ORS278 chromosome, complete genome. |
|---|---|
| Accession | NC_009445 |
| Length | 7,456,587 |
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The map label for this gene is yleA [C]
Identifier: 146337530
GI number: 146337530
Start: 389250
End: 390581
Strand: Direct
Name: yleA [C]
Synonym: BRADO0384
Alternate gene names: 146337530
Gene position: 389250-390581 (Clockwise)
Preceding gene: 146337529
Following gene: 146337532
Centisome position: 5.22
GC content: 67.12
Gene sequence:
>1332_bases ATGAGCGTCGATGTCGTCACCTTCGGCTGCCGGCTCAACGCGTTCGAGTCCGAGCTGATCGCGCGCCATGTCGAGGCAGC GGGGGCGGACGACACCATCGTCATCAACAGCTGCGCTGTCACCAACGAGGCCGTGGCGCAGGCGCGGCAATCGATCCGCA AATTGAAGCGCGAGCGCCCTTACGCGCGCATCGTCGTGACTGGTTGCGCGGCGCAGACGCAGGCCGACATGTTCGCTGCG ATGCCTGAAGTCGATCGCGTGATCGGCAATGACGACAAGCTGCGGCCGGACGCCTGGCGCGCGACTACGCAGGTGCTGGC TGCGCCCCGCTTCGGCATCGATGCGACCGAAAAGGTCGCCGTCTCCGACATCATGGCCGTCACCGAGATGGCGCCGCATC TGGTCGACGGCTTCCAGCGCGGCCTGCCGCGGGTGTTCGTCCAGGTGCAGAACGGCTGCGACCATCGCTGCACCTTCTGC ATCATCCCCTACGGCCGCGGCAATTCACGCTCGGTGCCGATGGGGGCGGTGGTCGATCAGGTGCGAACGCTGGCTGAGCG CGGCCATGCTGAGATCGTGCTGACCGGCGTCGATCTCACCAGCTACGGCGCCGACCTGCCCGGCACGCCGAAGCTCGGCC TGCTGGTGAAACAGATCCTGCGCCACGTGCCGGAGCTGAAACGGTTGCGCATCTCCTCGATCGATTCGATCGAGGCCGAT GCCGACCTGCTCGATGCGCTCGCCGACGATGCCCGGCTGATGCCGCACCTGCATCTGTCATTGCAGGCCGGCGACGACCT GATCCTGAAGCGTATGAAGCGGCGGCATGTGCGCGCGGACGCGATCGCGTTCTGCGACCAGGTGCGTCGGCTGCGGCCGG ACATCGCGCTCGGCGCTGATCTGATCGCAGGCTTTCCAACCGAGACGGAGGAGATGTTTACGCGCTCGCTCGACCTCGTC GAGGCATGCGGCCTGACGCTCCTGCACGTCTTTCCCTATTCGCCGCGCCCGGGCACGCCGGCCGCGCGCATGCCGCAGGT GGATGGCGCCGTCATCCGTGATCGCGCGCGTCGGCTGCGCGCAGTGGGGGAGGCTGCGTTGCGGCGGCGGCTGGATGCCG AGATCGGCTGCGCGCGTGAAGTTCTTATCGAGAGTGCGACGCAGGGCAGGACGGAGCATTATCTGCCGGTGTCAGTCACG GGTGCCGAGCCGGGCTCAGTGCAGCGGCTGGTGATCGCCGGCCATGATGGCGGAAAACTGTCAGCCCCACCCTCGGTGTC ATCGCCCGGCTTGACCGGGCGATCCAGTACGCCGCGGCCTCTTGGTCAATAA
Upstream 100 bases:
>100_bases CGATCGAGTGGCGCGAGCGCGACGACCACGTGTTGATGACGGGCACCGCGACGTTCGAGTTCGAGGGCCGGTTTGAGCCA GCGCTGTTCGCCAGCGTCGC
Downstream 100 bases:
>100_bases TAACCGCCTCTGGAATACTGGATCGCCCGGTCGAGCCGGGCGATGACAGCTGTGGTGTGGGCGAGAGTGCAGGGTCTCAC TTGCGTCCGAGACGCTTCAC
Product: putative MiaB-like tRNA modifying enzyme
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 443; Mature: 442
Protein sequence:
>443_residues MSVDVVTFGCRLNAFESELIARHVEAAGADDTIVINSCAVTNEAVAQARQSIRKLKRERPYARIVVTGCAAQTQADMFAA MPEVDRVIGNDDKLRPDAWRATTQVLAAPRFGIDATEKVAVSDIMAVTEMAPHLVDGFQRGLPRVFVQVQNGCDHRCTFC IIPYGRGNSRSVPMGAVVDQVRTLAERGHAEIVLTGVDLTSYGADLPGTPKLGLLVKQILRHVPELKRLRISSIDSIEAD ADLLDALADDARLMPHLHLSLQAGDDLILKRMKRRHVRADAIAFCDQVRRLRPDIALGADLIAGFPTETEEMFTRSLDLV EACGLTLLHVFPYSPRPGTPAARMPQVDGAVIRDRARRLRAVGEAALRRRLDAEIGCAREVLIESATQGRTEHYLPVSVT GAEPGSVQRLVIAGHDGGKLSAPPSVSSPGLTGRSSTPRPLGQ
Sequences:
>Translated_443_residues MSVDVVTFGCRLNAFESELIARHVEAAGADDTIVINSCAVTNEAVAQARQSIRKLKRERPYARIVVTGCAAQTQADMFAA MPEVDRVIGNDDKLRPDAWRATTQVLAAPRFGIDATEKVAVSDIMAVTEMAPHLVDGFQRGLPRVFVQVQNGCDHRCTFC IIPYGRGNSRSVPMGAVVDQVRTLAERGHAEIVLTGVDLTSYGADLPGTPKLGLLVKQILRHVPELKRLRISSIDSIEAD ADLLDALADDARLMPHLHLSLQAGDDLILKRMKRRHVRADAIAFCDQVRRLRPDIALGADLIAGFPTETEEMFTRSLDLV EACGLTLLHVFPYSPRPGTPAARMPQVDGAVIRDRARRLRAVGEAALRRRLDAEIGCAREVLIESATQGRTEHYLPVSVT GAEPGSVQRLVIAGHDGGKLSAPPSVSSPGLTGRSSTPRPLGQ >Mature_442_residues SVDVVTFGCRLNAFESELIARHVEAAGADDTIVINSCAVTNEAVAQARQSIRKLKRERPYARIVVTGCAAQTQADMFAAM PEVDRVIGNDDKLRPDAWRATTQVLAAPRFGIDATEKVAVSDIMAVTEMAPHLVDGFQRGLPRVFVQVQNGCDHRCTFCI IPYGRGNSRSVPMGAVVDQVRTLAERGHAEIVLTGVDLTSYGADLPGTPKLGLLVKQILRHVPELKRLRISSIDSIEADA DLLDALADDARLMPHLHLSLQAGDDLILKRMKRRHVRADAIAFCDQVRRLRPDIALGADLIAGFPTETEEMFTRSLDLVE ACGLTLLHVFPYSPRPGTPAARMPQVDGAVIRDRARRLRAVGEAALRRRLDAEIGCAREVLIESATQGRTEHYLPVSVTG AEPGSVQRLVIAGHDGGKLSAPPSVSSPGLTGRSSTPRPLGQ
Specific function: Unknown
COG id: COG0621
COG function: function code J; 2-methylthioadenine synthetase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 MTTase N-terminal domain [H]
Homologues:
Organism=Homo sapiens, GI93277076, Length=405, Percent_Identity=27.9012345679012, Blast_Score=146, Evalue=4e-35, Organism=Homo sapiens, GI28872782, Length=454, Percent_Identity=24.8898678414097, Blast_Score=128, Evalue=1e-29, Organism=Homo sapiens, GI28872784, Length=454, Percent_Identity=24.8898678414097, Blast_Score=127, Evalue=2e-29, Organism=Escherichia coli, GI1786882, Length=434, Percent_Identity=26.036866359447, Blast_Score=154, Evalue=1e-38, Organism=Escherichia coli, GI1787057, Length=403, Percent_Identity=27.7915632754342, Blast_Score=133, Evalue=2e-32, Organism=Caenorhabditis elegans, GI17553146, Length=473, Percent_Identity=25.5813953488372, Blast_Score=136, Evalue=2e-32, Organism=Caenorhabditis elegans, GI71996771, Length=248, Percent_Identity=29.8387096774194, Blast_Score=109, Evalue=3e-24, Organism=Drosophila melanogaster, GI21356207, Length=437, Percent_Identity=26.0869565217391, Blast_Score=152, Evalue=4e-37, Organism=Drosophila melanogaster, GI19922432, Length=385, Percent_Identity=27.5324675324675, Blast_Score=134, Evalue=1e-31,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR006638 - InterPro: IPR005839 - InterPro: IPR020612 - InterPro: IPR013848 - InterPro: IPR006467 - InterPro: IPR007197 [H]
Pfam domain/function: PF04055 Radical_SAM; PF00919 UPF0004 [H]
EC number: NA
Molecular weight: Translated: 47995; Mature: 47864
Theoretical pI: Translated: 7.77; Mature: 7.77
Prosite motif: PS01278 UPF0004
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.0 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 2.0 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSVDVVTFGCRLNAFESELIARHVEAAGADDTIVINSCAVTNEAVAQARQSIRKLKRERP CCCEEEEECCCCCHHHHHHHHHHHHHCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHCC YARIVVTGCAAQTQADMFAAMPEVDRVIGNDDKLRPDAWRATTQVLAAPRFGIDATEKVA CEEEEEECCCCHHHHHHHHHCCHHHHHHCCCCCCCCHHHHHHHHHHHCCCCCCCCHHHHH VSDIMAVTEMAPHLVDGFQRGLPRVFVQVQNGCDHRCTFCIIPYGRGNSRSVPMGAVVDQ HHHHHHHHHHHHHHHHHHHHCHHHEEHHHCCCCCCCEEEEEEECCCCCCCCCCHHHHHHH VRTLAERGHAEIVLTGVDLTSYGADLPGTPKLGLLVKQILRHVPELKRLRISSIDSIEAD HHHHHHCCCCEEEEEECCHHHCCCCCCCCCCHHHHHHHHHHHCCHHHHHHHCCCCCCCCH ADLLDALADDARLMPHLHLSLQAGDDLILKRMKRRHVRADAIAFCDQVRRLRPDIALGAD HHHHHHHHHHHHHCCEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCHH LIAGFPTETEEMFTRSLDLVEACGLTLLHVFPYSPRPGTPAARMPQVDGAVIRDRARRLR HHCCCCCCHHHHHHHHHHHHHHHCHHEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHH AVGEAALRRRLDAEIGCAREVLIESATQGRTEHYLPVSVTGAEPGSVQRLVIAGHDGGKL HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCCEEEEEEEECCCCCC SAPPSVSSPGLTGRSSTPRPLGQ CCCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure SVDVVTFGCRLNAFESELIARHVEAAGADDTIVINSCAVTNEAVAQARQSIRKLKRERP CCEEEEECCCCCHHHHHHHHHHHHHCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHCC YARIVVTGCAAQTQADMFAAMPEVDRVIGNDDKLRPDAWRATTQVLAAPRFGIDATEKVA CEEEEEECCCCHHHHHHHHHCCHHHHHHCCCCCCCCHHHHHHHHHHHCCCCCCCCHHHHH VSDIMAVTEMAPHLVDGFQRGLPRVFVQVQNGCDHRCTFCIIPYGRGNSRSVPMGAVVDQ HHHHHHHHHHHHHHHHHHHHCHHHEEHHHCCCCCCCEEEEEEECCCCCCCCCCHHHHHHH VRTLAERGHAEIVLTGVDLTSYGADLPGTPKLGLLVKQILRHVPELKRLRISSIDSIEAD HHHHHHCCCCEEEEEECCHHHCCCCCCCCCCHHHHHHHHHHHCCHHHHHHHCCCCCCCCH ADLLDALADDARLMPHLHLSLQAGDDLILKRMKRRHVRADAIAFCDQVRRLRPDIALGAD HHHHHHHHHHHHHCCEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCHH LIAGFPTETEEMFTRSLDLVEACGLTLLHVFPYSPRPGTPAARMPQVDGAVIRDRARRLR HHCCCCCCHHHHHHHHHHHHHHHCHHEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHH AVGEAALRRRLDAEIGCAREVLIESATQGRTEHYLPVSVTGAEPGSVQRLVIAGHDGGKL HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCCEEEEEEEECCCCCC SAPPSVSSPGLTGRSSTPRPLGQ CCCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9823893 [H]