| Definition | Bradyrhizobium sp. ORS278 chromosome, complete genome. |
|---|---|
| Accession | NC_009445 |
| Length | 7,456,587 |
Click here to switch to the map view.
The map label for this gene is 146337515
Identifier: 146337515
GI number: 146337515
Start: 375862
End: 376257
Strand: Reverse
Name: 146337515
Synonym: BRADO0366
Alternate gene names: NA
Gene position: 376257-375862 (Counterclockwise)
Preceding gene: 146337519
Following gene: 146337514
Centisome position: 5.05
GC content: 63.89
Gene sequence:
>396_bases TTGACAGAACTGAAGGCCCCCTCGCTCGCCGACATGGAAGCGATGGCGCATGATGTGTTCGAGCGGCTGCCCGCGCATTT CCGCAGGATGTGCGAGGGCGTCATCATCCGGGTCGACGACTTCCCTACCGAGGAGGTGCTCGACGAGATGCAGGCCGAGA GCGAGTTCGACCTGCTCGGCCTGTTCCAGGGCACCGGGCTGCCGTTCCGCAGCAATGACGACCTGCCGCGCCTGCCCAAC ATGATCTGGCTGTATCGCCGCCCAATCCTGGACTATTGGGCGGAGCATGACGAGAGCCTGGGCCACATCGTCCGCCACGT CCTGATCCACGAGATCGGGCATCATTTCGGGATGTCGGACGACGACATGGAAGCGATCGAGGCCGCCGCCGACTGA
Upstream 100 bases:
>100_bases CGGTCGCCGTTTTCGCATCTGGCGTCAATCGCAACGCCGCCACACTTGTCATAGAACCAGGGCGCGACATCAGCAAAGTG GGGGTGAGAAGGCGGCAATG
Downstream 100 bases:
>100_bases CCTGGACGGCTGGATTTTCGGGCAATTTGACTTTATCCGCCCCGCCAATCGGGCTAAACAGCGGCCTGCCCGATACTCTC GAAGGTGCCCCCGATGGACA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 131; Mature: 130
Protein sequence:
>131_residues MTELKAPSLADMEAMAHDVFERLPAHFRRMCEGVIIRVDDFPTEEVLDEMQAESEFDLLGLFQGTGLPFRSNDDLPRLPN MIWLYRRPILDYWAEHDESLGHIVRHVLIHEIGHHFGMSDDDMEAIEAAAD
Sequences:
>Translated_131_residues MTELKAPSLADMEAMAHDVFERLPAHFRRMCEGVIIRVDDFPTEEVLDEMQAESEFDLLGLFQGTGLPFRSNDDLPRLPN MIWLYRRPILDYWAEHDESLGHIVRHVLIHEIGHHFGMSDDDMEAIEAAAD >Mature_130_residues TELKAPSLADMEAMAHDVFERLPAHFRRMCEGVIIRVDDFPTEEVLDEMQAESEFDLLGLFQGTGLPFRSNDDLPRLPNM IWLYRRPILDYWAEHDESLGHIVRHVLIHEIGHHFGMSDDDMEAIEAAAD
Specific function: Unknown
COG id: COG3824
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15118; Mature: 14987
Theoretical pI: Translated: 4.27; Mature: 4.27
Prosite motif: PS00142 ZINC_PROTEASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 6.1 %Met (Translated Protein) 6.9 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 5.4 %Met (Mature Protein) 6.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTELKAPSLADMEAMAHDVFERLPAHFRRMCEGVIIRVDDFPTEEVLDEMQAESEFDLLG CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCCCHHHHHHHHHCCCCCHHHH LFQGTGLPFRSNDDLPRLPNMIWLYRRPILDYWAEHDESLGHIVRHVLIHEIGHHFGMSD HHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCC DDMEAIEAAAD CHHHHHHHHCC >Mature Secondary Structure TELKAPSLADMEAMAHDVFERLPAHFRRMCEGVIIRVDDFPTEEVLDEMQAESEFDLLG CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCCCHHHHHHHHHCCCCCHHHH LFQGTGLPFRSNDDLPRLPNMIWLYRRPILDYWAEHDESLGHIVRHVLIHEIGHHFGMSD HHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCC DDMEAIEAAAD CHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA