Definition | Bradyrhizobium sp. ORS278 chromosome, complete genome. |
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Accession | NC_009445 |
Length | 7,456,587 |
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The map label for this gene is asd [H]
Identifier: 146337507
GI number: 146337507
Start: 369716
End: 370750
Strand: Direct
Name: asd [H]
Synonym: BRADO0358
Alternate gene names: 146337507
Gene position: 369716-370750 (Clockwise)
Preceding gene: 146337504
Following gene: 146337508
Centisome position: 4.96
GC content: 62.51
Gene sequence:
>1035_bases ATGGGTTACAAAGTCGCAGTGGTCGGCGCGACCGGCAATGTCGGGCGGGAAATGCTCAACATTCTCGACGAGCGGAAGTT TCCCGCCGACGAGGTCGTGGCGCTCGCTTCACGCCGCAGCGTCGGCGTCGAGGTGTCCTATGGCGATCGCACGCTGAAGG TCAAAGCGCTCGAGCACTACGATTTTGCCGATGTCGATATCTGCCTGATGTCGGCGGGCGGCACGGTCTCGAAGGAATGG TCGCCGAAGATCGGCGCCGCAGGCGCCGTCGTCATCGACAACTCCTCGGCTTGGCGCATGGATCCGGACGTGCCGCTGAT CGTGCCGGAGGTGAACGCCGATGCGGCCGCAGGGTTCAACAAGAAGAACATCATCGCCAACCCGAACTGCTCGACCGCGC AGCTCGTCGTCGCGCTGAAGCCGCTGCACGACAAGGCGCATATCACGCGCGTCGTCGTTTCGACCTATCAGTCGGTGTCC GGCGCCGGCAAGGACGCGATGGACGAATTGTTCTCGCAGACCAAGGCCGTCTACACCAATGACGAGCTGGTCGCGAAGAA GTTCCCCAAGCGCATCGCCTTCAACGTCATCCCGCACATCGACGTCTTCATGGAAGACGGCTTCACCAAGGAAGAGTGGA AGATGATGGCGGAGACCAAGAAGATCCTGGATCCGAAGATCAAGCTGACCGCGACCTGCGTGCGTGTGCCGGTGTTCGTC GGCCATTCCGAAGCCGTCAATGTCGAGTTTGAGCAGCCGATCACGGCGGACGAGGCCCGCGAGATTCTGCGCCGCGCGCC GGGCTGCCTCGTCATCGACAAGCAGGAGCCGGGCGGCTACGCGACTCCTTATGAGGCCGCCGGCGAGGACGCGACCTATA TCAGCCGCATCCGCGAGGATGCCACGGTCGAGAACGGCCTCGCCTTCTGGTGCGTGTCGGACAATCTGCGCAAGGGCGCG GCGCTGAATGCGATCCAGATTGCGGAAGTGCTGATCAACCGCAAGCTGATCACCGCCAAGAAGAAGGCGGCGTAA
Upstream 100 bases:
>100_bases CGTGGTAACGTTGTGTCAGGGACGTTTCTCGCATAGAAGCGCTGCCGCTTCCGTTTCCGCTGAGATGAGCGGTCGGCCAT ATTTCTTCGGAGAGTGAACG
Downstream 100 bases:
>100_bases CGGACAACCGGTCCGCTCCCGCACATGGAGACCGAAGCCTTGCGTTCGAGTGTCTCAACGTCGTCATGGCTGGGCTGGTC CTCCACGTCGGTCGGCATGA
Product: aspartate-semialdehyde dehydrogenase
Products: NA
Alternate protein names: ASA dehydrogenase; ASADH [H]
Number of amino acids: Translated: 344; Mature: 343
Protein sequence:
>344_residues MGYKVAVVGATGNVGREMLNILDERKFPADEVVALASRRSVGVEVSYGDRTLKVKALEHYDFADVDICLMSAGGTVSKEW SPKIGAAGAVVIDNSSAWRMDPDVPLIVPEVNADAAAGFNKKNIIANPNCSTAQLVVALKPLHDKAHITRVVVSTYQSVS GAGKDAMDELFSQTKAVYTNDELVAKKFPKRIAFNVIPHIDVFMEDGFTKEEWKMMAETKKILDPKIKLTATCVRVPVFV GHSEAVNVEFEQPITADEAREILRRAPGCLVIDKQEPGGYATPYEAAGEDATYISRIREDATVENGLAFWCVSDNLRKGA ALNAIQIAEVLINRKLITAKKKAA
Sequences:
>Translated_344_residues MGYKVAVVGATGNVGREMLNILDERKFPADEVVALASRRSVGVEVSYGDRTLKVKALEHYDFADVDICLMSAGGTVSKEW SPKIGAAGAVVIDNSSAWRMDPDVPLIVPEVNADAAAGFNKKNIIANPNCSTAQLVVALKPLHDKAHITRVVVSTYQSVS GAGKDAMDELFSQTKAVYTNDELVAKKFPKRIAFNVIPHIDVFMEDGFTKEEWKMMAETKKILDPKIKLTATCVRVPVFV GHSEAVNVEFEQPITADEAREILRRAPGCLVIDKQEPGGYATPYEAAGEDATYISRIREDATVENGLAFWCVSDNLRKGA ALNAIQIAEVLINRKLITAKKKAA >Mature_343_residues GYKVAVVGATGNVGREMLNILDERKFPADEVVALASRRSVGVEVSYGDRTLKVKALEHYDFADVDICLMSAGGTVSKEWS PKIGAAGAVVIDNSSAWRMDPDVPLIVPEVNADAAAGFNKKNIIANPNCSTAQLVVALKPLHDKAHITRVVVSTYQSVSG AGKDAMDELFSQTKAVYTNDELVAKKFPKRIAFNVIPHIDVFMEDGFTKEEWKMMAETKKILDPKIKLTATCVRVPVFVG HSEAVNVEFEQPITADEAREILRRAPGCLVIDKQEPGGYATPYEAAGEDATYISRIREDATVENGLAFWCVSDNLRKGAA LNAIQIAEVLINRKLITAKKKAA
Specific function: Unknown
COG id: COG0136
COG function: function code E; Aspartate-semialdehyde dehydrogenase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the aspartate-semialdehyde dehydrogenase family [H]
Homologues:
Organism=Escherichia coli, GI1788658, Length=338, Percent_Identity=34.0236686390533, Blast_Score=207, Evalue=8e-55, Organism=Escherichia coli, GI1789841, Length=354, Percent_Identity=27.1186440677966, Blast_Score=104, Evalue=9e-24, Organism=Saccharomyces cerevisiae, GI6320362, Length=398, Percent_Identity=30.9045226130653, Blast_Score=91, Evalue=3e-19,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000319 - InterPro: IPR012080 - InterPro: IPR005986 - InterPro: IPR016040 - InterPro: IPR000534 - InterPro: IPR012280 [H]
Pfam domain/function: PF01118 Semialdhyde_dh; PF02774 Semialdhyde_dhC [H]
EC number: =1.2.1.11 [H]
Molecular weight: Translated: 37437; Mature: 37306
Theoretical pI: Translated: 6.38; Mature: 6.38
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGYKVAVVGATGNVGREMLNILDERKFPADEVVALASRRSVGVEVSYGDRTLKVKALEHY CCEEEEEEECCCHHHHHHHHHHHHCCCCHHHHHHHHHCCCCEEEEEECCEEEEEEEECCC DFADVDICLMSAGGTVSKEWSPKIGAAGAVVIDNSSAWRMDPDVPLIVPEVNADAAAGFN CCCCEEEEEEECCCCCCCCCCCCCCCCEEEEEECCCCEEECCCCCEEEECCCCHHHCCCC KKNIIANPNCSTAQLVVALKPLHDKAHITRVVVSTYQSVSGAGKDAMDELFSQTKAVYTN CCCEEECCCCCCEEEEEEEECCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCEEECC DELVAKKFPKRIAFNVIPHIDVFMEDGFTKEEWKMMAETKKILDPKIKLTATCVRVPVFV CHHHHHHCCHHHHHHCCCCEEEEECCCCCHHHHHHHHHHHHHCCCCEEEEEEEEEEEEEE GHSEAVNVEFEQPITADEAREILRRAPGCLVIDKQEPGGYATPYEAAGEDATYISRIRED CCCCEEEEEECCCCCHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHC ATVENGLAFWCVSDNLRKGAALNAIQIAEVLINRKLITAKKKAA CHHCCCEEEEEECCCCCCCCCCHHHHHHHHHHCCHHCCCCCCCC >Mature Secondary Structure GYKVAVVGATGNVGREMLNILDERKFPADEVVALASRRSVGVEVSYGDRTLKVKALEHY CEEEEEEECCCHHHHHHHHHHHHCCCCHHHHHHHHHCCCCEEEEEECCEEEEEEEECCC DFADVDICLMSAGGTVSKEWSPKIGAAGAVVIDNSSAWRMDPDVPLIVPEVNADAAAGFN CCCCEEEEEEECCCCCCCCCCCCCCCCEEEEEECCCCEEECCCCCEEEECCCCHHHCCCC KKNIIANPNCSTAQLVVALKPLHDKAHITRVVVSTYQSVSGAGKDAMDELFSQTKAVYTN CCCEEECCCCCCEEEEEEEECCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCEEECC DELVAKKFPKRIAFNVIPHIDVFMEDGFTKEEWKMMAETKKILDPKIKLTATCVRVPVFV CHHHHHHCCHHHHHHCCCCEEEEECCCCCHHHHHHHHHHHHHCCCCEEEEEEEEEEEEEE GHSEAVNVEFEQPITADEAREILRRAPGCLVIDKQEPGGYATPYEAAGEDATYISRIRED CCCCEEEEEECCCCCHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHC ATVENGLAFWCVSDNLRKGAALNAIQIAEVLINRKLITAKKKAA CHHCCCEEEEEECCCCCCCCCCHHHHHHHHHHCCHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9537320 [H]