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The map label for this gene is ynhG [H]

Identifier: 146337496

GI number: 146337496

Start: 356706

End: 357167

Strand: Reverse

Name: ynhG [H]

Synonym: BRADO0342

Alternate gene names: 146337496

Gene position: 357167-356706 (Counterclockwise)

Preceding gene: 146337497

Following gene: 146337494

Centisome position: 4.79

GC content: 65.37

Gene sequence:

>462_bases
GTGACGAGCAAGACGGCGTGCGCCCGCCCCGAGCTCGTCGGCATCGCCGGCGACTATTCGCCGGGAACCATCGTTGTGAA
GACCAGCGAGCGCAGGCTCTATCTCGTGCTCGATGGCAGCCACGCCATGCGCTACCCGGTCGGTGTCGGCAAGGCCGGAC
GGCAATGGGCCGGTACCACCAAGATCGACGGCAAATACAAGAATCCCGCTTGGGCGCCGCCTGCCGACGTCAAGCGCGAC
AAGCCTGAATTGCCGGACGTGATCGCCGGCGGCTCGCCACGCAATCCGATGGGCGTCGCGGCGATGACGCTCGCCGGCGG
CGAATATGCGATTCACGGCACCAACGTGCCGAACTCGGTCGGCGGCTATGTGTCCTATGGCTGCATCCGCATGCTCAACC
AGGACATCACCGATCTCTATGACCGCGTGTCGATCGGCACCACGGTCGTGGTGACGCGCTGA

Upstream 100 bases:

>100_bases
CGCCACGGAACTGGCTGAGGGATGGGCGATGCGCACTGGAACGGTTGGGCTGGCCTTGAAGGCAGCAATGGTGGCCGCTT
CGGTGGCCGGCTCCTTGGTT

Downstream 100 bases:

>100_bases
TCACGGCAACGATCACCTCAGCGGCGCTTCCGGAGGGTGCGGCGCGCCGTGATAGATCTCAGAAGTCCGAGATGATGCCC
TTGTTCTCCCAGTCGCCGTA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 153; Mature: 152

Protein sequence:

>153_residues
MTSKTACARPELVGIAGDYSPGTIVVKTSERRLYLVLDGSHAMRYPVGVGKAGRQWAGTTKIDGKYKNPAWAPPADVKRD
KPELPDVIAGGSPRNPMGVAAMTLAGGEYAIHGTNVPNSVGGYVSYGCIRMLNQDITDLYDRVSIGTTVVVTR

Sequences:

>Translated_153_residues
MTSKTACARPELVGIAGDYSPGTIVVKTSERRLYLVLDGSHAMRYPVGVGKAGRQWAGTTKIDGKYKNPAWAPPADVKRD
KPELPDVIAGGSPRNPMGVAAMTLAGGEYAIHGTNVPNSVGGYVSYGCIRMLNQDITDLYDRVSIGTTVVVTR
>Mature_152_residues
TSKTACARPELVGIAGDYSPGTIVVKTSERRLYLVLDGSHAMRYPVGVGKAGRQWAGTTKIDGKYKNPAWAPPADVKRDK
PELPDVIAGGSPRNPMGVAAMTLAGGEYAIHGTNVPNSVGGYVSYGCIRMLNQDITDLYDRVSIGTTVVVTR

Specific function: Responsible, at least in part, for generating a meso- diaminopimelyl-3-a meso-diaminopimelyl-3 cross-link [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Periplasm (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 LysM repeat [H]

Homologues:

Organism=Escherichia coli, GI1787968, Length=136, Percent_Identity=41.9117647058824, Blast_Score=88, Evalue=3e-19,
Organism=Escherichia coli, GI1788299, Length=137, Percent_Identity=39.4160583941606, Blast_Score=87, Evalue=5e-19,
Organism=Escherichia coli, GI1787040, Length=136, Percent_Identity=38.9705882352941, Blast_Score=86, Evalue=1e-18,
Organism=Escherichia coli, GI1787356, Length=136, Percent_Identity=38.9705882352941, Blast_Score=78, Evalue=2e-16,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR018392
- InterPro:   IPR002482
- InterPro:   IPR005490 [H]

Pfam domain/function: PF01476 LysM; PF03734 YkuD [H]

EC number: NA

Molecular weight: Translated: 16253; Mature: 16122

Theoretical pI: Translated: 9.56; Mature: 9.56

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
4.6 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTSKTACARPELVGIAGDYSPGTIVVKTSERRLYLVLDGSHAMRYPVGVGKAGRQWAGTT
CCCCCCCCCCCEEEEECCCCCCEEEEEECCCEEEEEEECCCEEECCCCCCCCCCCCCCCC
KIDGKYKNPAWAPPADVKRDKPELPDVIAGGSPRNPMGVAAMTLAGGEYAIHGTNVPNSV
EECCCCCCCCCCCCCCCCCCCCCCCCEECCCCCCCCCCEEEEEECCCEEEEECCCCCCCC
GGYVSYGCIRMLNQDITDLYDRVSIGTTVVVTR
CCHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEC
>Mature Secondary Structure 
TSKTACARPELVGIAGDYSPGTIVVKTSERRLYLVLDGSHAMRYPVGVGKAGRQWAGTT
CCCCCCCCCCEEEEECCCCCCEEEEEECCCEEEEEEECCCEEECCCCCCCCCCCCCCCC
KIDGKYKNPAWAPPADVKRDKPELPDVIAGGSPRNPMGVAAMTLAGGEYAIHGTNVPNSV
EECCCCCCCCCCCCCCCCCCCCCCCCEECCCCCCCCCCEEEEEECCCEEEEECCCCCCCC
GGYVSYGCIRMLNQDITDLYDRVSIGTTVVVTR
CCHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9278503; 9097039 [H]