Definition | Bradyrhizobium sp. ORS278 chromosome, complete genome. |
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Accession | NC_009445 |
Length | 7,456,587 |
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The map label for this gene is 146337461
Identifier: 146337461
GI number: 146337461
Start: 318296
End: 318709
Strand: Direct
Name: 146337461
Synonym: BRADO0304
Alternate gene names: NA
Gene position: 318296-318709 (Clockwise)
Preceding gene: 146337460
Following gene: 146337466
Centisome position: 4.27
GC content: 62.08
Gene sequence:
>414_bases ATGAGCTATTGGCTGGTGAAATCCGAACCCTCGGTCTGGTCCTGGGACCAGCAGGTGGAGAAGGGCGCCAAGGGCGAGGC GTGGACCGGCGTGCGCAACTACACGGCGCGGCAGAACCTCGTGGCGATGAAGCAAGGCGAGCTCGCCTTCTACTACCATT CCAACGAGGGCAAGGCGATCGTCGGCATCGCCGAGATCATCAAGGAAGCCTATCCCGACCCGACGGACAAGACCGAGAAA TTCGTCTGCGTCGACATCAAGGCGCACAAGGCCTTCAAGACCCCGGTGACGCTAGCCGCCATCAAGGCCGAGCCGAAGCT CGCAGAGATGGCGCTGGTGAAGCAGTCACGCCTGTCGGTACAGCCGGTGACTCCCGAGGAATGGAAGCTCGTCTGCAAGA TGGGCGGGGTGTAG
Upstream 100 bases:
>100_bases TAAACTGTTGACCCGGCGATTGCCGTCTTCTTTGATCCGCCCGCCGAGCAAGCCCGTCTTCCGCTCGGGACTGGCGCGAC GATCCGAGGACCTTGCACAT
Downstream 100 bases:
>100_bases GGGCCGCGCCGCCCGTCGCTCCCAATATCTCGGCGGAGGACATCAGATGCGTTGTTCTCCGGGCGCACGGCGCGAGCGCG AGATCCTTGACCACAGGGTT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 137; Mature: 136
Protein sequence:
>137_residues MSYWLVKSEPSVWSWDQQVEKGAKGEAWTGVRNYTARQNLVAMKQGELAFYYHSNEGKAIVGIAEIIKEAYPDPTDKTEK FVCVDIKAHKAFKTPVTLAAIKAEPKLAEMALVKQSRLSVQPVTPEEWKLVCKMGGV
Sequences:
>Translated_137_residues MSYWLVKSEPSVWSWDQQVEKGAKGEAWTGVRNYTARQNLVAMKQGELAFYYHSNEGKAIVGIAEIIKEAYPDPTDKTEK FVCVDIKAHKAFKTPVTLAAIKAEPKLAEMALVKQSRLSVQPVTPEEWKLVCKMGGV >Mature_136_residues SYWLVKSEPSVWSWDQQVEKGAKGEAWTGVRNYTARQNLVAMKQGELAFYYHSNEGKAIVGIAEIIKEAYPDPTDKTEKF VCVDIKAHKAFKTPVTLAAIKAEPKLAEMALVKQSRLSVQPVTPEEWKLVCKMGGV
Specific function: Unknown
COG id: COG2947
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Homo sapiens, GI83267861, Length=170, Percent_Identity=35.2941176470588, Blast_Score=86, Evalue=8e-18, Organism=Homo sapiens, GI40806221, Length=170, Percent_Identity=35.2941176470588, Blast_Score=86, Evalue=8e-18, Organism=Homo sapiens, GI7661804, Length=170, Percent_Identity=35.2941176470588, Blast_Score=86, Evalue=8e-18, Organism=Homo sapiens, GI83267859, Length=89, Percent_Identity=44.9438202247191, Blast_Score=69, Evalue=1e-12, Organism=Homo sapiens, GI40806219, Length=89, Percent_Identity=44.9438202247191, Blast_Score=69, Evalue=1e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15344; Mature: 15213
Theoretical pI: Translated: 9.06; Mature: 9.06
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSYWLVKSEPSVWSWDQQVEKGAKGEAWTGVRNYTARQNLVAMKQGELAFYYHSNEGKAI CCEEEEECCCCCCCCHHHHHCCCCCCCCCCCCCCCCCCCEEEEECCCEEEEEECCCCCEE VGIAEIIKEAYPDPTDKTEKFVCVDIKAHKAFKTPVTLAAIKAEPKLAEMALVKQSRLSV EEHHHHHHHHCCCCCCCCCEEEEEEEECCCCCCCCEEEEEEECCCCHHHHHHHHHHCCEE QPVTPEEWKLVCKMGGV CCCCCHHHEEEEECCCC >Mature Secondary Structure SYWLVKSEPSVWSWDQQVEKGAKGEAWTGVRNYTARQNLVAMKQGELAFYYHSNEGKAI CEEEEECCCCCCCCHHHHHCCCCCCCCCCCCCCCCCCCEEEEECCCEEEEEECCCCCEE VGIAEIIKEAYPDPTDKTEKFVCVDIKAHKAFKTPVTLAAIKAEPKLAEMALVKQSRLSV EEHHHHHHHHCCCCCCCCCEEEEEEEECCCCCCCCEEEEEEECCCCHHHHHHHHHHCCEE QPVTPEEWKLVCKMGGV CCCCCHHHEEEEECCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA