Definition Bradyrhizobium sp. ORS278 chromosome, complete genome.
Accession NC_009445
Length 7,456,587

Click here to switch to the map view.

The map label for this gene is yfeJ [H]

Identifier: 146337440

GI number: 146337440

Start: 292932

End: 293678

Strand: Reverse

Name: yfeJ [H]

Synonym: BRADO0280

Alternate gene names: 146337440

Gene position: 293678-292932 (Counterclockwise)

Preceding gene: 146337441

Following gene: 146337439

Centisome position: 3.94

GC content: 69.21

Gene sequence:

>747_bases
TTGTCCACGCCGGCTGCGGCAGCTGCGCCGCGGCGGCCCGTGCTCATCATCCTGCACCAGGAAACCTCGAGCCCCGGGCG
GATCGGCAACGCGCTGCGCGCGCGGGGCTACCGGCTGGACATCCGCCGGCCACGCTTCGGCGATCCGCTGCCGAAGACGC
TGGCCGAGCATTCGGGCGCCGTGATCTTCGGCGGGCCGATGAGCGCCAACGATCCCGACGATTTCGTCCGGCGCGAGATC
GACTGGATCGAGGTGCCGTTGCGCGAGCAGCGGCCGTTCCTCGGGATCTGCCTGGGGGCGCAGATGCTGGCGATCCAGCT
CGGCGCCAAGGTCGCACCGCATCCGCAAGGGCGTGCCGAGATCGGCTACTACCCGATCCGCCCGACGCGCGCCGGCAAGA
GGCTCTGCCCGCATTGGCCCGACAATGTCTATCACTGGCACCGCGAAGGTTTCGACCTGCCTTCCGGCGCCGACCTGCTC
GCCGAGGGCGTCGACTTCCCGGTCCAGGCCTATCAATACGGCAACGCCACCGGGCTGCAGTTCCACCCTGATGTGACCTA
CGCGATGATGTGCCGCTGGACCACGCGCGGTCATGCGCGGCTGGACACGCCGGGCGCCTGCCCGCGCCACCATCATTTTG
AAGGCCGCGCCGTGCATGATGCTGCGGAACGGGTTTGGCTGAAGCATTTCCTGGATGGATGGCTGGCCCGGCAGCCGGTC
GCGGCGATGGCCGAGGCAGCGGAGTAA

Upstream 100 bases:

>100_bases
CCCCCGTTAACCTTCGTTTAGCTATGATCGCCAGGTGATGCTCAGGCCAGACCCTTCGCTCGACTCGAACGGGACCGCCA
AGGCGGACGTTCGGCCCCTG

Downstream 100 bases:

>100_bases
AAGTCGCGTCTTCGGACAGTCGGTGGGTGGTTAACTCGATAACTCTGTGTCAGCCCGGCTTCGCCAAGTGGCTACGCCGG
GCACCACGCCTCGCCCTTGG

Product: glutamine amidotransferase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 248; Mature: 247

Protein sequence:

>248_residues
MSTPAAAAAPRRPVLIILHQETSSPGRIGNALRARGYRLDIRRPRFGDPLPKTLAEHSGAVIFGGPMSANDPDDFVRREI
DWIEVPLREQRPFLGICLGAQMLAIQLGAKVAPHPQGRAEIGYYPIRPTRAGKRLCPHWPDNVYHWHREGFDLPSGADLL
AEGVDFPVQAYQYGNATGLQFHPDVTYAMMCRWTTRGHARLDTPGACPRHHHFEGRAVHDAAERVWLKHFLDGWLARQPV
AAMAEAAE

Sequences:

>Translated_248_residues
MSTPAAAAAPRRPVLIILHQETSSPGRIGNALRARGYRLDIRRPRFGDPLPKTLAEHSGAVIFGGPMSANDPDDFVRREI
DWIEVPLREQRPFLGICLGAQMLAIQLGAKVAPHPQGRAEIGYYPIRPTRAGKRLCPHWPDNVYHWHREGFDLPSGADLL
AEGVDFPVQAYQYGNATGLQFHPDVTYAMMCRWTTRGHARLDTPGACPRHHHFEGRAVHDAAERVWLKHFLDGWLARQPV
AAMAEAAE
>Mature_247_residues
STPAAAAAPRRPVLIILHQETSSPGRIGNALRARGYRLDIRRPRFGDPLPKTLAEHSGAVIFGGPMSANDPDDFVRREID
WIEVPLREQRPFLGICLGAQMLAIQLGAKVAPHPQGRAEIGYYPIRPTRAGKRLCPHWPDNVYHWHREGFDLPSGADLLA
EGVDFPVQAYQYGNATGLQFHPDVTYAMMCRWTTRGHARLDTPGACPRHHHFEGRAVHDAAERVWLKHFLDGWLARQPVA
AMAEAAE

Specific function: Unknown

COG id: COG0518

COG function: function code F; GMP synthase - Glutamine amidotransferase domain

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 glutamine amidotransferase type-1 domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR017926
- InterPro:   IPR000991 [H]

Pfam domain/function: PF00117 GATase [H]

EC number: NA

Molecular weight: Translated: 27666; Mature: 27535

Theoretical pI: Translated: 8.64; Mature: 8.64

Prosite motif: PS00442 GATASE_TYPE_I

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSTPAAAAAPRRPVLIILHQETSSPGRIGNALRARGYRLDIRRPRFGDPLPKTLAEHSGA
CCCCCCCCCCCCCEEEEEECCCCCCCHHHHHHHHCCEEEEECCCCCCCCHHHHHHHHCCE
VIFGGPMSANDPDDFVRREIDWIEVPLREQRPFLGICLGAQMLAIQLGAKVAPHPQGRAE
EEECCCCCCCCHHHHHHHHCCCEECCHHHCCCEEEEHHHHHHHHHHHCCCCCCCCCCCCC
IGYYPIRPTRAGKRLCPHWPDNVYHWHREGFDLPSGADLLAEGVDFPVQAYQYGNATGLQ
CCEECCCCCCCCCCCCCCCCCCHHHHHHCCCCCCCCHHHHHHCCCCCCEEEECCCCCCCE
FHPDVTYAMMCRWTTRGHARLDTPGACPRHHHFEGRAVHDAAERVWLKHFLDGWLARQPV
ECCCCCEEEEEEECCCCCEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCH
AAMAEAAE
HHHHHCCC
>Mature Secondary Structure 
STPAAAAAPRRPVLIILHQETSSPGRIGNALRARGYRLDIRRPRFGDPLPKTLAEHSGA
CCCCCCCCCCCCEEEEEECCCCCCCHHHHHHHHCCEEEEECCCCCCCCHHHHHHHHCCE
VIFGGPMSANDPDDFVRREIDWIEVPLREQRPFLGICLGAQMLAIQLGAKVAPHPQGRAE
EEECCCCCCCCHHHHHHHHCCCEECCHHHCCCEEEEHHHHHHHHHHHCCCCCCCCCCCCC
IGYYPIRPTRAGKRLCPHWPDNVYHWHREGFDLPSGADLLAEGVDFPVQAYQYGNATGLQ
CCEECCCCCCCCCCCCCCCCCCHHHHHHCCCCCCCCHHHHHHCCCCCCEEEECCCCCCCE
FHPDVTYAMMCRWTTRGHARLDTPGACPRHHHFEGRAVHDAAERVWLKHFLDGWLARQPV
ECCCCCEEEEEEECCCCCEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCH
AAMAEAAE
HHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7612925; 11677609 [H]