Definition | Bradyrhizobium sp. ORS278 chromosome, complete genome. |
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Accession | NC_009445 |
Length | 7,456,587 |
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The map label for this gene is phhB
Identifier: 146337416
GI number: 146337416
Start: 270442
End: 270744
Strand: Reverse
Name: phhB
Synonym: BRADO0254
Alternate gene names: NA
Gene position: 270744-270442 (Counterclockwise)
Preceding gene: 146337419
Following gene: 146337415
Centisome position: 3.63
GC content: 67.99
Gene sequence:
>303_bases ATGGTGGAGCGACTGTCGGCCGAGGCGCGCGCGAGCGCCCTGCGGGATCTTTCGGGCTGGGCCGAGCTCGACGGCCGCGA GGCGATCAGCCGGACGTTCACCTTCCGGGATTTCAACGAAGCCTTCGGCTTCATGACACGGGTCGCGCTCATCGCCGAGA AGCGCGATCATCATCCGGAGTGGCGGAACGTCTACCGCACCGTCGAGGTGGTGCTCGCCACCCACGATGCCGGCGGCGTG ACCATGCTCGACATCGAGCTGGCGCGCGCGATGGACGCGATTGCGGCTGCGATCAGCGGCTGA
Upstream 100 bases:
>100_bases CTGGCGGCCAGCGCGTGGTCGGGGGCCGTGAACTGACCGGTAAGTTTCGGCTCGTCCGGTCGGCCGGCGAGACGACGGTG GATGGAATCGGAGGATTGCA
Downstream 100 bases:
>100_bases CATCGTCCAGCTGCGTCCTGTCCTGCACGGCCCTGCGACGCTCGTGGCGCCTTGCGGCAGAGGATGGCCGCCCCACATGA ACCGCGGGATGACCGCGCTG
Product: pterin-4-alpha-carbinolamine dehydratase
Products: NA
Alternate protein names: PHS; 4-alpha-hydroxy-tetrahydropterin dehydratase; Pterin carbinolamine dehydratase; PCD
Number of amino acids: Translated: 100; Mature: 100
Protein sequence:
>100_residues MVERLSAEARASALRDLSGWAELDGREAISRTFTFRDFNEAFGFMTRVALIAEKRDHHPEWRNVYRTVEVVLATHDAGGV TMLDIELARAMDAIAAAISG
Sequences:
>Translated_100_residues MVERLSAEARASALRDLSGWAELDGREAISRTFTFRDFNEAFGFMTRVALIAEKRDHHPEWRNVYRTVEVVLATHDAGGV TMLDIELARAMDAIAAAISG >Mature_100_residues MVERLSAEARASALRDLSGWAELDGREAISRTFTFRDFNEAFGFMTRVALIAEKRDHHPEWRNVYRTVEVVLATHDAGGV TMLDIELARAMDAIAAAISG
Specific function: Unknown
COG id: COG2154
COG function: function code H; Pterin-4a-carbinolamine dehydratase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the pterin-4-alpha-carbinolamine dehydratase family
Homologues:
Organism=Homo sapiens, GI4557831, Length=98, Percent_Identity=54.0816326530612, Blast_Score=111, Evalue=2e-25, Organism=Homo sapiens, GI134133240, Length=99, Percent_Identity=50.5050505050505, Blast_Score=111, Evalue=2e-25, Organism=Caenorhabditis elegans, GI115533705, Length=92, Percent_Identity=52.1739130434783, Blast_Score=106, Evalue=2e-24, Organism=Drosophila melanogaster, GI45549100, Length=97, Percent_Identity=49.4845360824742, Blast_Score=105, Evalue=7e-24,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): PHS_BRASO (A4YJY8)
Other databases:
- EMBL: CU234118 - RefSeq: YP_001202464.1 - ProteinModelPortal: A4YJY8 - SMR: A4YJY8 - STRING: A4YJY8 - GeneID: 5116664 - GenomeReviews: CU234118_GR - KEGG: bra:BRADO0254 - eggNOG: COG2154 - HOGENOM: HBG705804 - OMA: SEERKTR - ProtClustDB: PRK00823 - BioCyc: BSP376:BRADO0254-MONOMER - HAMAP: MF_00434 - InterPro: IPR001533 - Gene3D: G3DSA:3.30.1360.20 - PANTHER: PTHR12599
Pfam domain/function: PF01329 Pterin_4a; SSF55248 Trans_pterinDh
EC number: =4.2.1.96
Molecular weight: Translated: 11123; Mature: 11123
Theoretical pI: Translated: 5.15; Mature: 5.15
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 4.0 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 4.0 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVERLSAEARASALRDLSGWAELDGREAISRTFTFRDFNEAFGFMTRVALIAEKRDHHPE CCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCHH WRNVYRTVEVVLATHDAGGVTMLDIELARAMDAIAAAISG HHHHHHHHHHHEEECCCCCEEEEHHHHHHHHHHHHHHHCC >Mature Secondary Structure MVERLSAEARASALRDLSGWAELDGREAISRTFTFRDFNEAFGFMTRVALIAEKRDHHPE CCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCHH WRNVYRTVEVVLATHDAGGVTMLDIELARAMDAIAAAISG HHHHHHHHHHHEEECCCCCEEEEHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA