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The map label for this gene is sdhD

Identifier: 146337398

GI number: 146337398

Start: 248752

End: 249126

Strand: Direct

Name: sdhD

Synonym: BRADO0233

Alternate gene names: NA

Gene position: 248752-249126 (Clockwise)

Preceding gene: 146337397

Following gene: 146337399

Centisome position: 3.34

GC content: 63.2

Gene sequence:

>375_bases
ATGCGGACCCCGCTGGGCCGCGTCCGCAACCTCGGTGCGGCTCACTCCGGCACGGGAGACTTCTGGCGTCAGCGCATCAC
CGCGGTCGCGATGACCCTGCTGATCGTGCCGGTCGTCGTCGTCGTCATCATGCTGCTCGGCCGCAACCAGGCCGGTGCTG
CGCAGATCCTCGGCTCGCTGCCGATCGCGCTGATCATGCTGCTGTTCGTGGTCGCCAGCTGCTGGCACATGAAGATCGGC
ATGCAGGTGATCATCGAGGACTACGTGCACACCGAGTCGCTCAAACTCATCGCGATCATGGGCAACAACTTCTTTGCCGT
GACCGTGGCGATCGCCTCGATCTACGCCCTCATCAAACTGTCCACTGGAGTCTAG

Upstream 100 bases:

>100_bases
CCTGGGGTGCACTGATCGGCGGCATCTCCTTGACCGTTCTGGTGTGGATCGTGGCTTACGCCGTTGGAGGTGGCCGATGA
GCGACGCGCGCGCAAAATCG

Downstream 100 bases:

>100_bases
CGAATGGCCGGCGGAGCAAATGGCAGCGCGAACGGCGCGCCCGCGACGAACGGAAAAGCCTATCCGATCGAGGACCACAC
CTACGATGTCGTCGTGGTCG

Product: succinate dehydrogenase hydrophobic membrane anchor protein

Products: fumarate; reduced acceptor

Alternate protein names: Succinate Dehydrogenase Hydrophobic Membrane Anchor; Succinate Dehydrogenase Cytochrome B Subunit; Succinate Dehydrogenase Subunit D; Succinate Dehydrogenase Membrane Anchor Subunit; Succinate Dehydrogenase Hydrophobic Membrane Anchor Subunit; Succinate Dehydrogenase Hydrophobic Anchor Subunit; Succinate Dehydrogenase Cytochrome B Small Subunit; Succinate Dehydrogenase Membrane Anchor Subunit Protein

Number of amino acids: Translated: 124; Mature: 124

Protein sequence:

>124_residues
MRTPLGRVRNLGAAHSGTGDFWRQRITAVAMTLLIVPVVVVVIMLLGRNQAGAAQILGSLPIALIMLLFVVASCWHMKIG
MQVIIEDYVHTESLKLIAIMGNNFFAVTVAIASIYALIKLSTGV

Sequences:

>Translated_124_residues
MRTPLGRVRNLGAAHSGTGDFWRQRITAVAMTLLIVPVVVVVIMLLGRNQAGAAQILGSLPIALIMLLFVVASCWHMKIG
MQVIIEDYVHTESLKLIAIMGNNFFAVTVAIASIYALIKLSTGV
>Mature_124_residues
MRTPLGRVRNLGAAHSGTGDFWRQRITAVAMTLLIVPVVVVVIMLLGRNQAGAAQILGSLPIALIMLLFVVASCWHMKIG
MQVIIEDYVHTESLKLIAIMGNNFFAVTVAIASIYALIKLSTGV

Specific function: Unknown

COG id: COG2142

COG function: function code C; Succinate dehydrogenase, hydrophobic anchor subunit

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: 1.3.99.1

Molecular weight: Translated: 13373; Mature: 13373

Theoretical pI: Translated: 10.70; Mature: 10.70

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
5.6 %Met     (Translated Protein)
6.5 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
5.6 %Met     (Mature Protein)
6.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRTPLGRVRNLGAAHSGTGDFWRQRITAVAMTLLIVPVVVVVIMLLGRNQAGAAQILGSL
CCCCHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHC
PIALIMLLFVVASCWHMKIGMQVIIEDYVHTESLKLIAIMGNNFFAVTVAIASIYALIKL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCCHHHHHHHHHHHHHHHHH
STGV
HCCC
>Mature Secondary Structure
MRTPLGRVRNLGAAHSGTGDFWRQRITAVAMTLLIVPVVVVVIMLLGRNQAGAAQILGSL
CCCCHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHC
PIALIMLLFVVASCWHMKIGMQVIIEDYVHTESLKLIAIMGNNFFAVTVAIASIYALIKL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCCHHHHHHHHHHHHHHHHH
STGV
HCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: succinate; acceptor

Specific reaction: succinate + acceptor = fumarate + reduced acceptor

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA