Definition | Bradyrhizobium sp. ORS278 chromosome, complete genome. |
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Accession | NC_009445 |
Length | 7,456,587 |
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The map label for this gene is 146337390
Identifier: 146337390
GI number: 146337390
Start: 236042
End: 236809
Strand: Reverse
Name: 146337390
Synonym: BRADO0223
Alternate gene names: NA
Gene position: 236809-236042 (Counterclockwise)
Preceding gene: 146337391
Following gene: 146337388
Centisome position: 3.18
GC content: 66.02
Gene sequence:
>768_bases GTGGCCTGCGCCGTTGCGGCCTGCGCCCTGACCAGCGTCGCCGGCCACGCCACCGCCCAGACCACGCCGGCGCCCAAGGC CGCCCAGAAGAGCGGCGGCCAGCTCAACGCCTCGGACCAGCAGCGCGGCCAGCCGCCCGCAACCGTTCAAACCACGCCGC CCAACCCGATCATCCCCGACCCCCGGCGCAACGTGCCGGCGAGCATCTTCACCTCGTTCGACGCCAACCAGAAGGCGGTC GCGGCCAAGGTCAGTGCCTATCTGTCGTCGCTGCAGACGCTGGTCGGGAATTTCGTCCAGGTCGGTCCCGACGGCAGCAA GACCAAGGGCGATTTCTACATCCAGAAGCCCGGAAAGGTGCGCTTCGAATACGAGCCGCCGACGCCGATCGACATCATCG CCGACGGCTCGTCGCTGGTGGTGCGCGACCGCAAGCTCGCCACTCAGGATGTCTATCCGCTGTCGCAGACGCCGCTGCGC TACCTGTTGTCCGACCGCATCGACCTGCTCAAGGACACCAACGTGATCGCGGTCACCGCGGACGAGCTCTACGTCACGAT CACGATCGAGGAGAAGCAAGCGCTGATTGGCACCAGCCGGCTGATGCTGATGCTCGGCGCCAAGGACGGCCAGCTCAAGC AGTGGACCGTGACCGACCCGCAGGGCTACGACACCACGATCGCGGTCTATAATCTCGACACCACCAAGAAGCTCGATCCG GCGATGTTCAAGATCGACTTCACCAACTACGCGACGCCGCCGGGCTGA
Upstream 100 bases:
>100_bases CACGATAGAAACGCGTAGAAATCAGGACGTCGTTTTGAAAAGCTCCTTCTCGAACAGCCCCTTTTCGCTCCCGCGCGGCC GCCGCACGACGGCCCGACTC
Downstream 100 bases:
>100_bases GCGACCGCTGCCTCGGCGCGCGGGTCAGCTCGTCTGCAGGCCGCGCACCTTCCACTGCGCCTCCGACAGCACGAGCTTCT CGAAGCGCTTGCGCGCCTCC
Product: putative signal peptide
Products: NA
Alternate protein names: Outer Membrane Lipoprotein Carrier Protein; Twin-Arginine Translocation Pathway Signal; Outer Membrane Lipoproteins Carrier Protein; Outer-Membrane Lipoprotein Carrier Protein; Outer-Membrane Lipoproteins Carrier Protein; Outer Membrane Lipoprotein-Sorting Protein; Outer Membrane Lipoprotein Carrier Protein Lola; Signal Peptide; LolA Family Protein; LolA Family Outer Membrane Lipoprotein Carrier Protein; LolA Type Protein; Outer Membrane Lipoprotein Carrier Protein LolA Family
Number of amino acids: Translated: 255; Mature: 254
Protein sequence:
>255_residues MACAVAACALTSVAGHATAQTTPAPKAAQKSGGQLNASDQQRGQPPATVQTTPPNPIIPDPRRNVPASIFTSFDANQKAV AAKVSAYLSSLQTLVGNFVQVGPDGSKTKGDFYIQKPGKVRFEYEPPTPIDIIADGSSLVVRDRKLATQDVYPLSQTPLR YLLSDRIDLLKDTNVIAVTADELYVTITIEEKQALIGTSRLMLMLGAKDGQLKQWTVTDPQGYDTTIAVYNLDTTKKLDP AMFKIDFTNYATPPG
Sequences:
>Translated_255_residues MACAVAACALTSVAGHATAQTTPAPKAAQKSGGQLNASDQQRGQPPATVQTTPPNPIIPDPRRNVPASIFTSFDANQKAV AAKVSAYLSSLQTLVGNFVQVGPDGSKTKGDFYIQKPGKVRFEYEPPTPIDIIADGSSLVVRDRKLATQDVYPLSQTPLR YLLSDRIDLLKDTNVIAVTADELYVTITIEEKQALIGTSRLMLMLGAKDGQLKQWTVTDPQGYDTTIAVYNLDTTKKLDP AMFKIDFTNYATPPG >Mature_254_residues ACAVAACALTSVAGHATAQTTPAPKAAQKSGGQLNASDQQRGQPPATVQTTPPNPIIPDPRRNVPASIFTSFDANQKAVA AKVSAYLSSLQTLVGNFVQVGPDGSKTKGDFYIQKPGKVRFEYEPPTPIDIIADGSSLVVRDRKLATQDVYPLSQTPLRY LLSDRIDLLKDTNVIAVTADELYVTITIEEKQALIGTSRLMLMLGAKDGQLKQWTVTDPQGYDTTIAVYNLDTTKKLDPA MFKIDFTNYATPPG
Specific function: Unknown
COG id: COG2834
COG function: function code M; Outer membrane lipoprotein-sorting protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 27429; Mature: 27298
Theoretical pI: Translated: 8.15; Mature: 8.15
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MACAVAACALTSVAGHATAQTTPAPKAAQKSGGQLNASDQQRGQPPATVQTTPPNPIIPD CCHHHHHHHHHHHCCCCCCCCCCCCCHHHHCCCCCCCCHHHCCCCCCEEEECCCCCCCCC PRRNVPASIFTSFDANQKAVAAKVSAYLSSLQTLVGNFVQVGPDGSKTKGDFYIQKPGKV CCCCCCHHEEECCCCCCHHHHHHHHHHHHHHHHHHHHHEEECCCCCCCCCCEEEECCCCE RFEYEPPTPIDIIADGSSLVVRDRKLATQDVYPLSQTPLRYLLSDRIDLLKDTNVIAVTA EEEECCCCCEEEEECCCEEEEECCHHHHCCCCCCCCHHHHHHHHHHHHHHCCCCEEEEEE DELYVTITIEEKQALIGTSRLMLMLGAKDGQLKQWTVTDPQGYDTTIAVYNLDTTKKLDP CCEEEEEEECCCCHHHCCCEEEEEEECCCCCEEEEEECCCCCCCCEEEEEECCCCCCCCC AMFKIDFTNYATPPG EEEEEEECCCCCCCC >Mature Secondary Structure ACAVAACALTSVAGHATAQTTPAPKAAQKSGGQLNASDQQRGQPPATVQTTPPNPIIPD CHHHHHHHHHHHCCCCCCCCCCCCCHHHHCCCCCCCCHHHCCCCCCEEEECCCCCCCCC PRRNVPASIFTSFDANQKAVAAKVSAYLSSLQTLVGNFVQVGPDGSKTKGDFYIQKPGKV CCCCCCHHEEECCCCCCHHHHHHHHHHHHHHHHHHHHHEEECCCCCCCCCCEEEECCCCE RFEYEPPTPIDIIADGSSLVVRDRKLATQDVYPLSQTPLRYLLSDRIDLLKDTNVIAVTA EEEECCCCCEEEEECCCEEEEECCHHHHCCCCCCCCHHHHHHHHHHHHHHCCCCEEEEEE DELYVTITIEEKQALIGTSRLMLMLGAKDGQLKQWTVTDPQGYDTTIAVYNLDTTKKLDP CCEEEEEEECCCCHHHCCCEEEEEEECCCCCEEEEEECCCCCCCCEEEEEECCCCCCCCC AMFKIDFTNYATPPG EEEEEEECCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA