Definition | Bradyrhizobium sp. ORS278 chromosome, complete genome. |
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Accession | NC_009445 |
Length | 7,456,587 |
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The map label for this gene is pmtA
Identifier: 146337331
GI number: 146337331
Start: 174065
End: 174667
Strand: Reverse
Name: pmtA
Synonym: BRADO0162
Alternate gene names: NA
Gene position: 174667-174065 (Counterclockwise)
Preceding gene: 146337332
Following gene: 146337330
Centisome position: 2.34
GC content: 66.33
Gene sequence:
>603_bases ATGCCCCTGCAAACGTCCGTGCGTGCGTCGAAAAAGCCTCTTCGTCTGGACGACGAGGTGCGCTTCCTCCGCTCATGGAT CGAGAAGCCGCTGCATATGGGCGCCGTGATGCCGTCGGGCCGGCTGCTCGCGCGCACCATGGCGCAGTATGTCGATCCGC ATGGCACGGGCCCGGTCATCGAGCTCGGGCCAGGCACCGGCGCGATCACCGCGGCTCTGGTCGAGCACGGGATCGATCAG AAACGTCTCGTCCTGGTCGAATACAATCCGAGTTTCTGCGCGCTGCTGCGCGATCGCTACCCGCACGCCAAGGTCGTGCA GGGTGATGCCTATCGCCTGCGCGACACGTTGTGGAACGTGCTGGGCGCCCCGGCTTCGGCGGTCGTCTCCGGCCTGCCGC TGGTGACCAAGCCGATGCTCACCCGCATGAAGCTGGTGCGCGACGCCTTCGCGGCGATGTCGCCTAACGCCCCCTTCGTG CAGTTCACCTATTCCGTCGTGCCGCCGATTCCGAAATCGCTGCCCGGCGTCACCACCCAGGCGTCCGAGCGGATCTGGAT GAACCTTCCGCCGGCGCGCGTCTGGGTGTATCGCAAGCCCTGA
Upstream 100 bases:
>100_bases TCGTGAGTTACGGTTCGGCTTGACCGCCCCGCCTGCGACCTATACGTCTTTGTGACTCTTTTCTGACATCGCCGTGAAAA CGGTCCCGTCTGGTACTGAG
Downstream 100 bases:
>100_bases CCGGCAGCCGCGATGTGCGCGGCGGGTCGCAGACCCGTCCGCCCGATGTCCGCCCTCAAGATCCTGATCATCCCCGGCTC GACCCGGTCCGGCTCCCACA
Product: phospholipid N-methyltransferase
Products: NA
Alternate protein names: Ribosomal RNA Adenine Methylase Transferase; Methyltransferase Type; Methyltransferase; Ribosomal RNA Adenine Dimethylase; Ribosomal RNA Adenine Dimethylase Domain-Containing Protein; Phospholipid N-Methyltransferase PmtA; Ribosomal RNA Adenine Dimethylase Domain Protein; Phospholipid N-Methyltransferase Protein; Phospholipid N-Methyltransferase-Like Protein; Conserved Protein; Phosphatidylethanolamine N-Methyltransferase; Phospholipid N-Methyltransferase-Like; Phosphatidyl-N-Methylethanolamine N-Methyltransferase; Methyltransferase Domain Family Protein; RNA Adenine Methylase Transferase; Secreted Protein; Cation-Transporting P-Type ATPase
Number of amino acids: Translated: 200; Mature: 199
Protein sequence:
>200_residues MPLQTSVRASKKPLRLDDEVRFLRSWIEKPLHMGAVMPSGRLLARTMAQYVDPHGTGPVIELGPGTGAITAALVEHGIDQ KRLVLVEYNPSFCALLRDRYPHAKVVQGDAYRLRDTLWNVLGAPASAVVSGLPLVTKPMLTRMKLVRDAFAAMSPNAPFV QFTYSVVPPIPKSLPGVTTQASERIWMNLPPARVWVYRKP
Sequences:
>Translated_200_residues MPLQTSVRASKKPLRLDDEVRFLRSWIEKPLHMGAVMPSGRLLARTMAQYVDPHGTGPVIELGPGTGAITAALVEHGIDQ KRLVLVEYNPSFCALLRDRYPHAKVVQGDAYRLRDTLWNVLGAPASAVVSGLPLVTKPMLTRMKLVRDAFAAMSPNAPFV QFTYSVVPPIPKSLPGVTTQASERIWMNLPPARVWVYRKP >Mature_199_residues PLQTSVRASKKPLRLDDEVRFLRSWIEKPLHMGAVMPSGRLLARTMAQYVDPHGTGPVIELGPGTGAITAALVEHGIDQK RLVLVEYNPSFCALLRDRYPHAKVVQGDAYRLRDTLWNVLGAPASAVVSGLPLVTKPMLTRMKLVRDAFAAMSPNAPFVQ FTYSVVPPIPKSLPGVTTQASERIWMNLPPARVWVYRKP
Specific function: Unknown
COG id: COG3963
COG function: function code I; Phospholipid N-methyltransferase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 22147; Mature: 22016
Theoretical pI: Translated: 10.70; Mature: 10.70
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 4.0 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 3.5 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPLQTSVRASKKPLRLDDEVRFLRSWIEKPLHMGAVMPSGRLLARTMAQYVDPHGTGPVI CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCCCCCEE ELGPGTGAITAALVEHGIDQKRLVLVEYNPSFCALLRDRYPHAKVVQGDAYRLRDTLWNV EECCCCHHHHHHHHHCCCCCCEEEEEEECCHHHHHHHHCCCCCEEECCCHHHHHHHHHHH LGAPASAVVSGLPLVTKPMLTRMKLVRDAFAAMSPNAPFVQFTYSVVPPIPKSLPGVTTQ HCCCHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEECCCCCCCCCCCCCC ASERIWMNLPPARVWVYRKP CCCEEEEECCCCEEEEEECC >Mature Secondary Structure PLQTSVRASKKPLRLDDEVRFLRSWIEKPLHMGAVMPSGRLLARTMAQYVDPHGTGPVI CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCCCCCEE ELGPGTGAITAALVEHGIDQKRLVLVEYNPSFCALLRDRYPHAKVVQGDAYRLRDTLWNV EECCCCHHHHHHHHHCCCCCCEEEEEEECCHHHHHHHHCCCCCEEECCCHHHHHHHHHHH LGAPASAVVSGLPLVTKPMLTRMKLVRDAFAAMSPNAPFVQFTYSVVPPIPKSLPGVTTQ HCCCHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEECCCCCCCCCCCCCC ASERIWMNLPPARVWVYRKP CCCEEEEECCCCEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA