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The map label for this gene is yhbH [C]

Identifier: 146337285

GI number: 146337285

Start: 126231

End: 126833

Strand: Reverse

Name: yhbH [C]

Synonym: BRADO0112

Alternate gene names: 146337285

Gene position: 126833-126231 (Counterclockwise)

Preceding gene: 146337286

Following gene: 146337284

Centisome position: 1.7

GC content: 64.18

Gene sequence:

>603_bases
ATGACCCTGCGGATTTCCGGAAAAAGCATCAGCGTCAGCGAAGCGCTGCGCGGCCGCGTCAGCGAGCGCACCGACGAGGT
GCTGCGCAAATATTTCGACGGCAATTATTCCGGTCACGTCACGCTGTCCAAGGACGGCTTCGGGTTCAAGACCGATTGCG
CACTGCACCTTGATTCGGGGATCACGCTCGAAGCCGAATCGAACGCGCCGGACGCCTATGCGAGCGCCGACCAGGCGCTG
CTGATGATCGAGAAGCGGCTGCGCCGCTACAAGAGCCGGCTGAAGGACCGCTCGGCGCGCAAATCTCACGCCGCCAATGC
CGCGCTTGCCGGTCTCGAGGGGGCCGTTCTCGACGCGCCGAGCTACGTCATCGAGGCGCCGGCCGAGGGCGACGAGGAGA
TCACCGGCTACAATCCCGTGATCATTGCCGAGAACACCACCGCGCTGAAGCGGCTGTCGGTCTCCGAAGCGGTGCTGGAG
CTCGATCTTTCCGGTGCACCCTGCATGGTTTTTCAGCACGGCTCCAGCGGGCGCGTGAACATCATCTATCGCCGCGCCGA
CGGCAATATCGGTTGGGTCGATCCGCCGGCGGTCAAGCCGTAG

Upstream 100 bases:

>100_bases
GTCAGTTTGACCGCTACGGTCAGTTTGACCGTGCCCCGCGATTGCGCCTTAACCAAATAGGCTTAGTGTCATACTCGGTT
CACATGAATCGAGGCGACAC

Downstream 100 bases:

>100_bases
TCGTACGGACGGCGGCACCGGGGTTCCGGTCGCGACGCGGAAAATCGGTTCCGCGTCAGGTGCTTGACCATGCGCTTGCG
ACCTCACGCCACGGCTGCGA

Product: sigma-54 modulation protein

Products: NA

Alternate protein names: ORF203 [H]

Number of amino acids: Translated: 200; Mature: 199

Protein sequence:

>200_residues
MTLRISGKSISVSEALRGRVSERTDEVLRKYFDGNYSGHVTLSKDGFGFKTDCALHLDSGITLEAESNAPDAYASADQAL
LMIEKRLRRYKSRLKDRSARKSHAANAALAGLEGAVLDAPSYVIEAPAEGDEEITGYNPVIIAENTTALKRLSVSEAVLE
LDLSGAPCMVFQHGSSGRVNIIYRRADGNIGWVDPPAVKP

Sequences:

>Translated_200_residues
MTLRISGKSISVSEALRGRVSERTDEVLRKYFDGNYSGHVTLSKDGFGFKTDCALHLDSGITLEAESNAPDAYASADQAL
LMIEKRLRRYKSRLKDRSARKSHAANAALAGLEGAVLDAPSYVIEAPAEGDEEITGYNPVIIAENTTALKRLSVSEAVLE
LDLSGAPCMVFQHGSSGRVNIIYRRADGNIGWVDPPAVKP
>Mature_199_residues
TLRISGKSISVSEALRGRVSERTDEVLRKYFDGNYSGHVTLSKDGFGFKTDCALHLDSGITLEAESNAPDAYASADQALL
MIEKRLRRYKSRLKDRSARKSHAANAALAGLEGAVLDAPSYVIEAPAEGDEEITGYNPVIIAENTTALKRLSVSEAVLEL
DLSGAPCMVFQHGSSGRVNIIYRRADGNIGWVDPPAVKP

Specific function: Probably modulates the activity of sigma(54) (rpoN) [H]

COG id: COG1544

COG function: function code J; Ribosome-associated protein Y (PSrp-1)

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the sigma(54) modulation protein family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003489 [H]

Pfam domain/function: PF02482 Ribosomal_S30AE [H]

EC number: NA

Molecular weight: Translated: 21610; Mature: 21478

Theoretical pI: Translated: 6.52; Mature: 6.52

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTLRISGKSISVSEALRGRVSERTDEVLRKYFDGNYSGHVTLSKDGFGFKTDCALHLDSG
CEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCEEEEEECCC
ITLEAESNAPDAYASADQALLMIEKRLRRYKSRLKDRSARKSHAANAALAGLEGAVLDAP
EEEEECCCCCCCHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCC
SYVIEAPAEGDEEITGYNPVIIAENTTALKRLSVSEAVLELDLSGAPCMVFQHGSSGRVN
CEEEECCCCCCCCCCCCCCEEEECCCHHHHHHHHHHHEEEEECCCCCEEEEECCCCCEEE
IIYRRADGNIGWVDPPAVKP
EEEEECCCCCCCCCCCCCCC
>Mature Secondary Structure 
TLRISGKSISVSEALRGRVSERTDEVLRKYFDGNYSGHVTLSKDGFGFKTDCALHLDSG
EEEECCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCEEEEEECCC
ITLEAESNAPDAYASADQALLMIEKRLRRYKSRLKDRSARKSHAANAALAGLEGAVLDAP
EEEEECCCCCCCHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCC
SYVIEAPAEGDEEITGYNPVIIAENTTALKRLSVSEAVLELDLSGAPCMVFQHGSSGRVN
CEEEECCCCCCCCCCCCCCEEEECCCHHHHHHHHHHHEEEEECCCCCEEEEECCCCCEEE
IIYRRADGNIGWVDPPAVKP
EEEEECCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 1991712; 12597275 [H]