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The map label for this gene is accD [H]

Identifier: 146337262

GI number: 146337262

Start: 105635

End: 106573

Strand: Reverse

Name: accD [H]

Synonym: BRADO0089

Alternate gene names: 146337262

Gene position: 106573-105635 (Counterclockwise)

Preceding gene: 146337263

Following gene: 146337261

Centisome position: 1.43

GC content: 67.31

Gene sequence:

>939_bases
ATGAACTGGCTTACCAACGTGGTCCGGCCGAAGATCCGCAACATCCTGCGCCGCGAGACGCCGGAGAACCTCTGGATCAA
GTGCCCGGATTCCGGACAGCTCGTGTTCTACAAGGACGTCGAGGCCAACCAGTTCGTCATCCCCGGCTCCAACTATCACA
TGCGCATGGGCGCATCGGCCCGGCTCAAGTCGATGTTCGACAACGAGACCTGGTTCGACGTCGCGCTGCCCGAGGTGACG
CCCGACCCGCTCAAATTCCGTGACGAGCGCCGCTATGCCGACCGCATCAAGGATGCGCGGGCGCGCACCGGCATGAACGA
TGCCGTCAAGGTCGGCTTCGGCAAGCTCGAAGGCATGGGCGTCGTCATCGCCGTGCAGGATTTCGATTTCATGGGCGGCT
CGCTCGGCATGGCCGCCGGCGAGGCGATCGTGCGGGGGCTGGAGCTCGCGGTCGAGAAGAAGTCGCCCTTCATCGTGTTC
GCGGCCTCCGGCGGCGCGCGCATGCAGGAGGGCATCCTGTCGCTGATGCAGATGCCGCGCACCACAGTGGCCGTGCAGAT
GCTGCGCGAGGCCAGACTGCCCTACATCGTGGTGCAGACCAATCCGACCACCGGCGGCGTCACCGCGTCCTATGCGATGC
TCGGCGACGTCCACATCGCCGAGCCCGGCGCGCTGATCGGCTTCGCCGGCGCGCGCGTCATCGAGCAGACCATCCGCGAA
AAGCTGCCGGAGGGTTTCCAGCGCGCCGAGTACCTGCTCGATCACGGCATGGTCGACATGGTCGTGCATCGTCATGATCT
GCGCCCGACTCTGGCGCGGCTGTGCCGGCTGCTGACCAAGGCGCCGGCCGTCGAACACGCCAAGCCCGCGCCGCAACTGC
CGCCGCCGGCCAAGCCCGCCGAGACGGCGGAAGCGCCGGCGGTCGCAACGAGCGCGTGA

Upstream 100 bases:

>100_bases
GAATAGCCATCAACCACCCTTGCATGGAGCGCCGCGGCACGGCTTGCCGTGGCGCTGCCGTCCCGCCATATATCCGGGCG
ACCGCAAAACGGAGCTTTTC

Downstream 100 bases:

>100_bases
ACGATCCCGCCAGCCAGCCCAAGCCTTCGCTCGACGAGCTGATCACGCGGCTCTCGGCGCTGCATCCGAGCAAGATCTCG
CTCGGGCTGGAGCGCATGCA

Product: acetyl-CoA carboxylase subunit beta

Products: NA

Alternate protein names: ACCase subunit beta; Acetyl-CoA carboxylase carboxyltransferase subunit beta [H]

Number of amino acids: Translated: 312; Mature: 312

Protein sequence:

>312_residues
MNWLTNVVRPKIRNILRRETPENLWIKCPDSGQLVFYKDVEANQFVIPGSNYHMRMGASARLKSMFDNETWFDVALPEVT
PDPLKFRDERRYADRIKDARARTGMNDAVKVGFGKLEGMGVVIAVQDFDFMGGSLGMAAGEAIVRGLELAVEKKSPFIVF
AASGGARMQEGILSLMQMPRTTVAVQMLREARLPYIVVQTNPTTGGVTASYAMLGDVHIAEPGALIGFAGARVIEQTIRE
KLPEGFQRAEYLLDHGMVDMVVHRHDLRPTLARLCRLLTKAPAVEHAKPAPQLPPPAKPAETAEAPAVATSA

Sequences:

>Translated_312_residues
MNWLTNVVRPKIRNILRRETPENLWIKCPDSGQLVFYKDVEANQFVIPGSNYHMRMGASARLKSMFDNETWFDVALPEVT
PDPLKFRDERRYADRIKDARARTGMNDAVKVGFGKLEGMGVVIAVQDFDFMGGSLGMAAGEAIVRGLELAVEKKSPFIVF
AASGGARMQEGILSLMQMPRTTVAVQMLREARLPYIVVQTNPTTGGVTASYAMLGDVHIAEPGALIGFAGARVIEQTIRE
KLPEGFQRAEYLLDHGMVDMVVHRHDLRPTLARLCRLLTKAPAVEHAKPAPQLPPPAKPAETAEAPAVATSA
>Mature_312_residues
MNWLTNVVRPKIRNILRRETPENLWIKCPDSGQLVFYKDVEANQFVIPGSNYHMRMGASARLKSMFDNETWFDVALPEVT
PDPLKFRDERRYADRIKDARARTGMNDAVKVGFGKLEGMGVVIAVQDFDFMGGSLGMAAGEAIVRGLELAVEKKSPFIVF
AASGGARMQEGILSLMQMPRTTVAVQMLREARLPYIVVQTNPTTGGVTASYAMLGDVHIAEPGALIGFAGARVIEQTIRE
KLPEGFQRAEYLLDHGMVDMVVHRHDLRPTLARLCRLLTKAPAVEHAKPAPQLPPPAKPAETAEAPAVATSA

Specific function: Component of the acetyl coenzyme A carboxylase (ACC) complex. Biotin carboxylase (BC) catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the transcarboxylase to acetyl-CoA to form malonyl- CoA [H

COG id: COG0777

COG function: function code I; Acetyl-CoA carboxylase beta subunit

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the AccD/PCCB family [H]

Homologues:

Organism=Escherichia coli, GI1788655, Length=294, Percent_Identity=46.9387755102041, Blast_Score=270, Evalue=9e-74,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000438
- InterPro:   IPR000022
- InterPro:   IPR011762 [H]

Pfam domain/function: PF01039 Carboxyl_trans [H]

EC number: =6.4.1.2 [H]

Molecular weight: Translated: 34306; Mature: 34306

Theoretical pI: Translated: 9.04; Mature: 9.04

Prosite motif: PS01159 WW_DOMAIN_1 ; PS50980 COA_CT_NTER

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
4.8 %Met     (Translated Protein)
5.4 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
4.8 %Met     (Mature Protein)
5.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNWLTNVVRPKIRNILRRETPENLWIKCPDSGQLVFYKDVEANQFVIPGSNYHMRMGASA
CCHHHHHHHHHHHHHHHHCCCCCCEEECCCCCCEEEEEECCCCEEEECCCCEEEECCCHH
RLKSMFDNETWFDVALPEVTPDPLKFRDERRYADRIKDARARTGMNDAVKVGFGKLEGMG
HHHHHHCCCCEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHCCCCEECCCE
VVIAVQDFDFMGGSLGMAAGEAIVRGLELAVEKKSPFIVFAASGGARMQEGILSLMQMPR
EEEEEECCCCCCCCHHHHHHHHHHHHHHHEEECCCCEEEEECCCCHHHHHHHHHHHHCCH
TTVAVQMLREARLPYIVVQTNPTTGGVTASYAMLGDVHIAEPGALIGFAGARVIEQTIRE
HHHHHHHHHHCCCCEEEEEECCCCCCCEEHHHEECCEEECCCCCEEEHHHHHHHHHHHHH
KLPEGFQRAEYLLDHGMVDMVVHRHDLRPTLARLCRLLTKAPAVEHAKPAPQLPPPAKPA
HHHHHHHHHHHHHHCCHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCC
ETAEAPAVATSA
CCCCCCCCCCCC
>Mature Secondary Structure
MNWLTNVVRPKIRNILRRETPENLWIKCPDSGQLVFYKDVEANQFVIPGSNYHMRMGASA
CCHHHHHHHHHHHHHHHHCCCCCCEEECCCCCCEEEEEECCCCEEEECCCCEEEECCCHH
RLKSMFDNETWFDVALPEVTPDPLKFRDERRYADRIKDARARTGMNDAVKVGFGKLEGMG
HHHHHHCCCCEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHCCCCEECCCE
VVIAVQDFDFMGGSLGMAAGEAIVRGLELAVEKKSPFIVFAASGGARMQEGILSLMQMPR
EEEEEECCCCCCCCHHHHHHHHHHHHHHHEEECCCCEEEEECCCCHHHHHHHHHHHHCCH
TTVAVQMLREARLPYIVVQTNPTTGGVTASYAMLGDVHIAEPGALIGFAGARVIEQTIRE
HHHHHHHHHHCCCCEEEEEECCCCCCCEEHHHEECCEEECCCCCEEEHHHHHHHHHHHHH
KLPEGFQRAEYLLDHGMVDMVVHRHDLRPTLARLCRLLTKAPAVEHAKPAPQLPPPAKPA
HHHHHHHHHHHHHHCCHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCC
ETAEAPAVATSA
CCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA