Definition | Bradyrhizobium sp. ORS278 chromosome, complete genome. |
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Accession | NC_009445 |
Length | 7,456,587 |
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The map label for this gene is crp [C]
Identifier: 146337246
GI number: 146337246
Start: 82971
End: 83453
Strand: Reverse
Name: crp [C]
Synonym: BRADO0073
Alternate gene names: 146337246
Gene position: 83453-82971 (Counterclockwise)
Preceding gene: 146337247
Following gene: 146337243
Centisome position: 1.12
GC content: 64.6
Gene sequence:
>483_bases ATGGCTGTCAGCTCGCCCGACCTGAAAGCATTTCTGCTCGCCACGCCGTTCTTTGGCGGCCTGTCGGATGCGAGCCTCGA CCTGCTGATTTCGATGCTGGGCGTGCGCGAGTTCGAGCGCGGCGCCGTCATCGTCGCCGAGGGTGAGGCGGGCCGCTCGA TGTTCGTCGTGCACAGCGGCACGCTGGAGGTCAGCGAGCGCCTGGAGAGCGGTGGCGCGATCCACATGTCGAGCCTGCAG CCCGGCGATTTCTTCGGCGAAATGACCTTGCTGGAGATGCAGAACCGATCCGCCACGGTGATCGCGGAGACGCCAGCCCT ACTGTACGAGCTCACAGCGCAACAGCTCTATGCGTTCTACAAGGCCGACATTCGCGCCTATGTCATCGTGATGCAGAACA TCAATCGCGAGCTGTGCCGCCGCCTGCGGCGCGCGGATGCGCGGATCAAGATGCTGGAGATGCGGGAGGCGGGGGCGCGT TAG
Upstream 100 bases:
>100_bases CGGACGATCGACGTTCTGGTGCCCGAAGTGTCAGAGATGAGCGAACGGCGCTCCGCCCGGGTCTGCTTGTGACGGCCGGG CTCGGGCGTATACTGCCGTT
Downstream 100 bases:
>100_bases GCCGGCTCTTACCGCGCTTGCAGCAGGCGTATCTCGTTCGACAATCGGGTCGTGTGCTCGGTTATTTCCAAGTCGTTATG GTTGGGCCTGTCCAGGCCAT
Product: putative cAMP-binding protein
Products: NA
Alternate protein names: Crp/Fnr Family Transcriptional Regulator; Transcriptional Regulator; Cyclic AMP Receptor Protein; Catabolite Gene Activator; CAMP-Dependent Protein Kinase Regulatory Subunit; CAMP-Dependent Transcriptional Regulator
Number of amino acids: Translated: 160; Mature: 159
Protein sequence:
>160_residues MAVSSPDLKAFLLATPFFGGLSDASLDLLISMLGVREFERGAVIVAEGEAGRSMFVVHSGTLEVSERLESGGAIHMSSLQ PGDFFGEMTLLEMQNRSATVIAETPALLYELTAQQLYAFYKADIRAYVIVMQNINRELCRRLRRADARIKMLEMREAGAR
Sequences:
>Translated_160_residues MAVSSPDLKAFLLATPFFGGLSDASLDLLISMLGVREFERGAVIVAEGEAGRSMFVVHSGTLEVSERLESGGAIHMSSLQ PGDFFGEMTLLEMQNRSATVIAETPALLYELTAQQLYAFYKADIRAYVIVMQNINRELCRRLRRADARIKMLEMREAGAR >Mature_159_residues AVSSPDLKAFLLATPFFGGLSDASLDLLISMLGVREFERGAVIVAEGEAGRSMFVVHSGTLEVSERLESGGAIHMSSLQP GDFFGEMTLLEMQNRSATVIAETPALLYELTAQQLYAFYKADIRAYVIVMQNINRELCRRLRRADARIKMLEMREAGAR
Specific function: This Protein Complexes With Cyclic AMP And Binds To Specific DNA Sites Near The Promoter To Regulate The Transcription Of Several Catabolite-Sensitive Operons. The Protein Induces A Severe Bend In The DNA. Acts As A Negative Regulator Of Its Own Synthesi
COG id: COG0664
COG function: function code T; cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17694; Mature: 17563
Theoretical pI: Translated: 5.29; Mature: 5.29
Prosite motif: PS00888 CNMP_BINDING_1 ; PS50042 CNMP_BINDING_3
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 5.6 %Met (Translated Protein) 6.2 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 5.0 %Met (Mature Protein) 5.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAVSSPDLKAFLLATPFFGGLSDASLDLLISMLGVREFERGAVIVAEGEAGRSMFVVHSG CCCCCCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHHCCCEEEEEECCCCCEEEEEECC TLEVSERLESGGAIHMSSLQPGDFFGEMTLLEMQNRSATVIAETPALLYELTAQQLYAFY CHHHHHHHCCCCEEEECCCCCCCHHCCEEEEEECCCCEEEEECCHHHHHHHHHHHHHHHH KADIRAYVIVMQNINRELCRRLRRADARIKMLEMREAGAR HHHHHEEEEEHHHCCHHHHHHHHHCCHHEEHHHHHCCCCC >Mature Secondary Structure AVSSPDLKAFLLATPFFGGLSDASLDLLISMLGVREFERGAVIVAEGEAGRSMFVVHSG CCCCCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHHCCCEEEEEECCCCCEEEEEECC TLEVSERLESGGAIHMSSLQPGDFFGEMTLLEMQNRSATVIAETPALLYELTAQQLYAFY CHHHHHHHCCCCEEEECCCCCCCHHCCEEEEEECCCCEEEEECCHHHHHHHHHHHHHHHH KADIRAYVIVMQNINRELCRRLRRADARIKMLEMREAGAR HHHHHEEEEEHHHCCHHHHHHHHHCCHHEEHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: DNA [C]
Specific reaction: Protein + DNA = Protein-DNA [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA