Definition Bradyrhizobium sp. ORS278 chromosome, complete genome.
Accession NC_009445
Length 7,456,587

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The map label for this gene is 146337234

Identifier: 146337234

GI number: 146337234

Start: 68882

End: 70864

Strand: Reverse

Name: 146337234

Synonym: BRADO0060

Alternate gene names: NA

Gene position: 70864-68882 (Counterclockwise)

Preceding gene: 146337235

Following gene: 146337223

Centisome position: 0.95

GC content: 66.62

Gene sequence:

>1983_bases
ATGATGCTGCGTTCGAGGACTTGCATCGTCGCGCTGTGCGCGACGAGCGCGGTGTGGTGCGTCGGCGCAGCGCCGGTGCG
TGCGCAATCGACGGTGTGGGACGCCACGATCTCCAATACGAACTGGTATGTGCCGACGGCCCAGTTGCTGGCCTACATGT
CGCCGAAGACCGGCTTCACCAACCCGATTCCGATCGGCGATCAGACGCTGTGGACCTTGGGCACGGCGACCAACGGCTCC
TTCACGGGAACCAGCGTCGCGCAGCTCAGGATCGGACCCGCGCTGCTCACCGACACCTCGACCATCCAGGGCTTCGTCAC
CACCAGCGGCCAGATCACGATGCTGTTTACGCCGACGGGCGGCGGCACGGTGACGGTCGGGCTCGGCACCATGCGCCTGG
TGAATGGCGTCACCAGCATGGAGATGCAGATGATCACCGGCGACACGCTGCTGGTGACGCATTGGGCCTACATGCTGCCC
TATGATCCCGCGACCTTCACGCCGCCGCCATCGGCACCGGTGCCTGCCAATTCAGTGCCGCAATGGGCGTGGACCGCCGG
GACGCCCTGGCGGATCGTCAGCCCGGCCTTGTTCGGCACGCAGGCGCCGGGCCGCTTCGTCATCACCAACTATCAGAATG
GCTATTTCTGGGGCGCGGGCATCGCGCCCGCCGGTAGCGCAGCCGGCGGCTTCACGCTGCTCGGCTCCGTCACGCCGGAG
GGCCGCGTTCTGTTCAACACGCTGTCGCGTGGCAGCCTGACCAGCCTGTACGGCACCGCCAGCGGCAGTGCGTCGGGCGC
GCAGATGATCGCCTCGATGTACGATCTCGCGGGAAACATGACCGGAGATCTGGCGACGATGTCGCTGGTGCAGCCTTATG
GCGACACGCTGCGTGCGGCGGGTGGTCGTGTCGGCCTCGAGGCCGCTGACGCGCTCTACCGCCTGTCGATGACATCAGCG
GGCTGCAGCGGTGGGATGGCGTCGGGTTTCGCGGCGCTCGACAATCTCAGCGGACCCTCGCTCGGCAACGCCATCAAGCA
GACGCTTCCGGTGCTGACCGGCGCGGCGTCGCAGGCGACCTACGTCACGCAGCGCGATTTCCGGCAGACGATGACCAACC
GGCTCGACGACATGGCAAGCATGCGCATCGCGGCTGGACAACATGTCTGGATGCAGCCGCTCGGCGGCACTGCGCAGCAG
TCGGCCCGCGACGGCGTGCCCGGCTACAATGCGTCCGGCGGCGGCCTGGCTTTCGGCGCCGACGCCCCGCTGTCACCAGG
TGCCGTCATCGGTGGCGTCGCGGCCTATTCGCGCCAGACGATCAGCGGCAGCGACGACGCCGTTCCGAACCGTCTGACGG
TGTCATCCTATCAACTCGGCCTGTACGGCGCCTATGCCGTGAGCCCCGGCCTCCTGCTCGACTATCAGCTCGATGGCGGA
ACCAGCGACAATGGTGAAAGCCGCTCGCTGGGCTTCATGAGCGCGACCGCCGCGGGCAGCTATCGATCCTATGCGGGCCA
TGTCGGCGTGGGTGTGAAGACCCGCATTGCGCTTCAAGACAAGCTCTCGCTCATCCCCTCGCTGCGCCTGGACTACGGCG
CTGTTCGCAGCAACGCCTATCGCGAGAACGGAGCCGACGGCTTCAGTCTCAACGTCGAGACGCAGCGTTATCAGGAACTG
ACGGCCACGGCCGGGCTGAAAGCCGTCTATGCGATCGCAAAACAGGTTCGCCTCAGCGGCGAGGTCGGGGTGGGCTACAA
CGCGCTGAACCAGCGGCTGCAGATCGGCGCCGCCTTCTCTGGCGGTGGAGACAGCTTCACCACCAACGGCCTCGCCCTGT
CGCCTTGGATCTATTCGGCGGGCCTCGGATTAATCGCTGCTCGCAGCGACCGGCTCGATCTCAGCATCCGCTACGGCGTG
AGCGCGACATCGTCCGGGCTGGTCGAGCAGTCCGGACACGCGGTGCTGAAGGTCAGGCTGTGA

Upstream 100 bases:

>100_bases
GCCTCGTTGCGCCACCGACAGGGCAAGGCACCGCGACCAGTGCTTCGGTTCCAAGGCTGGGCCGCGATCGCGCCGGCAGC
ACAGTGACATCGTGGGGGCG

Downstream 100 bases:

>100_bases
GCGCCCTGGTCTACGTGCTGGCTACTCGCCAGCCTACTCGCGGGCGAAATAGTCCGGCAGAGCCTGGTCGAGCCGGAATC
TGAGCATGGAGCGCGCCATG

Product: hypothetical protein

Products: NA

Alternate protein names: Outer Membrane Autotransporter; Autotransporter Domain-Containing Protein; Autotransporter; Serine Endopeptidase; Outer Membrane Autotransporter Barrel; Exoprotein With Autotransporter; Hemagglutinin-Related Protein; Hemagglutinin-Related Autotransporter Protein

Number of amino acids: Translated: 660; Mature: 660

Protein sequence:

>660_residues
MMLRSRTCIVALCATSAVWCVGAAPVRAQSTVWDATISNTNWYVPTAQLLAYMSPKTGFTNPIPIGDQTLWTLGTATNGS
FTGTSVAQLRIGPALLTDTSTIQGFVTTSGQITMLFTPTGGGTVTVGLGTMRLVNGVTSMEMQMITGDTLLVTHWAYMLP
YDPATFTPPPSAPVPANSVPQWAWTAGTPWRIVSPALFGTQAPGRFVITNYQNGYFWGAGIAPAGSAAGGFTLLGSVTPE
GRVLFNTLSRGSLTSLYGTASGSASGAQMIASMYDLAGNMTGDLATMSLVQPYGDTLRAAGGRVGLEAADALYRLSMTSA
GCSGGMASGFAALDNLSGPSLGNAIKQTLPVLTGAASQATYVTQRDFRQTMTNRLDDMASMRIAAGQHVWMQPLGGTAQQ
SARDGVPGYNASGGGLAFGADAPLSPGAVIGGVAAYSRQTISGSDDAVPNRLTVSSYQLGLYGAYAVSPGLLLDYQLDGG
TSDNGESRSLGFMSATAAGSYRSYAGHVGVGVKTRIALQDKLSLIPSLRLDYGAVRSNAYRENGADGFSLNVETQRYQEL
TATAGLKAVYAIAKQVRLSGEVGVGYNALNQRLQIGAAFSGGGDSFTTNGLALSPWIYSAGLGLIAARSDRLDLSIRYGV
SATSSGLVEQSGHAVLKVRL

Sequences:

>Translated_660_residues
MMLRSRTCIVALCATSAVWCVGAAPVRAQSTVWDATISNTNWYVPTAQLLAYMSPKTGFTNPIPIGDQTLWTLGTATNGS
FTGTSVAQLRIGPALLTDTSTIQGFVTTSGQITMLFTPTGGGTVTVGLGTMRLVNGVTSMEMQMITGDTLLVTHWAYMLP
YDPATFTPPPSAPVPANSVPQWAWTAGTPWRIVSPALFGTQAPGRFVITNYQNGYFWGAGIAPAGSAAGGFTLLGSVTPE
GRVLFNTLSRGSLTSLYGTASGSASGAQMIASMYDLAGNMTGDLATMSLVQPYGDTLRAAGGRVGLEAADALYRLSMTSA
GCSGGMASGFAALDNLSGPSLGNAIKQTLPVLTGAASQATYVTQRDFRQTMTNRLDDMASMRIAAGQHVWMQPLGGTAQQ
SARDGVPGYNASGGGLAFGADAPLSPGAVIGGVAAYSRQTISGSDDAVPNRLTVSSYQLGLYGAYAVSPGLLLDYQLDGG
TSDNGESRSLGFMSATAAGSYRSYAGHVGVGVKTRIALQDKLSLIPSLRLDYGAVRSNAYRENGADGFSLNVETQRYQEL
TATAGLKAVYAIAKQVRLSGEVGVGYNALNQRLQIGAAFSGGGDSFTTNGLALSPWIYSAGLGLIAARSDRLDLSIRYGV
SATSSGLVEQSGHAVLKVRL
>Mature_660_residues
MMLRSRTCIVALCATSAVWCVGAAPVRAQSTVWDATISNTNWYVPTAQLLAYMSPKTGFTNPIPIGDQTLWTLGTATNGS
FTGTSVAQLRIGPALLTDTSTIQGFVTTSGQITMLFTPTGGGTVTVGLGTMRLVNGVTSMEMQMITGDTLLVTHWAYMLP
YDPATFTPPPSAPVPANSVPQWAWTAGTPWRIVSPALFGTQAPGRFVITNYQNGYFWGAGIAPAGSAAGGFTLLGSVTPE
GRVLFNTLSRGSLTSLYGTASGSASGAQMIASMYDLAGNMTGDLATMSLVQPYGDTLRAAGGRVGLEAADALYRLSMTSA
GCSGGMASGFAALDNLSGPSLGNAIKQTLPVLTGAASQATYVTQRDFRQTMTNRLDDMASMRIAAGQHVWMQPLGGTAQQ
SARDGVPGYNASGGGLAFGADAPLSPGAVIGGVAAYSRQTISGSDDAVPNRLTVSSYQLGLYGAYAVSPGLLLDYQLDGG
TSDNGESRSLGFMSATAAGSYRSYAGHVGVGVKTRIALQDKLSLIPSLRLDYGAVRSNAYRENGADGFSLNVETQRYQEL
TATAGLKAVYAIAKQVRLSGEVGVGYNALNQRLQIGAAFSGGGDSFTTNGLALSPWIYSAGLGLIAARSDRLDLSIRYGV
SATSSGLVEQSGHAVLKVRL

Specific function: Unknown

COG id: COG4625

COG function: function code S; Uncharacterized protein with a C-terminal OMP (outer membrane protein) domain

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 68332; Mature: 68332

Theoretical pI: Translated: 8.69; Mature: 8.69

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMLRSRTCIVALCATSAVWCVGAAPVRAQSTVWDATISNTNWYVPTAQLLAYMSPKTGFT
CCCCCCCEEEEEECCCCEEEECCCCCCCCCEEEEEEECCCEEECCHHHHHHHCCCCCCCC
NPIPIGDQTLWTLGTATNGSFTGTSVAQLRIGPALLTDTSTIQGFVTTSGQITMLFTPTG
CCCCCCCCEEEEEEECCCCCCCCCEEEEEEECCEEEECCCCEEEEEECCCEEEEEEECCC
GGTVTVGLGTMRLVNGVTSMEMQMITGDTLLVTHWAYMLPYDPATFTPPPSAPVPANSVP
CCEEEEECCHHHHHCCCCCEEEEEEECCEEEEEEEEEEECCCCCCCCCCCCCCCCCCCCC
QWAWTAGTPWRIVSPALFGTQAPGRFVITNYQNGYFWGAGIAPAGSAAGGFTLLGSVTPE
CCEECCCCCCEEECHHHHCCCCCCEEEEEECCCCEEEECCCCCCCCCCCCEEEEECCCCC
GRVLFNTLSRGSLTSLYGTASGSASGAQMIASMYDLAGNMTGDLATMSLVQPYGDTLRAA
CEEEEEECCCCCEEEEEECCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCHHHHHC
GGRVGLEAADALYRLSMTSAGCSGGMASGFAALDNLSGPSLGNAIKQTLPVLTGAASQAT
CCCCCHHHHHHHHEEEECCCCCCCCCHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCCCE
YVTQRDFRQTMTNRLDDMASMRIAAGQHVWMQPLGGTAQQSARDGVPGYNASGGGLAFGA
EHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCHHHHHHCCCCCCCCCCCCEEECC
DAPLSPGAVIGGVAAYSRQTISGSDDAVPNRLTVSSYQLGLYGAYAVSPGLLLDYQLDGG
CCCCCCCHHHHHHHHHCCCCCCCCCCCCCCEEEEEEEEECEEEEEECCCCEEEEEEECCC
TSDNGESRSLGFMSATAAGSYRSYAGHVGVGVKTRIALQDKLSLIPSLRLDYGAVRSNAY
CCCCCCCCEEEEEEECCCCCCHHCCCEECCCEEEEEEEHHHHHHCCCCCCCHHHHHCCCH
RENGADGFSLNVETQRYQELTATAGLKAVYAIAKQVRLSGEVGVGYNALNQRLQIGAAFS
HCCCCCCEEEECCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHCCEEEEEEEEC
GGGDSFTTNGLALSPWIYSAGLGLIAARSDRLDLSIRYGVSATSSGLVEQSGHAVLKVRL
CCCCCEECCCEEECCHHHHCCCCEEEECCCCEEEEEEECCCCCCCCCEECCCCEEEEEEC
>Mature Secondary Structure
MMLRSRTCIVALCATSAVWCVGAAPVRAQSTVWDATISNTNWYVPTAQLLAYMSPKTGFT
CCCCCCCEEEEEECCCCEEEECCCCCCCCCEEEEEEECCCEEECCHHHHHHHCCCCCCCC
NPIPIGDQTLWTLGTATNGSFTGTSVAQLRIGPALLTDTSTIQGFVTTSGQITMLFTPTG
CCCCCCCCEEEEEEECCCCCCCCCEEEEEEECCEEEECCCCEEEEEECCCEEEEEEECCC
GGTVTVGLGTMRLVNGVTSMEMQMITGDTLLVTHWAYMLPYDPATFTPPPSAPVPANSVP
CCEEEEECCHHHHHCCCCCEEEEEEECCEEEEEEEEEEECCCCCCCCCCCCCCCCCCCCC
QWAWTAGTPWRIVSPALFGTQAPGRFVITNYQNGYFWGAGIAPAGSAAGGFTLLGSVTPE
CCEECCCCCCEEECHHHHCCCCCCEEEEEECCCCEEEECCCCCCCCCCCCEEEEECCCCC
GRVLFNTLSRGSLTSLYGTASGSASGAQMIASMYDLAGNMTGDLATMSLVQPYGDTLRAA
CEEEEEECCCCCEEEEEECCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCHHHHHC
GGRVGLEAADALYRLSMTSAGCSGGMASGFAALDNLSGPSLGNAIKQTLPVLTGAASQAT
CCCCCHHHHHHHHEEEECCCCCCCCCHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCCCE
YVTQRDFRQTMTNRLDDMASMRIAAGQHVWMQPLGGTAQQSARDGVPGYNASGGGLAFGA
EHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCHHHHHHCCCCCCCCCCCCEEECC
DAPLSPGAVIGGVAAYSRQTISGSDDAVPNRLTVSSYQLGLYGAYAVSPGLLLDYQLDGG
CCCCCCCHHHHHHHHHCCCCCCCCCCCCCCEEEEEEEEECEEEEEECCCCEEEEEEECCC
TSDNGESRSLGFMSATAAGSYRSYAGHVGVGVKTRIALQDKLSLIPSLRLDYGAVRSNAY
CCCCCCCCEEEEEEECCCCCCHHCCCEECCCEEEEEEEHHHHHHCCCCCCCHHHHHCCCH
RENGADGFSLNVETQRYQELTATAGLKAVYAIAKQVRLSGEVGVGYNALNQRLQIGAAFS
HCCCCCCEEEECCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHCCEEEEEEEEC
GGGDSFTTNGLALSPWIYSAGLGLIAARSDRLDLSIRYGVSATSSGLVEQSGHAVLKVRL
CCCCCEECCCEEECCHHHHCCCCEEEECCCCEEEEEEECCCCCCCCCEECCCCEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA