Definition | Bradyrhizobium sp. ORS278 chromosome, complete genome. |
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Accession | NC_009445 |
Length | 7,456,587 |
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The map label for this gene is 146337187
Identifier: 146337187
GI number: 146337187
Start: 16888
End: 18294
Strand: Reverse
Name: 146337187
Synonym: BRADO0012
Alternate gene names: NA
Gene position: 18294-16888 (Counterclockwise)
Preceding gene: 146337188
Following gene: 146337185
Centisome position: 0.25
GC content: 68.94
Gene sequence:
>1407_bases ATGACTCGCCGCCTGCTGCTGCTCGTCGTTCTTGCCACCACCACGCTGACCGCTCTGGCGGTCGGCGCTGCCTGCGCCCG CGATGTCCCGGAGGTCGCGACAGGGTTCATCGCGAGCGTGGTCTGCTCGGAGACCTTCGTCTCCGGCCTCGATCCGGACC GCGTTGTGTCCGAGACCAGGGACGCCATGCCTGGGGCGGGGCTGCTCACCTGGGCCATGGATATCCGCGTCGACCGCGCA GCGCGGGACGTCAACGTGACCCTGCTCGGGCTCGGCCGCAGCCATGCGGTATTTCGCGACGGGCTCGGCTGCCATTTGGA ACATGGCGAGATCCAGGACTGGCCGACCATCCGGCCCGCTGCTCCGCAGCCCGCTTTGCTGCCCGACATCGCTCCGCCAC GCGTTCTGGAGTCGGCCACCCCGGCCCTCGCCGCGGCCCTCGATCGCGCCTTTGCCGAGCCGGCGGCGCCGCCGTTCCGG CGGACCCATGCCGTCGTGGTGCTCAAGGACGGCAAGCTGATTGCCGAACGCTATGGGCCCGGCATCACCCTCGACACGCC TTTGCTCGGGTTCTCCGCCACCAAGTCGATGATAGCGACCTTGATCGGCATTCTCGTCCGCCAGAACAAGCTGACGCTGC ATGCGCCCGCGCGCGTCGCCGCCTGGCAAAACGAGACCGACCCGCGTCATGCCATCACCGTCGATCACCTGCTGCGTCAT ACCGCCGGGCTCGCGCTCGGCAGCTCGCTGCAGGCCTCGCTGCTGTCGGCGCTCGAGCCGGTCAACCGCATGAAGTTCGT CGAAACGGATCGCGCCGCTTTCGCCGAGACCATGCCGATCGAGACGACGCCGGGCGCGGTCAGCAACTATCACGACGGCA ACACCGTCATCCTCTCGCAGCTCATCCGCGACGCCGCCGGCGGCAGCGCTGCGGATGTGCTGCGCTTCGCGCATCGCGAG CTGTTCGATCCGCTCGGCATGCGCAATGTCACGATCGAGTTCGATGCCGCCGGTACGCCGGAGGGCTCGAGCCAGATGCT GGCCTCGGCGCGCGACTGGGCGCGGCTCGGCCAGCTGTATCTCGACGACGGCGTCGTCGGCGGCCGCCGCATCCTGCCAG CCGGCTGGGCCGAGTATGTCAGCAGTCCGACGCCGGGCGCCTTCGTCGGGCTCGGCGCCGGCTTCTGGACCAATCGTGGC GACAGTTTCGGCGCCAACTATCGCGTCTCCCACGGCTGGCCACGCGATGCCTTCTTCGCCAAGGGCTCGATCGGCCAATA TGTCATCATCATTCCCTCGGAGCGCCTGGTCATCGCCCGCTTCGGCCGCACCGTGAACTGGCCGCCAGAGGCGGACGGCG TGGCGGAGCTCGTGAGCGACGTGATCGCGGCGACGCGGGGAGAATGA
Upstream 100 bases:
>100_bases GAGGTCGCTGCCAATTTCGGCGGCGGACCGTTTCAAAATCGGCGAGCCGTTTGGCCGGAGCTGCGCTCTCGTCGGGCACG TCCATCTGCCGGAGCGTCCC
Downstream 100 bases:
>100_bases CGCATGCGCTAAGCTCTCCCCAACGCGGTCGCCTGTGCGACGCGATCGAACCGCTCCAGCGACAGGATCGCATCCGCAAA GCCTTGCGCGCGAGTGCTCA
Product: putative beta-lactamase family protein 6-aminohexanoate-dimer hydrolase
Products: NA
Alternate protein names: 6-Aminohexanoate-Dimer Hydrolase; 6-Aminohexanoate-Dimer Hydrolase Protein; Hydrolase Transmembrane Protein; Beta-Lactamase Class C; Beta-Lactamase Family Protein; Beta-Lactamase Class C Family Protein; Hydrolase; Beta-Lactamase Class C Protein; Amide Hydrolase; Hydrolatse Transmembrane Protein
Number of amino acids: Translated: 468; Mature: 467
Protein sequence:
>468_residues MTRRLLLLVVLATTTLTALAVGAACARDVPEVATGFIASVVCSETFVSGLDPDRVVSETRDAMPGAGLLTWAMDIRVDRA ARDVNVTLLGLGRSHAVFRDGLGCHLEHGEIQDWPTIRPAAPQPALLPDIAPPRVLESATPALAAALDRAFAEPAAPPFR RTHAVVVLKDGKLIAERYGPGITLDTPLLGFSATKSMIATLIGILVRQNKLTLHAPARVAAWQNETDPRHAITVDHLLRH TAGLALGSSLQASLLSALEPVNRMKFVETDRAAFAETMPIETTPGAVSNYHDGNTVILSQLIRDAAGGSAADVLRFAHRE LFDPLGMRNVTIEFDAAGTPEGSSQMLASARDWARLGQLYLDDGVVGGRRILPAGWAEYVSSPTPGAFVGLGAGFWTNRG DSFGANYRVSHGWPRDAFFAKGSIGQYVIIIPSERLVIARFGRTVNWPPEADGVAELVSDVIAATRGE
Sequences:
>Translated_468_residues MTRRLLLLVVLATTTLTALAVGAACARDVPEVATGFIASVVCSETFVSGLDPDRVVSETRDAMPGAGLLTWAMDIRVDRA ARDVNVTLLGLGRSHAVFRDGLGCHLEHGEIQDWPTIRPAAPQPALLPDIAPPRVLESATPALAAALDRAFAEPAAPPFR RTHAVVVLKDGKLIAERYGPGITLDTPLLGFSATKSMIATLIGILVRQNKLTLHAPARVAAWQNETDPRHAITVDHLLRH TAGLALGSSLQASLLSALEPVNRMKFVETDRAAFAETMPIETTPGAVSNYHDGNTVILSQLIRDAAGGSAADVLRFAHRE LFDPLGMRNVTIEFDAAGTPEGSSQMLASARDWARLGQLYLDDGVVGGRRILPAGWAEYVSSPTPGAFVGLGAGFWTNRG DSFGANYRVSHGWPRDAFFAKGSIGQYVIIIPSERLVIARFGRTVNWPPEADGVAELVSDVIAATRGE >Mature_467_residues TRRLLLLVVLATTTLTALAVGAACARDVPEVATGFIASVVCSETFVSGLDPDRVVSETRDAMPGAGLLTWAMDIRVDRAA RDVNVTLLGLGRSHAVFRDGLGCHLEHGEIQDWPTIRPAAPQPALLPDIAPPRVLESATPALAAALDRAFAEPAAPPFRR THAVVVLKDGKLIAERYGPGITLDTPLLGFSATKSMIATLIGILVRQNKLTLHAPARVAAWQNETDPRHAITVDHLLRHT AGLALGSSLQASLLSALEPVNRMKFVETDRAAFAETMPIETTPGAVSNYHDGNTVILSQLIRDAAGGSAADVLRFAHREL FDPLGMRNVTIEFDAAGTPEGSSQMLASARDWARLGQLYLDDGVVGGRRILPAGWAEYVSSPTPGAFVGLGAGFWTNRGD SFGANYRVSHGWPRDAFFAKGSIGQYVIIIPSERLVIARFGRTVNWPPEADGVAELVSDVIAATRGE
Specific function: Unknown
COG id: COG1680
COG function: function code V; Beta-lactamase class C and other penicillin binding proteins
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 49904; Mature: 49772
Theoretical pI: Translated: 6.44; Mature: 6.44
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTRRLLLLVVLATTTLTALAVGAACARDVPEVATGFIASVVCSETFVSGLDPDRVVSETR CCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHH DAMPGAGLLTWAMDIRVDRAARDVNVTLLGLGRSHAVFRDGLGCHLEHGEIQDWPTIRPA HCCCCCCCEEEEEHHEECCCCCCEEEEEEECCCCCHHHHCCCCCEEECCCCCCCCCCCCC APQPALLPDIAPPRVLESATPALAAALDRAFAEPAAPPFRRTHAVVVLKDGKLIAERYGP CCCCCCCCCCCCCHHHHHCCHHHHHHHHHHHHCCCCCCCCCCEEEEEEECCCEEHHHCCC GITLDTPLLGFSATKSMIATLIGILVRQNKLTLHAPARVAAWQNETDPRHAITVDHLLRH CCEECCCCCCHHHHHHHHHHHHHHHHHCCCEEEECCCHHCCCCCCCCCCCEEEHHHHHHH TAGLALGSSLQASLLSALEPVNRMKFVETDRAAFAETMPIETTPGAVSNYHDGNTVILSQ HHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHH LIRDAAGGSAADVLRFAHRELFDPLGMRNVTIEFDAAGTPEGSSQMLASARDWARLGQLY HHHHHCCCCHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHH LDDGVVGGRRILPAGWAEYVSSPTPGAFVGLGAGFWTNRGDSFGANYRVSHGWPRDAFFA CCCCCCCCCEECCCCHHHHHCCCCCCCEEECCCCCCCCCCCCCCCCEEECCCCCCCCEEE KGSIGQYVIIIPSERLVIARFGRTVNWPPEADGVAELVSDVIAATRGE CCCCCCEEEEECCCCEEEEECCCCCCCCCCCCHHHHHHHHHHHHCCCC >Mature Secondary Structure TRRLLLLVVLATTTLTALAVGAACARDVPEVATGFIASVVCSETFVSGLDPDRVVSETR CHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHH DAMPGAGLLTWAMDIRVDRAARDVNVTLLGLGRSHAVFRDGLGCHLEHGEIQDWPTIRPA HCCCCCCCEEEEEHHEECCCCCCEEEEEEECCCCCHHHHCCCCCEEECCCCCCCCCCCCC APQPALLPDIAPPRVLESATPALAAALDRAFAEPAAPPFRRTHAVVVLKDGKLIAERYGP CCCCCCCCCCCCCHHHHHCCHHHHHHHHHHHHCCCCCCCCCCEEEEEEECCCEEHHHCCC GITLDTPLLGFSATKSMIATLIGILVRQNKLTLHAPARVAAWQNETDPRHAITVDHLLRH CCEECCCCCCHHHHHHHHHHHHHHHHHCCCEEEECCCHHCCCCCCCCCCCEEEHHHHHHH TAGLALGSSLQASLLSALEPVNRMKFVETDRAAFAETMPIETTPGAVSNYHDGNTVILSQ HHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHH LIRDAAGGSAADVLRFAHRELFDPLGMRNVTIEFDAAGTPEGSSQMLASARDWARLGQLY HHHHHCCCCHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHH LDDGVVGGRRILPAGWAEYVSSPTPGAFVGLGAGFWTNRGDSFGANYRVSHGWPRDAFFA CCCCCCCCCEECCCCHHHHHCCCCCCCEEECCCCCCCCCCCCCCCCEEECCCCCCCCEEE KGSIGQYVIIIPSERLVIARFGRTVNWPPEADGVAELVSDVIAATRGE CCCCCCEEEEECCCCEEEEECCCCCCCCCCCCHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA