Definition | Bradyrhizobium sp. ORS278 chromosome, complete genome. |
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Accession | NC_009445 |
Length | 7,456,587 |
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The map label for this gene is 146337185
Identifier: 146337185
GI number: 146337185
Start: 14255
End: 15397
Strand: Reverse
Name: 146337185
Synonym: BRADO0010
Alternate gene names: NA
Gene position: 15397-14255 (Counterclockwise)
Preceding gene: 146337187
Following gene: 146337183
Centisome position: 0.21
GC content: 71.3
Gene sequence:
>1143_bases ATGGCATCGTTGAAGGAGCTGTTCGGCCGGGTGCGCGCGCGCAAGGCGCAGATGTCGCTGGCCGTCCGCGGCACGGTGGC GGCAACGCTGGCCTTCGCCATCGCAACCGCCTTCCAGCTCAAGCTGCCGCTGTGGGCGGTGCTGACCTCGCTGATCGTGA CGCAAGGCAGCGTTGGGCGTTCGCTGAAGGCGACGCGGGACTACATGTTCGGCACCATCGGTGGCGCGATCTATGGCGGC GCCATCACGGTGTTCATTCCGCATTCCGGCGAACTGCAGCTGCTCGGCATGCTGATCCTGGCGGTGACGCCGCTCGCCTT CATCGCCGCGGTCAATCCGAGCCTGAATGCCGCCACGGTGACTGCGGTCATCGTGCTGCTGGTGCCGACGATGGGCCATC TCGATCCGCTGGGCTCGGCGATCGACCGCGTGTTCGAGGTCGCGGTCGGCGCGCTCACCGGTCTTGCGGTCTCGTTCGTC GTGCTGCCGTCGCGCGCGCATGCGCAGATGCGCAGCGCCGCGGGGCGCCTGCTGGAGCTGATCGCGGCCGCTTTCACCGA GCTGTTGGCCGGCCTGTCGCACGGCCGCGACAACGACGCGCTGCACCGGATCCAGGACGGCATCGGCGCGGCGCTCACCG AATTGAATGCGACCGGCGCCGAGGCCGAGCGCGAGCGCTCGGCGCGACTGTCGTCGGGCGCCGACACCGGCCCGATGCTG CGCACGATCCTGCGGCTGCGCCACGACGTCGTGATGATCGGCCGCGCCAGTGTGGTGCCGCTGCCGTCCGAGCTGCAGGC GCGGCTGTCGGGGCCGGTCACCCGCGTCAGCGACGCCATCGCCGGCTATCTGCGCGGCTGCGCGGGCGCCATCCGCAACG GCTCGGGCCCGCCGGCGATCTGGCCGGTGCATGTCGCCGTCAAGGCCTATGCCGAGGCCGTCGCCGCCGTGCGCAGCGAC GGCCTGACGCGCGGCCTGCCGGGGGATGCGGCCGAGCGCTTCTTCGCGCTCGGATTCTCGCTCGACCAGATGCGGCAGAA CCTGATCGATCTCGAGCGTGTGGTCGCGGAATGGGCCGGCGCCTCGAGCGGCAAGCCGCATCGGCCGGAGCCGGAGGAGA CGTCGGACACGGCCGGGGCCTGA
Upstream 100 bases:
>100_bases GCATTGTTGCGGGCAGCGTAGGCAGACTGATTCCGCCTTTCAAGCCGGTCAGCCCCGGTGGGAGGCTGCCATGCGCTGGT CCGTTCGAGGTGGGTGATCG
Downstream 100 bases:
>100_bases GCTCATCGCGACAGCCTGAGAAAGCGCAGCACCAGCAGCGCCGCGTAGAGGCCGGTGCCGATCGACAGCCCGATCCAGAT CCCGATCGCGCCGAAGGCGG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 380; Mature: 379
Protein sequence:
>380_residues MASLKELFGRVRARKAQMSLAVRGTVAATLAFAIATAFQLKLPLWAVLTSLIVTQGSVGRSLKATRDYMFGTIGGAIYGG AITVFIPHSGELQLLGMLILAVTPLAFIAAVNPSLNAATVTAVIVLLVPTMGHLDPLGSAIDRVFEVAVGALTGLAVSFV VLPSRAHAQMRSAAGRLLELIAAAFTELLAGLSHGRDNDALHRIQDGIGAALTELNATGAEAERERSARLSSGADTGPML RTILRLRHDVVMIGRASVVPLPSELQARLSGPVTRVSDAIAGYLRGCAGAIRNGSGPPAIWPVHVAVKAYAEAVAAVRSD GLTRGLPGDAAERFFALGFSLDQMRQNLIDLERVVAEWAGASSGKPHRPEPEETSDTAGA
Sequences:
>Translated_380_residues MASLKELFGRVRARKAQMSLAVRGTVAATLAFAIATAFQLKLPLWAVLTSLIVTQGSVGRSLKATRDYMFGTIGGAIYGG AITVFIPHSGELQLLGMLILAVTPLAFIAAVNPSLNAATVTAVIVLLVPTMGHLDPLGSAIDRVFEVAVGALTGLAVSFV VLPSRAHAQMRSAAGRLLELIAAAFTELLAGLSHGRDNDALHRIQDGIGAALTELNATGAEAERERSARLSSGADTGPML RTILRLRHDVVMIGRASVVPLPSELQARLSGPVTRVSDAIAGYLRGCAGAIRNGSGPPAIWPVHVAVKAYAEAVAAVRSD GLTRGLPGDAAERFFALGFSLDQMRQNLIDLERVVAEWAGASSGKPHRPEPEETSDTAGA >Mature_379_residues ASLKELFGRVRARKAQMSLAVRGTVAATLAFAIATAFQLKLPLWAVLTSLIVTQGSVGRSLKATRDYMFGTIGGAIYGGA ITVFIPHSGELQLLGMLILAVTPLAFIAAVNPSLNAATVTAVIVLLVPTMGHLDPLGSAIDRVFEVAVGALTGLAVSFVV LPSRAHAQMRSAAGRLLELIAAAFTELLAGLSHGRDNDALHRIQDGIGAALTELNATGAEAERERSARLSSGADTGPMLR TILRLRHDVVMIGRASVVPLPSELQARLSGPVTRVSDAIAGYLRGCAGAIRNGSGPPAIWPVHVAVKAYAEAVAAVRSDG LTRGLPGDAAERFFALGFSLDQMRQNLIDLERVVAEWAGASSGKPHRPEPEETSDTAGA
Specific function: Unknown
COG id: COG1289
COG function: function code S; Predicted membrane protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 39627; Mature: 39496
Theoretical pI: Translated: 9.85; Mature: 9.85
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MASLKELFGRVRARKAQMSLAVRGTVAATLAFAIATAFQLKLPLWAVLTSLIVTQGSVGR CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCC SLKATRDYMFGTIGGAIYGGAITVFIPHSGELQLLGMLILAVTPLAFIAAVNPSLNAATV HHHHHHHHHHHHHHHHHCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHH TAVIVLLVPTMGHLDPLGSAIDRVFEVAVGALTGLAVSFVVLPSRAHAQMRSAAGRLLEL HHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH IAAAFTELLAGLSHGRDNDALHRIQDGIGAALTELNATGAEAERERSARLSSGADTGPML HHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCCHHH RTILRLRHDVVMIGRASVVPLPSELQARLSGPVTRVSDAIAGYLRGCAGAIRNGSGPPAI HHHHHHHHCEEEECCCCCCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCE WPVHVAVKAYAEAVAAVRSDGLTRGLPGDAAERFFALGFSLDQMRQNLIDLERVVAEWAG EHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCC ASSGKPHRPEPEETSDTAGA CCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure ASLKELFGRVRARKAQMSLAVRGTVAATLAFAIATAFQLKLPLWAVLTSLIVTQGSVGR CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCC SLKATRDYMFGTIGGAIYGGAITVFIPHSGELQLLGMLILAVTPLAFIAAVNPSLNAATV HHHHHHHHHHHHHHHHHCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHH TAVIVLLVPTMGHLDPLGSAIDRVFEVAVGALTGLAVSFVVLPSRAHAQMRSAAGRLLEL HHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH IAAAFTELLAGLSHGRDNDALHRIQDGIGAALTELNATGAEAERERSARLSSGADTGPML HHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCCHHH RTILRLRHDVVMIGRASVVPLPSELQARLSGPVTRVSDAIAGYLRGCAGAIRNGSGPPAI HHHHHHHHCEEEECCCCCCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCE WPVHVAVKAYAEAVAAVRSDGLTRGLPGDAAERFFALGFSLDQMRQNLIDLERVVAEWAG EHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCC ASSGKPHRPEPEETSDTAGA CCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA