Definition Flavobacterium johnsoniae UW101 chromosome, complete genome.
Accession NC_009441
Length 6,096,872

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The map label for this gene is 146301620

Identifier: 146301620

GI number: 146301620

Start: 4622382

End: 4624322

Strand: Reverse

Name: 146301620

Synonym: Fjoh_3881

Alternate gene names: NA

Gene position: 4624322-4622382 (Counterclockwise)

Preceding gene: 146301621

Following gene: 146301619

Centisome position: 75.85

GC content: 39.41

Gene sequence:

>1941_bases
ATGAAACGATATATTTTTAGAAATTTAATAATAGGATCTGTAGTTTTATACTCCTTTGCCAGCTGTACTGATATTCTGGA
AGAAAAGCCGCATGATTTTTATGAACCGGGTTATTTTAAAACAGAACAGGGAGTAATACAAGGATTAACCTCTCATTATG
CACACCTTCGTTATATTTACGGACAGGCTTATTTTTATAATGCTACACAAACAGGTACAGATGAAGCAACGTATGCGCAG
AGTGCAGACGGAAATTTTAAAGATCATGATTTATCGGGAGTTGGTGTAATTAACCCTAATTCAAGCCGTTCAGATGTTTT
ATGGAACAATTCATACAATGATATCAACACGGCCAGCGGTATAATCGAGAACGGAGCTGCTGTAGGAGTTTCAAGCAGTC
TTATTGCCGAGTCAAAATTTTTCAGGGCTTTCGATTATTTCTTATTGGTTCAGACTTTTGGAGGTGTGCCATTAGATTTA
GGAGCTGGAGAATTGAAATTTAACAGTAAACCTTCGAGATCTTCAAAACGTAATACAGTTCCAGAAGTTTATACAAAAGC
TGTTTTTCCAGATTTAAAAGCAGCAGTTGCTGAACTGCCGGATGCTGCCCGATTAACAGGTACTGCAACCAAAACATTAG
CTCGTTTAATATTGGCAAAAGCGTATTTGACTTATGCATGGTGGCTGGAAAATCCAAATAATATTCCAACTTATCCTGAA
GCACCGCGTACAGATCCTGACGGACATAATGCACAATGGTATTTTCAGCAGGCTTATGATTTAGCCGTAGAAGGAATTAA
TAATCCTGGTCCTTATGCCTTACTGGATTCTTTTTATGATGTAAACGCAGGTCCAAATGACAGAAACAAAGAAGTAATGT
TATATGCAGATCATACTGAATCAAGCGAATATTACAATGGAGGAAGTCTTACTTACGGAAGCGGCGGAGCTCCTGATAAC
TTCGCAGGCTGGATGGTAACCTGGAATTACACTTCTATTAGAAGTAAAAACGGAAGCGCTTCGGTTTCTTCTGTTCAGCG
TGAAGCCAATCAGTTTTTAGGACGTCCATGGACAAGAATGGCGCCTCCAATTGAAGTTTTTACCAAAACTTTTGCAGATA
AAACAAATGATTCAAGATATGACGGAACTTTTGCAGCAGTTTACCGCGGTAACTGGAATTTGCAGGGAACAGGTCTTACA
ACTGTGCCGACTTTAACCAATGCAAACGGATTAACGATTAAACCTGGCGACGCTGTATTAACTTTTTTAAATGATGAACC
ATTAACACCAATTACTTATCCTTCTGGACAAGGAGACAGCGGTGTTGGAGCAGGAATTTTACCGGGAAGAGCAGATTATG
TTATTTCTCCAAACGGAATAAGCAGAATTGTATATCCAGGTTTCTGGAAATTAGGACCATATCGTACCGATAATGCGGGC
GGATTAGGACAACCTAATGCTGCAAGTACAAGACCTTACCCTGTAGCAAAATTCTCTGAGTTGTATCTGGTTGCGGCAGA
AGCTGCTGTTAAAGGTGCAACAGGAACACTAAGTGCAAGAACTCTTGTAAATGTGATAAGAGCAAGAGCAGGAAAATGGC
GCTGGGATAATAACGGAAATACAGCAAAAATAGCAGACAACAGTGCGGCTATGACTACTGCAACCCCGGCAATAATTGAT
ATTAATTACATTTTAGCGGAACGTTCACGTGAGTTTTTTGGAGAAGGATACCGCTGGTATGATTTAGTAAGAACTCAAAA
ATGGAATGAGATTGCAGGAAAATATTCAATTGGCGGATCTAACTATGGTCAGCATACACCTGAAGTTGTAACCAGAACTA
TTGATGCACATCATTATTTAAGACCAATTCCTCAAGGACAGCTAGATGGTATGGAAATGAGTGCAGATGAAAAAGCTAAA
TATCAAAATCCGGGTTACTAG

Upstream 100 bases:

>100_bases
ATCCTCTTACCAAAGAAGATTTTTGGTTATTGGTACTAATACCCCTAGTACCCGAAATTATTTATTTGGACTTAACTTAA
CATTTTAATCAAGAAGAACT

Downstream 100 bases:

>100_bases
ATTAACTTTTTAAACAAATTTAGATCCTATTTATAAGAGTTGATTTTACGGTTACTTTTTGATGATCTTAAGTTTGTAAG
TTGAAAGCCGAGGGCATTTT

Product: RagB/SusD domain-containing protein

Products: NA

Alternate protein names: RagB/SusD Domain-Containing Protein; Outer Membrane Protein; Ragb/Susd Domain Protein; Lipoprotein; RagB/SusD Family Protein

Number of amino acids: Translated: 646; Mature: 646

Protein sequence:

>646_residues
MKRYIFRNLIIGSVVLYSFASCTDILEEKPHDFYEPGYFKTEQGVIQGLTSHYAHLRYIYGQAYFYNATQTGTDEATYAQ
SADGNFKDHDLSGVGVINPNSSRSDVLWNNSYNDINTASGIIENGAAVGVSSSLIAESKFFRAFDYFLLVQTFGGVPLDL
GAGELKFNSKPSRSSKRNTVPEVYTKAVFPDLKAAVAELPDAARLTGTATKTLARLILAKAYLTYAWWLENPNNIPTYPE
APRTDPDGHNAQWYFQQAYDLAVEGINNPGPYALLDSFYDVNAGPNDRNKEVMLYADHTESSEYYNGGSLTYGSGGAPDN
FAGWMVTWNYTSIRSKNGSASVSSVQREANQFLGRPWTRMAPPIEVFTKTFADKTNDSRYDGTFAAVYRGNWNLQGTGLT
TVPTLTNANGLTIKPGDAVLTFLNDEPLTPITYPSGQGDSGVGAGILPGRADYVISPNGISRIVYPGFWKLGPYRTDNAG
GLGQPNAASTRPYPVAKFSELYLVAAEAAVKGATGTLSARTLVNVIRARAGKWRWDNNGNTAKIADNSAAMTTATPAIID
INYILAERSREFFGEGYRWYDLVRTQKWNEIAGKYSIGGSNYGQHTPEVVTRTIDAHHYLRPIPQGQLDGMEMSADEKAK
YQNPGY

Sequences:

>Translated_646_residues
MKRYIFRNLIIGSVVLYSFASCTDILEEKPHDFYEPGYFKTEQGVIQGLTSHYAHLRYIYGQAYFYNATQTGTDEATYAQ
SADGNFKDHDLSGVGVINPNSSRSDVLWNNSYNDINTASGIIENGAAVGVSSSLIAESKFFRAFDYFLLVQTFGGVPLDL
GAGELKFNSKPSRSSKRNTVPEVYTKAVFPDLKAAVAELPDAARLTGTATKTLARLILAKAYLTYAWWLENPNNIPTYPE
APRTDPDGHNAQWYFQQAYDLAVEGINNPGPYALLDSFYDVNAGPNDRNKEVMLYADHTESSEYYNGGSLTYGSGGAPDN
FAGWMVTWNYTSIRSKNGSASVSSVQREANQFLGRPWTRMAPPIEVFTKTFADKTNDSRYDGTFAAVYRGNWNLQGTGLT
TVPTLTNANGLTIKPGDAVLTFLNDEPLTPITYPSGQGDSGVGAGILPGRADYVISPNGISRIVYPGFWKLGPYRTDNAG
GLGQPNAASTRPYPVAKFSELYLVAAEAAVKGATGTLSARTLVNVIRARAGKWRWDNNGNTAKIADNSAAMTTATPAIID
INYILAERSREFFGEGYRWYDLVRTQKWNEIAGKYSIGGSNYGQHTPEVVTRTIDAHHYLRPIPQGQLDGMEMSADEKAK
YQNPGY
>Mature_646_residues
MKRYIFRNLIIGSVVLYSFASCTDILEEKPHDFYEPGYFKTEQGVIQGLTSHYAHLRYIYGQAYFYNATQTGTDEATYAQ
SADGNFKDHDLSGVGVINPNSSRSDVLWNNSYNDINTASGIIENGAAVGVSSSLIAESKFFRAFDYFLLVQTFGGVPLDL
GAGELKFNSKPSRSSKRNTVPEVYTKAVFPDLKAAVAELPDAARLTGTATKTLARLILAKAYLTYAWWLENPNNIPTYPE
APRTDPDGHNAQWYFQQAYDLAVEGINNPGPYALLDSFYDVNAGPNDRNKEVMLYADHTESSEYYNGGSLTYGSGGAPDN
FAGWMVTWNYTSIRSKNGSASVSSVQREANQFLGRPWTRMAPPIEVFTKTFADKTNDSRYDGTFAAVYRGNWNLQGTGLT
TVPTLTNANGLTIKPGDAVLTFLNDEPLTPITYPSGQGDSGVGAGILPGRADYVISPNGISRIVYPGFWKLGPYRTDNAG
GLGQPNAASTRPYPVAKFSELYLVAAEAAVKGATGTLSARTLVNVIRARAGKWRWDNNGNTAKIADNSAAMTTATPAIID
INYILAERSREFFGEGYRWYDLVRTQKWNEIAGKYSIGGSNYGQHTPEVVTRTIDAHHYLRPIPQGQLDGMEMSADEKAK
YQNPGY

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 70926; Mature: 70926

Theoretical pI: Translated: 6.27; Mature: 6.27

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
1.2 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
1.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKRYIFRNLIIGSVVLYSFASCTDILEEKPHDFYEPGYFKTEQGVIQGLTSHYAHLRYIY
CCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEECHHHHHHHHHHHHHHEEEEE
GQAYFYNATQTGTDEATYAQSADGNFKDHDLSGVGVINPNSSRSDVLWNNSYNDINTASG
EEEEEEECCCCCCCCHHCCCCCCCCCCCCCCCEEEEECCCCCCCCEEECCCCCCCCHHHH
IIENGAAVGVSSSLIAESKFFRAFDYFLLVQTFGGVPLDLGAGELKFNSKPSRSSKRNTV
HHCCCCEECCCHHHHHHHHHHHHHHHHHHHHHHCCCEEECCCCCEEECCCCCCCCCCCCC
PEVYTKAVFPDLKAAVAELPDAARLTGTATKTLARLILAKAYLTYAWWLENPNNIPTYPE
HHHHHHHHCHHHHHHHHHCCCCHHHCCHHHHHHHHHHHHHHHHHEEEEECCCCCCCCCCC
APRTDPDGHNAQWYFQQAYDLAVEGINNPGPYALLDSFYDVNAGPNDRNKEVMLYADHTE
CCCCCCCCCCCEEEEHHHHHHHHHCCCCCCCHHHHHHCEECCCCCCCCCCEEEEEECCCC
SSEYYNGGSLTYGSGGAPDNFAGWMVTWNYTSIRSKNGSASVSSVQREANQFLGRPWTRM
CCCEECCCEEECCCCCCCCCCCCEEEEEEEHEEECCCCCCHHHHHHHHHHHHHCCCHHHC
APPIEVFTKTFADKTNDSRYDGTFAAVYRGNWNLQGTGLTTVPTLTNANGLTIKPGDAVL
CCCHHHHHHHHHCCCCCCCCCCEEEEEEECCCEEECCCCEECCCEECCCCCEECCCCEEE
TFLNDEPLTPITYPSGQGDSGVGAGILPGRADYVISPNGISRIVYPGFWKLGPYRTDNAG
EEECCCCCCCEECCCCCCCCCCCCCCCCCCCCEEECCCCCCEEECCCEECCCCCCCCCCC
GLGQPNAASTRPYPVAKFSELYLVAAEAAVKGATGTLSARTLVNVIRARAGKWRWDNNGN
CCCCCCCCCCCCCCCHHHHHEEEEEEHHHHCCCCCCHHHHHHHHHHHHHCCCCEECCCCC
TAKIADNSAAMTTATPAIIDINYILAERSREFFGEGYRWYDLVRTQKWNEIAGKYSIGGS
EEEEECCCCEEEECCCEEEEEHHHHHHHHHHHHHCCCEEEHHHHHCCHHHHCCEEECCCC
NYGQHTPEVVTRTIDAHHYLRPIPQGQLDGMEMSADEKAKYQNPGY
CCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHCCCCCCC
>Mature Secondary Structure
MKRYIFRNLIIGSVVLYSFASCTDILEEKPHDFYEPGYFKTEQGVIQGLTSHYAHLRYIY
CCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEECHHHHHHHHHHHHHHEEEEE
GQAYFYNATQTGTDEATYAQSADGNFKDHDLSGVGVINPNSSRSDVLWNNSYNDINTASG
EEEEEEECCCCCCCCHHCCCCCCCCCCCCCCCEEEEECCCCCCCCEEECCCCCCCCHHHH
IIENGAAVGVSSSLIAESKFFRAFDYFLLVQTFGGVPLDLGAGELKFNSKPSRSSKRNTV
HHCCCCEECCCHHHHHHHHHHHHHHHHHHHHHHCCCEEECCCCCEEECCCCCCCCCCCCC
PEVYTKAVFPDLKAAVAELPDAARLTGTATKTLARLILAKAYLTYAWWLENPNNIPTYPE
HHHHHHHHCHHHHHHHHHCCCCHHHCCHHHHHHHHHHHHHHHHHEEEEECCCCCCCCCCC
APRTDPDGHNAQWYFQQAYDLAVEGINNPGPYALLDSFYDVNAGPNDRNKEVMLYADHTE
CCCCCCCCCCCEEEEHHHHHHHHHCCCCCCCHHHHHHCEECCCCCCCCCCEEEEEECCCC
SSEYYNGGSLTYGSGGAPDNFAGWMVTWNYTSIRSKNGSASVSSVQREANQFLGRPWTRM
CCCEECCCEEECCCCCCCCCCCCEEEEEEEHEEECCCCCCHHHHHHHHHHHHHCCCHHHC
APPIEVFTKTFADKTNDSRYDGTFAAVYRGNWNLQGTGLTTVPTLTNANGLTIKPGDAVL
CCCHHHHHHHHHCCCCCCCCCCEEEEEEECCCEEECCCCEECCCEECCCCCEECCCCEEE
TFLNDEPLTPITYPSGQGDSGVGAGILPGRADYVISPNGISRIVYPGFWKLGPYRTDNAG
EEECCCCCCCEECCCCCCCCCCCCCCCCCCCCEEECCCCCCEEECCCEECCCCCCCCCCC
GLGQPNAASTRPYPVAKFSELYLVAAEAAVKGATGTLSARTLVNVIRARAGKWRWDNNGN
CCCCCCCCCCCCCCCHHHHHEEEEEEHHHHCCCCCCHHHHHHHHHHHHHCCCCEECCCCC
TAKIADNSAAMTTATPAIIDINYILAERSREFFGEGYRWYDLVRTQKWNEIAGKYSIGGS
EEEEECCCCEEEECCCEEEEEHHHHHHHHHHHHHCCCEEEHHHHHCCHHHHCCEEECCCC
NYGQHTPEVVTRTIDAHHYLRPIPQGQLDGMEMSADEKAKYQNPGY
CCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA