Definition Flavobacterium johnsoniae UW101 chromosome, complete genome.
Accession NC_009441
Length 6,096,872

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The map label for this gene is 146301604

Identifier: 146301604

GI number: 146301604

Start: 4589165

End: 4590268

Strand: Direct

Name: 146301604

Synonym: Fjoh_3865

Alternate gene names: NA

Gene position: 4589165-4590268 (Clockwise)

Preceding gene: 146301603

Following gene: 146301605

Centisome position: 75.27

GC content: 36.87

Gene sequence:

>1104_bases
ATGATCAATAAAATAAAATATAGAATTCTGATTCTTTTGGCTCTGGCTTCTTTTACAGCCTGCCAGAATGACGATGCGGT
TACTGCAAACGTAGAAGCTATGGTTGCTGAACCCGGAGATTTACTTAATCAGGCGTTCCCTCAAAACAAAGTCAGAGTTG
AAGGCAATGGTTTGCAGGGATTAAAAAAAATTACGCTGGATAATACTATTAACATCACTTTCAATCCCAACTATAATTCA
GATAAATCGTTTATTTTCACTATTCCTTTTGATGAAAAATTAGGAAGCAGATTTGGTGTTCAGCCCATTACATTTACAAC
CGCATCTGGTTCGGTAACTAAGAATATTGAAATTTTACAGCCTGATCCAACAATTACAAAAATAATTCCGGCAGTAGCAA
CTCCGGGATTTCCATTGGAAATTGAAGGAACATGGTTTTATAATATTTCATCAGTAACCTTAGGCGGAAAAGCGGTAAGT
TATACTGTAAAATCATCTTCTTCTATTGTTATTGGTTTGCCTGCAAATGCCGTTTCAGGATCAGAACTTGCTATTACTAC
ACCGGGTGGTACTGCAAAGAAAACAATCGACTTTGCAACGATCGTGTTGGTATCTGATTTTGACGGAAATGGAGCCAGAA
CAGAATGGACTTCTTACGGCGATATAGAAAGTTTTAATACCGCTTCAACAGGCGGTCCAACAGGAAATTACACTACGTTA
GCCTGGGGCGGTTCAAATGCAAATGGTTATAACGGAAGCAGTGGCGGCGGCGGAGCCAGTTTCTTAAGTGCTTCTAATAC
AGATGCTACAAAAGCTTTTATCGATATTGATGTAAGTGCAAATGTTGTTGGGGCTAATTTTGCAATCCAGTTAAATACTA
TCGACGGCGTAAATTATGGATATAATTTTAAAATAACCGATGTAAACTGGTCTACAAAAACCATTTCAATTGCTGATTTT
AAAGATAATTACGGATTTGGATCTAATACAGCTGCAACTTTAAACCCTTCTAAAATTAACGAAATTAAAGTTGGAGTGGC
TCAGGGAGATTCACCTAATCCAAGTGCCATTAAATTTGATAATATTAAAATTCGTTATCAATAA

Upstream 100 bases:

>100_bases
GAAGCAATTATTTTGAACTGCCATTACCACAGTCTGCTATTGATACTAATCCATCATTATTAGAACCTCCGGTTCCATTT
AACTTTAACTAACTTATACC

Downstream 100 bases:

>100_bases
TTTCTCTTAAATTAAAAAGAGGCTGTGGTCAAAACAGCCTCTTTTATAAAGTAAACTATATAACCCCATTGGTATAATTA
TGTTAACACATAGAAACATA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 367; Mature: 367

Protein sequence:

>367_residues
MINKIKYRILILLALASFTACQNDDAVTANVEAMVAEPGDLLNQAFPQNKVRVEGNGLQGLKKITLDNTINITFNPNYNS
DKSFIFTIPFDEKLGSRFGVQPITFTTASGSVTKNIEILQPDPTITKIIPAVATPGFPLEIEGTWFYNISSVTLGGKAVS
YTVKSSSSIVIGLPANAVSGSELAITTPGGTAKKTIDFATIVLVSDFDGNGARTEWTSYGDIESFNTASTGGPTGNYTTL
AWGGSNANGYNGSSGGGGASFLSASNTDATKAFIDIDVSANVVGANFAIQLNTIDGVNYGYNFKITDVNWSTKTISIADF
KDNYGFGSNTAATLNPSKINEIKVGVAQGDSPNPSAIKFDNIKIRYQ

Sequences:

>Translated_367_residues
MINKIKYRILILLALASFTACQNDDAVTANVEAMVAEPGDLLNQAFPQNKVRVEGNGLQGLKKITLDNTINITFNPNYNS
DKSFIFTIPFDEKLGSRFGVQPITFTTASGSVTKNIEILQPDPTITKIIPAVATPGFPLEIEGTWFYNISSVTLGGKAVS
YTVKSSSSIVIGLPANAVSGSELAITTPGGTAKKTIDFATIVLVSDFDGNGARTEWTSYGDIESFNTASTGGPTGNYTTL
AWGGSNANGYNGSSGGGGASFLSASNTDATKAFIDIDVSANVVGANFAIQLNTIDGVNYGYNFKITDVNWSTKTISIADF
KDNYGFGSNTAATLNPSKINEIKVGVAQGDSPNPSAIKFDNIKIRYQ
>Mature_367_residues
MINKIKYRILILLALASFTACQNDDAVTANVEAMVAEPGDLLNQAFPQNKVRVEGNGLQGLKKITLDNTINITFNPNYNS
DKSFIFTIPFDEKLGSRFGVQPITFTTASGSVTKNIEILQPDPTITKIIPAVATPGFPLEIEGTWFYNISSVTLGGKAVS
YTVKSSSSIVIGLPANAVSGSELAITTPGGTAKKTIDFATIVLVSDFDGNGARTEWTSYGDIESFNTASTGGPTGNYTTL
AWGGSNANGYNGSSGGGGASFLSASNTDATKAFIDIDVSANVVGANFAIQLNTIDGVNYGYNFKITDVNWSTKTISIADF
KDNYGFGSNTAATLNPSKINEIKVGVAQGDSPNPSAIKFDNIKIRYQ

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 38765; Mature: 38765

Theoretical pI: Translated: 4.70; Mature: 4.70

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
0.5 %Met     (Translated Protein)
0.8 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
0.5 %Met     (Mature Protein)
0.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MINKIKYRILILLALASFTACQNDDAVTANVEAMVAEPGDLLNQAFPQNKVRVEGNGLQG
CCCCHHHHHHHHHHHHHHHCCCCCCCEEEEEEEEEECCHHHHHHHCCCCEEEEECCCCCC
LKKITLDNTINITFNPNYNSDKSFIFTIPFDEKLGSRFGVQPITFTTASGSVTKNIEILQ
EEEEEECCEEEEEECCCCCCCCEEEEEECCHHHHCCCCCCCEEEEEECCCCEECCEEEEC
PDPTITKIIPAVATPGFPLEIEGTWFYNISSVTLGGKAVSYTVKSSSSIVIGLPANAVSG
CCCCHHHHHHHHCCCCCCEEECCEEEEEEEEEEECCEEEEEEEECCCEEEEECCCCCCCC
SELAITTPGGTAKKTIDFATIVLVSDFDGNGARTEWTSYGDIESFNTASTGGPTGNYTTL
CEEEEECCCCCCCEEEEEEEEEEEECCCCCCCEEEECCCCCCCCCCCCCCCCCCCCEEEE
AWGGSNANGYNGSSGGGGASFLSASNTDATKAFIDIDVSANVVGANFAIQLNTIDGVNYG
EECCCCCCCCCCCCCCCCEEEEECCCCCCEEEEEEEEECCEEEECEEEEEEEEECCCCCC
YNFKITDVNWSTKTISIADFKDNYGFGSNTAATLNPSKINEIKVGVAQGDSPNPSAIKFD
CEEEEEECCCCCEEEEEEECCCCCCCCCCCEEEECCCCCCEEEEEEECCCCCCCCEEEEE
NIKIRYQ
EEEEEEC
>Mature Secondary Structure
MINKIKYRILILLALASFTACQNDDAVTANVEAMVAEPGDLLNQAFPQNKVRVEGNGLQG
CCCCHHHHHHHHHHHHHHHCCCCCCCEEEEEEEEEECCHHHHHHHCCCCEEEEECCCCCC
LKKITLDNTINITFNPNYNSDKSFIFTIPFDEKLGSRFGVQPITFTTASGSVTKNIEILQ
EEEEEECCEEEEEECCCCCCCCEEEEEECCHHHHCCCCCCCEEEEEECCCCEECCEEEEC
PDPTITKIIPAVATPGFPLEIEGTWFYNISSVTLGGKAVSYTVKSSSSIVIGLPANAVSG
CCCCHHHHHHHHCCCCCCEEECCEEEEEEEEEEECCEEEEEEEECCCEEEEECCCCCCCC
SELAITTPGGTAKKTIDFATIVLVSDFDGNGARTEWTSYGDIESFNTASTGGPTGNYTTL
CEEEEECCCCCCCEEEEEEEEEEEECCCCCCCEEEECCCCCCCCCCCCCCCCCCCCEEEE
AWGGSNANGYNGSSGGGGASFLSASNTDATKAFIDIDVSANVVGANFAIQLNTIDGVNYG
EECCCCCCCCCCCCCCCCEEEEECCCCCCEEEEEEEEECCEEEECEEEEEEEEECCCCCC
YNFKITDVNWSTKTISIADFKDNYGFGSNTAATLNPSKINEIKVGVAQGDSPNPSAIKFD
CEEEEEECCCCCEEEEEEECCCCCCCCCCCEEEECCCCCCEEEEEEECCCCCCCCEEEEE
NIKIRYQ
EEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA