| Definition | Flavobacterium johnsoniae UW101 chromosome, complete genome. |
|---|---|
| Accession | NC_009441 |
| Length | 6,096,872 |
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The map label for this gene is 146301604
Identifier: 146301604
GI number: 146301604
Start: 4589165
End: 4590268
Strand: Direct
Name: 146301604
Synonym: Fjoh_3865
Alternate gene names: NA
Gene position: 4589165-4590268 (Clockwise)
Preceding gene: 146301603
Following gene: 146301605
Centisome position: 75.27
GC content: 36.87
Gene sequence:
>1104_bases ATGATCAATAAAATAAAATATAGAATTCTGATTCTTTTGGCTCTGGCTTCTTTTACAGCCTGCCAGAATGACGATGCGGT TACTGCAAACGTAGAAGCTATGGTTGCTGAACCCGGAGATTTACTTAATCAGGCGTTCCCTCAAAACAAAGTCAGAGTTG AAGGCAATGGTTTGCAGGGATTAAAAAAAATTACGCTGGATAATACTATTAACATCACTTTCAATCCCAACTATAATTCA GATAAATCGTTTATTTTCACTATTCCTTTTGATGAAAAATTAGGAAGCAGATTTGGTGTTCAGCCCATTACATTTACAAC CGCATCTGGTTCGGTAACTAAGAATATTGAAATTTTACAGCCTGATCCAACAATTACAAAAATAATTCCGGCAGTAGCAA CTCCGGGATTTCCATTGGAAATTGAAGGAACATGGTTTTATAATATTTCATCAGTAACCTTAGGCGGAAAAGCGGTAAGT TATACTGTAAAATCATCTTCTTCTATTGTTATTGGTTTGCCTGCAAATGCCGTTTCAGGATCAGAACTTGCTATTACTAC ACCGGGTGGTACTGCAAAGAAAACAATCGACTTTGCAACGATCGTGTTGGTATCTGATTTTGACGGAAATGGAGCCAGAA CAGAATGGACTTCTTACGGCGATATAGAAAGTTTTAATACCGCTTCAACAGGCGGTCCAACAGGAAATTACACTACGTTA GCCTGGGGCGGTTCAAATGCAAATGGTTATAACGGAAGCAGTGGCGGCGGCGGAGCCAGTTTCTTAAGTGCTTCTAATAC AGATGCTACAAAAGCTTTTATCGATATTGATGTAAGTGCAAATGTTGTTGGGGCTAATTTTGCAATCCAGTTAAATACTA TCGACGGCGTAAATTATGGATATAATTTTAAAATAACCGATGTAAACTGGTCTACAAAAACCATTTCAATTGCTGATTTT AAAGATAATTACGGATTTGGATCTAATACAGCTGCAACTTTAAACCCTTCTAAAATTAACGAAATTAAAGTTGGAGTGGC TCAGGGAGATTCACCTAATCCAAGTGCCATTAAATTTGATAATATTAAAATTCGTTATCAATAA
Upstream 100 bases:
>100_bases GAAGCAATTATTTTGAACTGCCATTACCACAGTCTGCTATTGATACTAATCCATCATTATTAGAACCTCCGGTTCCATTT AACTTTAACTAACTTATACC
Downstream 100 bases:
>100_bases TTTCTCTTAAATTAAAAAGAGGCTGTGGTCAAAACAGCCTCTTTTATAAAGTAAACTATATAACCCCATTGGTATAATTA TGTTAACACATAGAAACATA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 367; Mature: 367
Protein sequence:
>367_residues MINKIKYRILILLALASFTACQNDDAVTANVEAMVAEPGDLLNQAFPQNKVRVEGNGLQGLKKITLDNTINITFNPNYNS DKSFIFTIPFDEKLGSRFGVQPITFTTASGSVTKNIEILQPDPTITKIIPAVATPGFPLEIEGTWFYNISSVTLGGKAVS YTVKSSSSIVIGLPANAVSGSELAITTPGGTAKKTIDFATIVLVSDFDGNGARTEWTSYGDIESFNTASTGGPTGNYTTL AWGGSNANGYNGSSGGGGASFLSASNTDATKAFIDIDVSANVVGANFAIQLNTIDGVNYGYNFKITDVNWSTKTISIADF KDNYGFGSNTAATLNPSKINEIKVGVAQGDSPNPSAIKFDNIKIRYQ
Sequences:
>Translated_367_residues MINKIKYRILILLALASFTACQNDDAVTANVEAMVAEPGDLLNQAFPQNKVRVEGNGLQGLKKITLDNTINITFNPNYNS DKSFIFTIPFDEKLGSRFGVQPITFTTASGSVTKNIEILQPDPTITKIIPAVATPGFPLEIEGTWFYNISSVTLGGKAVS YTVKSSSSIVIGLPANAVSGSELAITTPGGTAKKTIDFATIVLVSDFDGNGARTEWTSYGDIESFNTASTGGPTGNYTTL AWGGSNANGYNGSSGGGGASFLSASNTDATKAFIDIDVSANVVGANFAIQLNTIDGVNYGYNFKITDVNWSTKTISIADF KDNYGFGSNTAATLNPSKINEIKVGVAQGDSPNPSAIKFDNIKIRYQ >Mature_367_residues MINKIKYRILILLALASFTACQNDDAVTANVEAMVAEPGDLLNQAFPQNKVRVEGNGLQGLKKITLDNTINITFNPNYNS DKSFIFTIPFDEKLGSRFGVQPITFTTASGSVTKNIEILQPDPTITKIIPAVATPGFPLEIEGTWFYNISSVTLGGKAVS YTVKSSSSIVIGLPANAVSGSELAITTPGGTAKKTIDFATIVLVSDFDGNGARTEWTSYGDIESFNTASTGGPTGNYTTL AWGGSNANGYNGSSGGGGASFLSASNTDATKAFIDIDVSANVVGANFAIQLNTIDGVNYGYNFKITDVNWSTKTISIADF KDNYGFGSNTAATLNPSKINEIKVGVAQGDSPNPSAIKFDNIKIRYQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 38765; Mature: 38765
Theoretical pI: Translated: 4.70; Mature: 4.70
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 0.5 %Met (Translated Protein) 0.8 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 0.5 %Met (Mature Protein) 0.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MINKIKYRILILLALASFTACQNDDAVTANVEAMVAEPGDLLNQAFPQNKVRVEGNGLQG CCCCHHHHHHHHHHHHHHHCCCCCCCEEEEEEEEEECCHHHHHHHCCCCEEEEECCCCCC LKKITLDNTINITFNPNYNSDKSFIFTIPFDEKLGSRFGVQPITFTTASGSVTKNIEILQ EEEEEECCEEEEEECCCCCCCCEEEEEECCHHHHCCCCCCCEEEEEECCCCEECCEEEEC PDPTITKIIPAVATPGFPLEIEGTWFYNISSVTLGGKAVSYTVKSSSSIVIGLPANAVSG CCCCHHHHHHHHCCCCCCEEECCEEEEEEEEEEECCEEEEEEEECCCEEEEECCCCCCCC SELAITTPGGTAKKTIDFATIVLVSDFDGNGARTEWTSYGDIESFNTASTGGPTGNYTTL CEEEEECCCCCCCEEEEEEEEEEEECCCCCCCEEEECCCCCCCCCCCCCCCCCCCCEEEE AWGGSNANGYNGSSGGGGASFLSASNTDATKAFIDIDVSANVVGANFAIQLNTIDGVNYG EECCCCCCCCCCCCCCCCEEEEECCCCCCEEEEEEEEECCEEEECEEEEEEEEECCCCCC YNFKITDVNWSTKTISIADFKDNYGFGSNTAATLNPSKINEIKVGVAQGDSPNPSAIKFD CEEEEEECCCCCEEEEEEECCCCCCCCCCCEEEECCCCCCEEEEEEECCCCCCCCEEEEE NIKIRYQ EEEEEEC >Mature Secondary Structure MINKIKYRILILLALASFTACQNDDAVTANVEAMVAEPGDLLNQAFPQNKVRVEGNGLQG CCCCHHHHHHHHHHHHHHHCCCCCCCEEEEEEEEEECCHHHHHHHCCCCEEEEECCCCCC LKKITLDNTINITFNPNYNSDKSFIFTIPFDEKLGSRFGVQPITFTTASGSVTKNIEILQ EEEEEECCEEEEEECCCCCCCCEEEEEECCHHHHCCCCCCCEEEEEECCCCEECCEEEEC PDPTITKIIPAVATPGFPLEIEGTWFYNISSVTLGGKAVSYTVKSSSSIVIGLPANAVSG CCCCHHHHHHHHCCCCCCEEECCEEEEEEEEEEECCEEEEEEEECCCEEEEECCCCCCCC SELAITTPGGTAKKTIDFATIVLVSDFDGNGARTEWTSYGDIESFNTASTGGPTGNYTTL CEEEEECCCCCCCEEEEEEEEEEEECCCCCCCEEEECCCCCCCCCCCCCCCCCCCCEEEE AWGGSNANGYNGSSGGGGASFLSASNTDATKAFIDIDVSANVVGANFAIQLNTIDGVNYG EECCCCCCCCCCCCCCCCEEEEECCCCCCEEEEEEEEECCEEEECEEEEEEEEECCCCCC YNFKITDVNWSTKTISIADFKDNYGFGSNTAATLNPSKINEIKVGVAQGDSPNPSAIKFD CEEEEEECCCCCEEEEEEECCCCCCCCCCCEEEECCCCCCEEEEEEECCCCCCCCEEEEE NIKIRYQ EEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA