Definition Flavobacterium johnsoniae UW101 chromosome, complete genome.
Accession NC_009441
Length 6,096,872

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The map label for this gene is 146301597

Identifier: 146301597

GI number: 146301597

Start: 4573897

End: 4574745

Strand: Reverse

Name: 146301597

Synonym: Fjoh_3858

Alternate gene names: NA

Gene position: 4574745-4573897 (Counterclockwise)

Preceding gene: 146301598

Following gene: 146301596

Centisome position: 75.03

GC content: 33.45

Gene sequence:

>849_bases
ATGAAGTCCAAAAGAATGAAAGAAGAATGGAATGCAATACCTAACCGAGGAATACTTCCTAACGATACGCAGGCCAGAAT
GTGGAACAATATACGCAGAGTTACTATTGATAAATATAAAAAGATATACAACTGGACAGTTGCCGCTTGTGCAGTGTTTA
TTATCTCAATTGGAAGTTACCAATTCTTCAATCAGCATAAAAAAGCAGAAATTGGAATTACTTCAACGATTACTTTTAAA
AATGATATTCGGCTTATAAACCTTCCAGACGGAACCAGAGTATGGCTGAACCAAAATTCTAAAATAGAATATCCGGCACA
TTTTTTAAATACTGAAAGAAATGTGACTTTAAAAGGTGAAGCATTCTTTGAAGTAAAACGCGATCCTTCAAGGCCATTTG
TAATTACTTCCGGTACAATAAAAACAACAGTTTTAGGAACTTCATTCAATATTAAAGCTTATAATGAAAAACAGCCTGAA
GTAAATGTCAGAACCGGAAAAGTTAAAGTTGAGGGAGAAACTAATTCTGTACTGCTTTTAAGAGGTGATAAAGCTGTTTA
TACCGCAGAATCTTCTAAAGTAAAAAAAGAAAAGACCAATGTTCTGGAACCAGAATGGAAAAAAGCACTTTTGTATGTTG
ATGGTTTAACTCTGGAACAGGTTTTAGAAAAATTAAAAGAAGAAAATAATTTTGAGGTAAATTATTTAGAAGATGATTTA
AAAAACCTAACCATACAGGGTACGCTGGACAGCAGACAGGGGCTTTATGAAATGCTTCAGACTATCGCTTTTGCCTTAGA
AATAAAAATCAGATCTACTGGCAATAATACCTATTTAGTCAGCAGATAA

Upstream 100 bases:

>100_bases
CGTTAATAGTAATACTGCCCCGTGATATTTGCATAAATGGAAATCTAATGTAGTTGAATTGATATGTGTACTTAAATTTC
AATATTAAATTTTAACTCTA

Downstream 100 bases:

>100_bases
AAAGCATATCAAATTTTTACTAACGTTTTTGCCGCTTATAATTCTTTAAAAAAGTTTTATAAGCAGCCAGGGATTTCCAT
GTCCTGATTTAAAGATTTAA

Product: FecR anti-FecI sigma factor

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 282; Mature: 282

Protein sequence:

>282_residues
MKSKRMKEEWNAIPNRGILPNDTQARMWNNIRRVTIDKYKKIYNWTVAACAVFIISIGSYQFFNQHKKAEIGITSTITFK
NDIRLINLPDGTRVWLNQNSKIEYPAHFLNTERNVTLKGEAFFEVKRDPSRPFVITSGTIKTTVLGTSFNIKAYNEKQPE
VNVRTGKVKVEGETNSVLLLRGDKAVYTAESSKVKKEKTNVLEPEWKKALLYVDGLTLEQVLEKLKEENNFEVNYLEDDL
KNLTIQGTLDSRQGLYEMLQTIAFALEIKIRSTGNNTYLVSR

Sequences:

>Translated_282_residues
MKSKRMKEEWNAIPNRGILPNDTQARMWNNIRRVTIDKYKKIYNWTVAACAVFIISIGSYQFFNQHKKAEIGITSTITFK
NDIRLINLPDGTRVWLNQNSKIEYPAHFLNTERNVTLKGEAFFEVKRDPSRPFVITSGTIKTTVLGTSFNIKAYNEKQPE
VNVRTGKVKVEGETNSVLLLRGDKAVYTAESSKVKKEKTNVLEPEWKKALLYVDGLTLEQVLEKLKEENNFEVNYLEDDL
KNLTIQGTLDSRQGLYEMLQTIAFALEIKIRSTGNNTYLVSR
>Mature_282_residues
MKSKRMKEEWNAIPNRGILPNDTQARMWNNIRRVTIDKYKKIYNWTVAACAVFIISIGSYQFFNQHKKAEIGITSTITFK
NDIRLINLPDGTRVWLNQNSKIEYPAHFLNTERNVTLKGEAFFEVKRDPSRPFVITSGTIKTTVLGTSFNIKAYNEKQPE
VNVRTGKVKVEGETNSVLLLRGDKAVYTAESSKVKKEKTNVLEPEWKKALLYVDGLTLEQVLEKLKEENNFEVNYLEDDL
KNLTIQGTLDSRQGLYEMLQTIAFALEIKIRSTGNNTYLVSR

Specific function: Unknown

COG id: COG3712

COG function: function code PT; Fe2+-dicitrate sensor, membrane component

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 32451; Mature: 32451

Theoretical pI: Translated: 9.98; Mature: 9.98

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKSKRMKEEWNAIPNRGILPNDTQARMWNNIRRVTIDKYKKIYNWTVAACAVFIISIGSY
CCCCHHHHHHHCCCCCCCCCCCCHHHHHHCCEEEEHHHHHHHHHHHHHHHHHHHHHCCCC
QFFNQHKKAEIGITSTITFKNDIRLINLPDGTRVWLNQNSKIEYPAHFLNTERNVTLKGE
HHHCCCCCEEEEEEEEEEEECCEEEEECCCCCEEEECCCCCEECCHHHHCCCCCEEEECC
AFFEVKRDPSRPFVITSGTIKTTVLGTSFNIKAYNEKQPEVNVRTGKVKVEGETNSVLLL
EEEEEECCCCCCEEEECCCEEEEEEECEEEEEEECCCCCEEEEEEEEEEEECCCCEEEEE
RGDKAVYTAESSKVKKEKTNVLEPEWKKALLYVDGLTLEQVLEKLKEENNFEVNYLEDDL
ECCCEEEECCCCHHHHHHCCCCCCCCCEEEEEECCCCHHHHHHHHHHCCCEEEEEECCCC
KNLTIQGTLDSRQGLYEMLQTIAFALEIKIRSTGNNTYLVSR
CCEEEEEECCHHHHHHHHHHHHEEEEEEEEEECCCEEEEEEC
>Mature Secondary Structure
MKSKRMKEEWNAIPNRGILPNDTQARMWNNIRRVTIDKYKKIYNWTVAACAVFIISIGSY
CCCCHHHHHHHCCCCCCCCCCCCHHHHHHCCEEEEHHHHHHHHHHHHHHHHHHHHHCCCC
QFFNQHKKAEIGITSTITFKNDIRLINLPDGTRVWLNQNSKIEYPAHFLNTERNVTLKGE
HHHCCCCCEEEEEEEEEEEECCEEEEECCCCCEEEECCCCCEECCHHHHCCCCCEEEECC
AFFEVKRDPSRPFVITSGTIKTTVLGTSFNIKAYNEKQPEVNVRTGKVKVEGETNSVLLL
EEEEEECCCCCCEEEECCCEEEEEEECEEEEEEECCCCCEEEEEEEEEEEECCCCEEEEE
RGDKAVYTAESSKVKKEKTNVLEPEWKKALLYVDGLTLEQVLEKLKEENNFEVNYLEDDL
ECCCEEEECCCCHHHHHHCCCCCCCCCEEEEEECCCCHHHHHHHHHHCCCEEEEEECCCC
KNLTIQGTLDSRQGLYEMLQTIAFALEIKIRSTGNNTYLVSR
CCEEEEEECCHHHHHHHHHHHHEEEEEEEEEECCCEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA