Definition | Flavobacterium johnsoniae UW101 chromosome, complete genome. |
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Accession | NC_009441 |
Length | 6,096,872 |
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The map label for this gene is 146301570
Identifier: 146301570
GI number: 146301570
Start: 4539413
End: 4539988
Strand: Reverse
Name: 146301570
Synonym: Fjoh_3831
Alternate gene names: NA
Gene position: 4539988-4539413 (Counterclockwise)
Preceding gene: 146301572
Following gene: 146301569
Centisome position: 74.46
GC content: 34.38
Gene sequence:
>576_bases ATGAAACAATTATCCCTATTATTAATTCTTACCTGCATTTTTATCTCATGCGAAAACAGAAAAGAGCAGGAACTGCTCAA GAGAGAAAAGGCTTTAACTTTAAAGGAAGAAGAATTTGAAAAAAAAGAAGCTGACTATAAAGTATTATTAGCCATGCGAG ACAGCATCTCTGCCCTAAAAGATACTGTCAATAATGATGCTGAATTAATAACGGAATGGCCTGAGAAACTTAAAGGATTT TGGAACAGTAAGATGCTGTGCAGAGAATCAAACTGCGGCCAGTATGTTATAGGAGACCAGCGTAATGAAACTTGGGAATT TGTATCTGATTCGACAGGAATTTTTACAAATGTTTTAAATAATAAAAAGCTGGTAAGAGTATTTAAGGCAAAATACCTTA AAGACAGGATACTGCTTGAATTCAGCAGTGACAGTGTTTCTAAAAACAGAGTAAAAATGAATGTGGTTCTTGATGATATC AAAGAGAATATTATTAAAGGCACACAGACTATCACTGGACAAGAGAACTGTTCTGCCAGGTTTTCGGTTGAACTTACACT TCCTCAAAAAAAATAA
Upstream 100 bases:
>100_bases GACTGTGCAGAACTTTAATGCAGGCTTCCGTTTTTTTAGAGCCCTTTTATTTTGTAAGGCGGTATATTTTGGTTAAATTG TATATCCAAAAAAAACTTTT
Downstream 100 bases:
>100_bases TTTATGTTATTAAGTATACAGCATGTCAGTCTTCCTATTGAAGATCCGGTATTAAAATTCCTTATCGAGCTTATTATAAT TTTATGTATTCCTCTTTTAC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 191; Mature: 191
Protein sequence:
>191_residues MKQLSLLLILTCIFISCENRKEQELLKREKALTLKEEEFEKKEADYKVLLAMRDSISALKDTVNNDAELITEWPEKLKGF WNSKMLCRESNCGQYVIGDQRNETWEFVSDSTGIFTNVLNNKKLVRVFKAKYLKDRILLEFSSDSVSKNRVKMNVVLDDI KENIIKGTQTITGQENCSARFSVELTLPQKK
Sequences:
>Translated_191_residues MKQLSLLLILTCIFISCENRKEQELLKREKALTLKEEEFEKKEADYKVLLAMRDSISALKDTVNNDAELITEWPEKLKGF WNSKMLCRESNCGQYVIGDQRNETWEFVSDSTGIFTNVLNNKKLVRVFKAKYLKDRILLEFSSDSVSKNRVKMNVVLDDI KENIIKGTQTITGQENCSARFSVELTLPQKK >Mature_191_residues MKQLSLLLILTCIFISCENRKEQELLKREKALTLKEEEFEKKEADYKVLLAMRDSISALKDTVNNDAELITEWPEKLKGF WNSKMLCRESNCGQYVIGDQRNETWEFVSDSTGIFTNVLNNKKLVRVFKAKYLKDRILLEFSSDSVSKNRVKMNVVLDDI KENIIKGTQTITGQENCSARFSVELTLPQKK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 22138; Mature: 22138
Theoretical pI: Translated: 8.47; Mature: 8.47
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.6 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 4.7 %Cys+Met (Translated Protein) 2.6 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 4.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKQLSLLLILTCIFISCENRKEQELLKREKALTLKEEEFEKKEADYKVLLAMRDSISALK CCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCHHHHHHHCCCCEEEEHHHHHHHHHH DTVNNDAELITEWPEKLKGFWNSKMLCRESNCGQYVIGDQRNETWEFVSDSTGIFTNVLN HHCCCCHHHHHHHHHHHHHHCCCCEEEECCCCCCEEECCCCCCCHHHHCCCCCHHHHHHC NKKLVRVFKAKYLKDRILLEFSSDSVSKNRVKMNVVLDDIKENIIKGTQTITGQENCSAR CHHHHHHHHHHHHHHHEEEEECCCCCCCCEEEEHHHHHHHHHHHHCCCCEECCCCCCCEE FSVELTLPQKK EEEEEECCCCC >Mature Secondary Structure MKQLSLLLILTCIFISCENRKEQELLKREKALTLKEEEFEKKEADYKVLLAMRDSISALK CCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCHHHHHHHCCCCEEEEHHHHHHHHHH DTVNNDAELITEWPEKLKGFWNSKMLCRESNCGQYVIGDQRNETWEFVSDSTGIFTNVLN HHCCCCHHHHHHHHHHHHHHCCCCEEEECCCCCCEEECCCCCCCHHHHCCCCCHHHHHHC NKKLVRVFKAKYLKDRILLEFSSDSVSKNRVKMNVVLDDIKENIIKGTQTITGQENCSAR CHHHHHHHHHHHHHHHEEEEECCCCCCCCEEEEHHHHHHHHHHHHCCCCEECCCCCCCEE FSVELTLPQKK EEEEEECCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA