Definition Flavobacterium johnsoniae UW101 chromosome, complete genome.
Accession NC_009441
Length 6,096,872

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The map label for this gene is ybaL [C]

Identifier: 146301569

GI number: 146301569

Start: 4537289

End: 4539409

Strand: Reverse

Name: ybaL [C]

Synonym: Fjoh_3830

Alternate gene names: 146301569

Gene position: 4539409-4537289 (Counterclockwise)

Preceding gene: 146301570

Following gene: 146301564

Centisome position: 74.45

GC content: 37.53

Gene sequence:

>2121_bases
ATGTTATTAAGTATACAGCATGTCAGTCTTCCTATTGAAGATCCGGTATTAAAATTCCTTATCGAGCTTATTATAATTTT
ATGTATTCCTCTTTTACTCAATAAAATAAAAGTGCCGCACCTGCTGGGTCTTATTATAGCCGGTGCCGTTATTGGTCCAA
ATGGATTTAATGTTCTTGCCAGAGACAGCAGTGTAGTGGTGACAGGTACTACTGGACTGCTCTATATAATGTTTCTTGCC
GGACTTGAGATAGATATGGGCGATTTTAAAAAAAATAAATGGAAAAGTATCACTTTTTCGCTCTATACCTTTATTGTGCC
ATTTGCACTGGGGCTTGTGGGTGGTTATTACATACTCCATTTTTCGCTTTTAAGCTCGGTATTATTTGCCAGCCTTTTTT
CTTCCCATACTCTTATTGTATATCCAATGGTGAGCAAATTAGGGATAGCAAAAAAGCTTGCGGTAAATGTAACGGTAGGC
GGCACGATGATTACAGATGTACTTTCGCTTGTAGTACTGGCTGTTGTGGTGGGCATGTCACAGGGAGAAGTTGGAACTTC
CTTCTGGGTTAAGCTTTCTGTTTCCATGCTTGTATTTGCTTTAATAGTTCTGCTTCTTTTTCCTGTCTTGGCGCGCTGGT
TTTTTAAGAATGTCGAAGACAAGATTTCCCAGTATATTTTTGTTATTGTGATGATTTATCTAGCTGCTTTATTGGCAGAG
CTCGCTGGAATAGAAGCCATTATTGGAGCATTTTTTGCCGGTCTTGCGCTAAACAGGCTGATACCGCACAGTTCATCACT
TATGAACAGGGTAGAATTTGTAGGGAATGCTATTTTTATTCCATTTTTCCTGATTAGTGTTGGTATGTTGATTGATTTTA
ATGCTTTTATCCAGAGCTGGGAAACACTGGGAGTAGCTGCAGTTATGCTTACAGCTTCAATTGGAGGGAAATACGCGGCA
GCTTTTTTAACGAAAAAGACTTTTAGATTTACAAATGATGAAGGCAGTCTTATTTTCGGTATGAGTGCGGCTTCTGCGGC
AGCTACGCTTGCTTCAGTAATGGTGGGATATAATATTATCTTATCCGAAAATGAAGCAGGTGAGCCTGTCAGACTTTTAA
ATGAACATGTGCTTAATGGCAGTATTCTGCTTATACTTATTTCCTGTACTATTTCGTCATTTGTGTCAATGGCAAGCGCT
CAAAGGATTGCCGATGCAGATAAAGAAGAAACCGCGGCAGGTGCAGGTGATGAGGAAGAAAAAATTCTGCTGGCTGTAAA
TCATGAACATACAGTTGAGAAAATGGTTAATCTGGGGCTTCTCATAAAAGGCAGAAACAATAAAGACAAACTTTTTGCAC
TTAATGTCATTAACGAAGACAAAAGTGAATCATCTTCAAAAAATGCAGAAAAACTGCTGGGTGCGGCTGTAAATATAGCA
TCCTCTGCCGATGTTAAATTAAATCCGATAACCCGTCATGATAATGATGTGATTGCAGGGATTAATAATGTGGTAAAAGA
ACAGAATATTACTGATTTGATTATTGGCCTGGAAGAAGAAAAAGGATTTTCTTCATCCTTTATTTATAATCTTTATAACG
GCTACCTGCAGAACAAGAATATAAATCTGATTATTTATCATGCGGTTCAGCCGGTGTCAACCATTAAAAAATATGCTGTG
CTTATCCCTGCTGATGCTGAACTGGAACCGGGATTTTTTCATTGTTTATTAAGAATTTGGAACATCGGAAAAAATACGGG
GGCTAAAATGAGTTTTTATGCAAACCAGAAAACCATTGGTGTATTGAAGAGTATTATAGTAAAGGCAAATATTGAAGCTG
TTTTTAATCCTGTGACCTCATGGCAGGAAGCTGAAAATACTGCGGGCAGTCTGGAAGAAGACGAAGGTCTTATTATTTTA
ATGGCTGACAGGGGTATGCATTCTTATTTCCCTCAGATGAAAGAAGTGCCAGAAATTTTAAATAAAAAACTGAGCAGTAA
TAACTATATATTAATTTATCCTTTCACAAAAATTGATAATACGGTTATAGAAAAAAGAGCTGTAAGCAATCTTGATGATT
TTGCTGATATCGGAAAAATTATCGGCCGAATTTTTAAGTAG

Upstream 100 bases:

>100_bases
CAAAGAGAATATTATTAAAGGCACACAGACTATCACTGGACAAGAGAACTGTTCTGCCAGGTTTTCGGTTGAACTTACAC
TTCCTCAAAAAAAATAATTT

Downstream 100 bases:

>100_bases
AACTTGGTGTACTTCTTAGAGATTTAATGATAAAAAGTTGCTGTCTTTTTATTAAGACAGCAACTCTATTTATTTTGTGA
TTTGTCAGTTACCGGCAGTA

Product: sodium/hydrogen exchanger

Products: NA

Alternate protein names: MjNapA [H]

Number of amino acids: Translated: 706; Mature: 706

Protein sequence:

>706_residues
MLLSIQHVSLPIEDPVLKFLIELIIILCIPLLLNKIKVPHLLGLIIAGAVIGPNGFNVLARDSSVVVTGTTGLLYIMFLA
GLEIDMGDFKKNKWKSITFSLYTFIVPFALGLVGGYYILHFSLLSSVLFASLFSSHTLIVYPMVSKLGIAKKLAVNVTVG
GTMITDVLSLVVLAVVVGMSQGEVGTSFWVKLSVSMLVFALIVLLLFPVLARWFFKNVEDKISQYIFVIVMIYLAALLAE
LAGIEAIIGAFFAGLALNRLIPHSSSLMNRVEFVGNAIFIPFFLISVGMLIDFNAFIQSWETLGVAAVMLTASIGGKYAA
AFLTKKTFRFTNDEGSLIFGMSAASAAATLASVMVGYNIILSENEAGEPVRLLNEHVLNGSILLILISCTISSFVSMASA
QRIADADKEETAAGAGDEEEKILLAVNHEHTVEKMVNLGLLIKGRNNKDKLFALNVINEDKSESSSKNAEKLLGAAVNIA
SSADVKLNPITRHDNDVIAGINNVVKEQNITDLIIGLEEEKGFSSSFIYNLYNGYLQNKNINLIIYHAVQPVSTIKKYAV
LIPADAELEPGFFHCLLRIWNIGKNTGAKMSFYANQKTIGVLKSIIVKANIEAVFNPVTSWQEAENTAGSLEEDEGLIIL
MADRGMHSYFPQMKEVPEILNKKLSSNNYILIYPFTKIDNTVIEKRAVSNLDDFADIGKIIGRIFK

Sequences:

>Translated_706_residues
MLLSIQHVSLPIEDPVLKFLIELIIILCIPLLLNKIKVPHLLGLIIAGAVIGPNGFNVLARDSSVVVTGTTGLLYIMFLA
GLEIDMGDFKKNKWKSITFSLYTFIVPFALGLVGGYYILHFSLLSSVLFASLFSSHTLIVYPMVSKLGIAKKLAVNVTVG
GTMITDVLSLVVLAVVVGMSQGEVGTSFWVKLSVSMLVFALIVLLLFPVLARWFFKNVEDKISQYIFVIVMIYLAALLAE
LAGIEAIIGAFFAGLALNRLIPHSSSLMNRVEFVGNAIFIPFFLISVGMLIDFNAFIQSWETLGVAAVMLTASIGGKYAA
AFLTKKTFRFTNDEGSLIFGMSAASAAATLASVMVGYNIILSENEAGEPVRLLNEHVLNGSILLILISCTISSFVSMASA
QRIADADKEETAAGAGDEEEKILLAVNHEHTVEKMVNLGLLIKGRNNKDKLFALNVINEDKSESSSKNAEKLLGAAVNIA
SSADVKLNPITRHDNDVIAGINNVVKEQNITDLIIGLEEEKGFSSSFIYNLYNGYLQNKNINLIIYHAVQPVSTIKKYAV
LIPADAELEPGFFHCLLRIWNIGKNTGAKMSFYANQKTIGVLKSIIVKANIEAVFNPVTSWQEAENTAGSLEEDEGLIIL
MADRGMHSYFPQMKEVPEILNKKLSSNNYILIYPFTKIDNTVIEKRAVSNLDDFADIGKIIGRIFK
>Mature_706_residues
MLLSIQHVSLPIEDPVLKFLIELIIILCIPLLLNKIKVPHLLGLIIAGAVIGPNGFNVLARDSSVVVTGTTGLLYIMFLA
GLEIDMGDFKKNKWKSITFSLYTFIVPFALGLVGGYYILHFSLLSSVLFASLFSSHTLIVYPMVSKLGIAKKLAVNVTVG
GTMITDVLSLVVLAVVVGMSQGEVGTSFWVKLSVSMLVFALIVLLLFPVLARWFFKNVEDKISQYIFVIVMIYLAALLAE
LAGIEAIIGAFFAGLALNRLIPHSSSLMNRVEFVGNAIFIPFFLISVGMLIDFNAFIQSWETLGVAAVMLTASIGGKYAA
AFLTKKTFRFTNDEGSLIFGMSAASAAATLASVMVGYNIILSENEAGEPVRLLNEHVLNGSILLILISCTISSFVSMASA
QRIADADKEETAAGAGDEEEKILLAVNHEHTVEKMVNLGLLIKGRNNKDKLFALNVINEDKSESSSKNAEKLLGAAVNIA
SSADVKLNPITRHDNDVIAGINNVVKEQNITDLIIGLEEEKGFSSSFIYNLYNGYLQNKNINLIIYHAVQPVSTIKKYAV
LIPADAELEPGFFHCLLRIWNIGKNTGAKMSFYANQKTIGVLKSIIVKANIEAVFNPVTSWQEAENTAGSLEEDEGLIIL
MADRGMHSYFPQMKEVPEILNKKLSSNNYILIYPFTKIDNTVIEKRAVSNLDDFADIGKIIGRIFK

Specific function: This is probably a Na(+)/H(+) antiporter [H]

COG id: COG0475

COG function: function code P; Kef-type K+ transport systems, membrane components

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the monovalent cation:proton antiporter 1 (CPA1) transporter (TC 2.A.36) family [H]

Homologues:

Organism=Saccharomyces cerevisiae, GI6322367, Length=350, Percent_Identity=22.8571428571429, Blast_Score=83, Evalue=2e-16,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006153 [H]

Pfam domain/function: PF00999 Na_H_Exchanger [H]

EC number: NA

Molecular weight: Translated: 77095; Mature: 77095

Theoretical pI: Translated: 6.39; Mature: 6.39

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLLSIQHVSLPIEDPVLKFLIELIIILCIPLLLNKIKVPHLLGLIIAGAVIGPNGFNVLA
CEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHEECCCCCEEEE
RDSSVVVTGTTGLLYIMFLAGLEIDMGDFKKNKWKSITFSLYTFIVPFALGLVGGYYILH
ECCEEEEECCHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
FSLLSSVLFASLFSSHTLIVYPMVSKLGIAKKLAVNVTVGGTMITDVLSLVVLAVVVGMS
HHHHHHHHHHHHHCCCCEEEEECHHHHCCHHEEEEEEEECHHHHHHHHHHHHHHHHHCCC
QGEVGTSFWVKLSVSMLVFALIVLLLFPVLARWFFKNVEDKISQYIFVIVMIYLAALLAE
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LAGIEAIIGAFFAGLALNRLIPHSSSLMNRVEFVGNAIFIPFFLISVGMLIDFNAFIQSW
HHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHH
ETLGVAAVMLTASIGGKYAAAFLTKKTFRFTNDEGSLIFGMSAASAAATLASVMVGYNII
HHHHHHHHHHHHHCCCHHHHHHHHHHHEEEECCCCCEEEEECHHHHHHHHHHHHHCCEEE
LSENEAGEPVRLLNEHVLNGSILLILISCTISSFVSMASAQRIADADKEETAAGAGDEEE
EECCCCCCHHHHHHHHHCCCHHEEHHHHHHHHHHHHHHHHHHHHCCCCHHHCCCCCCCCC
KILLAVNHEHTVEKMVNLGLLIKGRNNKDKLFALNVINEDKSESSSKNAEKLLGAAVNIA
EEEEEECCHHHHHHHHCCCEEEECCCCCCCEEEEEEECCCCCCCCCCHHHHHHHHHHHCC
SSADVKLNPITRHDNDVIAGINNVVKEQNITDLIIGLEEEKGFSSSFIYNLYNGYLQNKN
CCCCEEECCCCCCCCCHHHHHHHHHHHCCCCCEEEEECCCCCCCHHHHHHHHHHHEECCC
INLIIYHAVQPVSTIKKYAVLIPADAELEPGFFHCLLRIWNIGKNTGAKMSFYANQKTIG
CCEEEEECCCCHHHHHHEEEEECCCCCCCCHHHHHHHHHHHCCCCCCCEEEEECCCHHHH
VLKSIIVKANIEAVFNPVTSWQEAENTAGSLEEDEGLIILMADRGMHSYFPQMKEVPEIL
HHHHHHHHHHHHHHHCCHHHHHHHHCCCCCCCCCCCEEEEEECCCCHHHCHHHHHHHHHH
NKKLSSNNYILIYPFTKIDNTVIEKRAVSNLDDFADIGKIIGRIFK
HHHHCCCCEEEEEECHHCCHHHHHHHHHCCCHHHHHHHHHHHHHCC
>Mature Secondary Structure
MLLSIQHVSLPIEDPVLKFLIELIIILCIPLLLNKIKVPHLLGLIIAGAVIGPNGFNVLA
CEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHEECCCCCEEEE
RDSSVVVTGTTGLLYIMFLAGLEIDMGDFKKNKWKSITFSLYTFIVPFALGLVGGYYILH
ECCEEEEECCHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
FSLLSSVLFASLFSSHTLIVYPMVSKLGIAKKLAVNVTVGGTMITDVLSLVVLAVVVGMS
HHHHHHHHHHHHHCCCCEEEEECHHHHCCHHEEEEEEEECHHHHHHHHHHHHHHHHHCCC
QGEVGTSFWVKLSVSMLVFALIVLLLFPVLARWFFKNVEDKISQYIFVIVMIYLAALLAE
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LAGIEAIIGAFFAGLALNRLIPHSSSLMNRVEFVGNAIFIPFFLISVGMLIDFNAFIQSW
HHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHH
ETLGVAAVMLTASIGGKYAAAFLTKKTFRFTNDEGSLIFGMSAASAAATLASVMVGYNII
HHHHHHHHHHHHHCCCHHHHHHHHHHHEEEECCCCCEEEEECHHHHHHHHHHHHHCCEEE
LSENEAGEPVRLLNEHVLNGSILLILISCTISSFVSMASAQRIADADKEETAAGAGDEEE
EECCCCCCHHHHHHHHHCCCHHEEHHHHHHHHHHHHHHHHHHHHCCCCHHHCCCCCCCCC
KILLAVNHEHTVEKMVNLGLLIKGRNNKDKLFALNVINEDKSESSSKNAEKLLGAAVNIA
EEEEEECCHHHHHHHHCCCEEEECCCCCCCEEEEEEECCCCCCCCCCHHHHHHHHHHHCC
SSADVKLNPITRHDNDVIAGINNVVKEQNITDLIIGLEEEKGFSSSFIYNLYNGYLQNKN
CCCCEEECCCCCCCCCHHHHHHHHHHHCCCCCEEEEECCCCCCCHHHHHHHHHHHEECCC
INLIIYHAVQPVSTIKKYAVLIPADAELEPGFFHCLLRIWNIGKNTGAKMSFYANQKTIG
CCEEEEECCCCHHHHHHEEEEECCCCCCCCHHHHHHHHHHHCCCCCCCEEEEECCCHHHH
VLKSIIVKANIEAVFNPVTSWQEAENTAGSLEEDEGLIILMADRGMHSYFPQMKEVPEIL
HHHHHHHHHHHHHHHCCHHHHHHHHCCCCCCCCCCCEEEEEECCCCHHHCHHHHHHHHHH
NKKLSSNNYILIYPFTKIDNTVIEKRAVSNLDDFADIGKIIGRIFK
HHHHCCCCEEEEEECHHCCHHHHHHHHHCCCHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]