Definition | Flavobacterium johnsoniae UW101 chromosome, complete genome. |
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Accession | NC_009441 |
Length | 6,096,872 |
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The map label for this gene is ybaL [C]
Identifier: 146301569
GI number: 146301569
Start: 4537289
End: 4539409
Strand: Reverse
Name: ybaL [C]
Synonym: Fjoh_3830
Alternate gene names: 146301569
Gene position: 4539409-4537289 (Counterclockwise)
Preceding gene: 146301570
Following gene: 146301564
Centisome position: 74.45
GC content: 37.53
Gene sequence:
>2121_bases ATGTTATTAAGTATACAGCATGTCAGTCTTCCTATTGAAGATCCGGTATTAAAATTCCTTATCGAGCTTATTATAATTTT ATGTATTCCTCTTTTACTCAATAAAATAAAAGTGCCGCACCTGCTGGGTCTTATTATAGCCGGTGCCGTTATTGGTCCAA ATGGATTTAATGTTCTTGCCAGAGACAGCAGTGTAGTGGTGACAGGTACTACTGGACTGCTCTATATAATGTTTCTTGCC GGACTTGAGATAGATATGGGCGATTTTAAAAAAAATAAATGGAAAAGTATCACTTTTTCGCTCTATACCTTTATTGTGCC ATTTGCACTGGGGCTTGTGGGTGGTTATTACATACTCCATTTTTCGCTTTTAAGCTCGGTATTATTTGCCAGCCTTTTTT CTTCCCATACTCTTATTGTATATCCAATGGTGAGCAAATTAGGGATAGCAAAAAAGCTTGCGGTAAATGTAACGGTAGGC GGCACGATGATTACAGATGTACTTTCGCTTGTAGTACTGGCTGTTGTGGTGGGCATGTCACAGGGAGAAGTTGGAACTTC CTTCTGGGTTAAGCTTTCTGTTTCCATGCTTGTATTTGCTTTAATAGTTCTGCTTCTTTTTCCTGTCTTGGCGCGCTGGT TTTTTAAGAATGTCGAAGACAAGATTTCCCAGTATATTTTTGTTATTGTGATGATTTATCTAGCTGCTTTATTGGCAGAG CTCGCTGGAATAGAAGCCATTATTGGAGCATTTTTTGCCGGTCTTGCGCTAAACAGGCTGATACCGCACAGTTCATCACT TATGAACAGGGTAGAATTTGTAGGGAATGCTATTTTTATTCCATTTTTCCTGATTAGTGTTGGTATGTTGATTGATTTTA ATGCTTTTATCCAGAGCTGGGAAACACTGGGAGTAGCTGCAGTTATGCTTACAGCTTCAATTGGAGGGAAATACGCGGCA GCTTTTTTAACGAAAAAGACTTTTAGATTTACAAATGATGAAGGCAGTCTTATTTTCGGTATGAGTGCGGCTTCTGCGGC AGCTACGCTTGCTTCAGTAATGGTGGGATATAATATTATCTTATCCGAAAATGAAGCAGGTGAGCCTGTCAGACTTTTAA ATGAACATGTGCTTAATGGCAGTATTCTGCTTATACTTATTTCCTGTACTATTTCGTCATTTGTGTCAATGGCAAGCGCT CAAAGGATTGCCGATGCAGATAAAGAAGAAACCGCGGCAGGTGCAGGTGATGAGGAAGAAAAAATTCTGCTGGCTGTAAA TCATGAACATACAGTTGAGAAAATGGTTAATCTGGGGCTTCTCATAAAAGGCAGAAACAATAAAGACAAACTTTTTGCAC TTAATGTCATTAACGAAGACAAAAGTGAATCATCTTCAAAAAATGCAGAAAAACTGCTGGGTGCGGCTGTAAATATAGCA TCCTCTGCCGATGTTAAATTAAATCCGATAACCCGTCATGATAATGATGTGATTGCAGGGATTAATAATGTGGTAAAAGA ACAGAATATTACTGATTTGATTATTGGCCTGGAAGAAGAAAAAGGATTTTCTTCATCCTTTATTTATAATCTTTATAACG GCTACCTGCAGAACAAGAATATAAATCTGATTATTTATCATGCGGTTCAGCCGGTGTCAACCATTAAAAAATATGCTGTG CTTATCCCTGCTGATGCTGAACTGGAACCGGGATTTTTTCATTGTTTATTAAGAATTTGGAACATCGGAAAAAATACGGG GGCTAAAATGAGTTTTTATGCAAACCAGAAAACCATTGGTGTATTGAAGAGTATTATAGTAAAGGCAAATATTGAAGCTG TTTTTAATCCTGTGACCTCATGGCAGGAAGCTGAAAATACTGCGGGCAGTCTGGAAGAAGACGAAGGTCTTATTATTTTA ATGGCTGACAGGGGTATGCATTCTTATTTCCCTCAGATGAAAGAAGTGCCAGAAATTTTAAATAAAAAACTGAGCAGTAA TAACTATATATTAATTTATCCTTTCACAAAAATTGATAATACGGTTATAGAAAAAAGAGCTGTAAGCAATCTTGATGATT TTGCTGATATCGGAAAAATTATCGGCCGAATTTTTAAGTAG
Upstream 100 bases:
>100_bases CAAAGAGAATATTATTAAAGGCACACAGACTATCACTGGACAAGAGAACTGTTCTGCCAGGTTTTCGGTTGAACTTACAC TTCCTCAAAAAAAATAATTT
Downstream 100 bases:
>100_bases AACTTGGTGTACTTCTTAGAGATTTAATGATAAAAAGTTGCTGTCTTTTTATTAAGACAGCAACTCTATTTATTTTGTGA TTTGTCAGTTACCGGCAGTA
Product: sodium/hydrogen exchanger
Products: NA
Alternate protein names: MjNapA [H]
Number of amino acids: Translated: 706; Mature: 706
Protein sequence:
>706_residues MLLSIQHVSLPIEDPVLKFLIELIIILCIPLLLNKIKVPHLLGLIIAGAVIGPNGFNVLARDSSVVVTGTTGLLYIMFLA GLEIDMGDFKKNKWKSITFSLYTFIVPFALGLVGGYYILHFSLLSSVLFASLFSSHTLIVYPMVSKLGIAKKLAVNVTVG GTMITDVLSLVVLAVVVGMSQGEVGTSFWVKLSVSMLVFALIVLLLFPVLARWFFKNVEDKISQYIFVIVMIYLAALLAE LAGIEAIIGAFFAGLALNRLIPHSSSLMNRVEFVGNAIFIPFFLISVGMLIDFNAFIQSWETLGVAAVMLTASIGGKYAA AFLTKKTFRFTNDEGSLIFGMSAASAAATLASVMVGYNIILSENEAGEPVRLLNEHVLNGSILLILISCTISSFVSMASA QRIADADKEETAAGAGDEEEKILLAVNHEHTVEKMVNLGLLIKGRNNKDKLFALNVINEDKSESSSKNAEKLLGAAVNIA SSADVKLNPITRHDNDVIAGINNVVKEQNITDLIIGLEEEKGFSSSFIYNLYNGYLQNKNINLIIYHAVQPVSTIKKYAV LIPADAELEPGFFHCLLRIWNIGKNTGAKMSFYANQKTIGVLKSIIVKANIEAVFNPVTSWQEAENTAGSLEEDEGLIIL MADRGMHSYFPQMKEVPEILNKKLSSNNYILIYPFTKIDNTVIEKRAVSNLDDFADIGKIIGRIFK
Sequences:
>Translated_706_residues MLLSIQHVSLPIEDPVLKFLIELIIILCIPLLLNKIKVPHLLGLIIAGAVIGPNGFNVLARDSSVVVTGTTGLLYIMFLA GLEIDMGDFKKNKWKSITFSLYTFIVPFALGLVGGYYILHFSLLSSVLFASLFSSHTLIVYPMVSKLGIAKKLAVNVTVG GTMITDVLSLVVLAVVVGMSQGEVGTSFWVKLSVSMLVFALIVLLLFPVLARWFFKNVEDKISQYIFVIVMIYLAALLAE LAGIEAIIGAFFAGLALNRLIPHSSSLMNRVEFVGNAIFIPFFLISVGMLIDFNAFIQSWETLGVAAVMLTASIGGKYAA AFLTKKTFRFTNDEGSLIFGMSAASAAATLASVMVGYNIILSENEAGEPVRLLNEHVLNGSILLILISCTISSFVSMASA QRIADADKEETAAGAGDEEEKILLAVNHEHTVEKMVNLGLLIKGRNNKDKLFALNVINEDKSESSSKNAEKLLGAAVNIA SSADVKLNPITRHDNDVIAGINNVVKEQNITDLIIGLEEEKGFSSSFIYNLYNGYLQNKNINLIIYHAVQPVSTIKKYAV LIPADAELEPGFFHCLLRIWNIGKNTGAKMSFYANQKTIGVLKSIIVKANIEAVFNPVTSWQEAENTAGSLEEDEGLIIL MADRGMHSYFPQMKEVPEILNKKLSSNNYILIYPFTKIDNTVIEKRAVSNLDDFADIGKIIGRIFK >Mature_706_residues MLLSIQHVSLPIEDPVLKFLIELIIILCIPLLLNKIKVPHLLGLIIAGAVIGPNGFNVLARDSSVVVTGTTGLLYIMFLA GLEIDMGDFKKNKWKSITFSLYTFIVPFALGLVGGYYILHFSLLSSVLFASLFSSHTLIVYPMVSKLGIAKKLAVNVTVG GTMITDVLSLVVLAVVVGMSQGEVGTSFWVKLSVSMLVFALIVLLLFPVLARWFFKNVEDKISQYIFVIVMIYLAALLAE LAGIEAIIGAFFAGLALNRLIPHSSSLMNRVEFVGNAIFIPFFLISVGMLIDFNAFIQSWETLGVAAVMLTASIGGKYAA AFLTKKTFRFTNDEGSLIFGMSAASAAATLASVMVGYNIILSENEAGEPVRLLNEHVLNGSILLILISCTISSFVSMASA QRIADADKEETAAGAGDEEEKILLAVNHEHTVEKMVNLGLLIKGRNNKDKLFALNVINEDKSESSSKNAEKLLGAAVNIA SSADVKLNPITRHDNDVIAGINNVVKEQNITDLIIGLEEEKGFSSSFIYNLYNGYLQNKNINLIIYHAVQPVSTIKKYAV LIPADAELEPGFFHCLLRIWNIGKNTGAKMSFYANQKTIGVLKSIIVKANIEAVFNPVTSWQEAENTAGSLEEDEGLIIL MADRGMHSYFPQMKEVPEILNKKLSSNNYILIYPFTKIDNTVIEKRAVSNLDDFADIGKIIGRIFK
Specific function: This is probably a Na(+)/H(+) antiporter [H]
COG id: COG0475
COG function: function code P; Kef-type K+ transport systems, membrane components
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the monovalent cation:proton antiporter 1 (CPA1) transporter (TC 2.A.36) family [H]
Homologues:
Organism=Saccharomyces cerevisiae, GI6322367, Length=350, Percent_Identity=22.8571428571429, Blast_Score=83, Evalue=2e-16,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR006153 [H]
Pfam domain/function: PF00999 Na_H_Exchanger [H]
EC number: NA
Molecular weight: Translated: 77095; Mature: 77095
Theoretical pI: Translated: 6.39; Mature: 6.39
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLLSIQHVSLPIEDPVLKFLIELIIILCIPLLLNKIKVPHLLGLIIAGAVIGPNGFNVLA CEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHEECCCCCEEEE RDSSVVVTGTTGLLYIMFLAGLEIDMGDFKKNKWKSITFSLYTFIVPFALGLVGGYYILH ECCEEEEECCHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH FSLLSSVLFASLFSSHTLIVYPMVSKLGIAKKLAVNVTVGGTMITDVLSLVVLAVVVGMS HHHHHHHHHHHHHCCCCEEEEECHHHHCCHHEEEEEEEECHHHHHHHHHHHHHHHHHCCC QGEVGTSFWVKLSVSMLVFALIVLLLFPVLARWFFKNVEDKISQYIFVIVMIYLAALLAE CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LAGIEAIIGAFFAGLALNRLIPHSSSLMNRVEFVGNAIFIPFFLISVGMLIDFNAFIQSW HHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHH ETLGVAAVMLTASIGGKYAAAFLTKKTFRFTNDEGSLIFGMSAASAAATLASVMVGYNII HHHHHHHHHHHHHCCCHHHHHHHHHHHEEEECCCCCEEEEECHHHHHHHHHHHHHCCEEE LSENEAGEPVRLLNEHVLNGSILLILISCTISSFVSMASAQRIADADKEETAAGAGDEEE EECCCCCCHHHHHHHHHCCCHHEEHHHHHHHHHHHHHHHHHHHHCCCCHHHCCCCCCCCC KILLAVNHEHTVEKMVNLGLLIKGRNNKDKLFALNVINEDKSESSSKNAEKLLGAAVNIA EEEEEECCHHHHHHHHCCCEEEECCCCCCCEEEEEEECCCCCCCCCCHHHHHHHHHHHCC SSADVKLNPITRHDNDVIAGINNVVKEQNITDLIIGLEEEKGFSSSFIYNLYNGYLQNKN CCCCEEECCCCCCCCCHHHHHHHHHHHCCCCCEEEEECCCCCCCHHHHHHHHHHHEECCC INLIIYHAVQPVSTIKKYAVLIPADAELEPGFFHCLLRIWNIGKNTGAKMSFYANQKTIG CCEEEEECCCCHHHHHHEEEEECCCCCCCCHHHHHHHHHHHCCCCCCCEEEEECCCHHHH VLKSIIVKANIEAVFNPVTSWQEAENTAGSLEEDEGLIILMADRGMHSYFPQMKEVPEIL HHHHHHHHHHHHHHHCCHHHHHHHHCCCCCCCCCCCEEEEEECCCCHHHCHHHHHHHHHH NKKLSSNNYILIYPFTKIDNTVIEKRAVSNLDDFADIGKIIGRIFK HHHHCCCCEEEEEECHHCCHHHHHHHHHCCCHHHHHHHHHHHHHCC >Mature Secondary Structure MLLSIQHVSLPIEDPVLKFLIELIIILCIPLLLNKIKVPHLLGLIIAGAVIGPNGFNVLA CEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHEECCCCCEEEE RDSSVVVTGTTGLLYIMFLAGLEIDMGDFKKNKWKSITFSLYTFIVPFALGLVGGYYILH ECCEEEEECCHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH FSLLSSVLFASLFSSHTLIVYPMVSKLGIAKKLAVNVTVGGTMITDVLSLVVLAVVVGMS HHHHHHHHHHHHHCCCCEEEEECHHHHCCHHEEEEEEEECHHHHHHHHHHHHHHHHHCCC QGEVGTSFWVKLSVSMLVFALIVLLLFPVLARWFFKNVEDKISQYIFVIVMIYLAALLAE CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LAGIEAIIGAFFAGLALNRLIPHSSSLMNRVEFVGNAIFIPFFLISVGMLIDFNAFIQSW HHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHH ETLGVAAVMLTASIGGKYAAAFLTKKTFRFTNDEGSLIFGMSAASAAATLASVMVGYNII HHHHHHHHHHHHHCCCHHHHHHHHHHHEEEECCCCCEEEEECHHHHHHHHHHHHHCCEEE LSENEAGEPVRLLNEHVLNGSILLILISCTISSFVSMASAQRIADADKEETAAGAGDEEE EECCCCCCHHHHHHHHHCCCHHEEHHHHHHHHHHHHHHHHHHHHCCCCHHHCCCCCCCCC KILLAVNHEHTVEKMVNLGLLIKGRNNKDKLFALNVINEDKSESSSKNAEKLLGAAVNIA EEEEEECCHHHHHHHHCCCEEEECCCCCCCEEEEEEECCCCCCCCCCHHHHHHHHHHHCC SSADVKLNPITRHDNDVIAGINNVVKEQNITDLIIGLEEEKGFSSSFIYNLYNGYLQNKN CCCCEEECCCCCCCCCHHHHHHHHHHHCCCCCEEEEECCCCCCCHHHHHHHHHHHEECCC INLIIYHAVQPVSTIKKYAVLIPADAELEPGFFHCLLRIWNIGKNTGAKMSFYANQKTIG CCEEEEECCCCHHHHHHEEEEECCCCCCCCHHHHHHHHHHHCCCCCCCEEEEECCCHHHH VLKSIIVKANIEAVFNPVTSWQEAENTAGSLEEDEGLIILMADRGMHSYFPQMKEVPEIL HHHHHHHHHHHHHHHCCHHHHHHHHCCCCCCCCCCCEEEEEECCCCHHHCHHHHHHHHHH NKKLSSNNYILIYPFTKIDNTVIEKRAVSNLDDFADIGKIIGRIFK HHHHCCCCEEEEEECHHCCHHHHHHHHHCCCHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 8688087 [H]