Definition | Flavobacterium johnsoniae UW101 chromosome, complete genome. |
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Accession | NC_009441 |
Length | 6,096,872 |
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The map label for this gene is 146301557
Identifier: 146301557
GI number: 146301557
Start: 4524974
End: 4525804
Strand: Reverse
Name: 146301557
Synonym: Fjoh_3818
Alternate gene names: NA
Gene position: 4525804-4524974 (Counterclockwise)
Preceding gene: 146301559
Following gene: 146301554
Centisome position: 74.23
GC content: 36.46
Gene sequence:
>831_bases ATGAAAAAACATTTCACCTCACCAAAATATTTTTTTATGCTATGGATTTTGCTGCTAGCTTCAAATCCTGTTCAATGTAA TGTTTCGCCTGTAAGCATCGGATTTTTTAATTTTAAAAAAAGTCCTTCTTCAAAGACATTTGCCCCGCCGGAAGAAGAGA AACACCGCGTTTGGCTTAATTTAACTAATGATCAGGGGCTTTTCAAACAAATTTTGATTGGTTATATACCCGGAGCGACA AATGGATGGGATCATAATTATGATGCTCTGACCATGGATGCTAATAAATATGCTGATTTTTACAGCATTAATGAAGATAG AAAGCTGGTTATTCAGGGACGGGCAGTTCCATTTAACCCTGCAGATACTATACCTTTGGGCTATAGATCCACTATCATGG GTAATCTTAAGATATCTATTGATCATGCAGATGGTAATTTAACGGATGCGGATATTTATCTGCAGGATAATCAGACTGGT ATTACGCATAATTTGAAATCCGGTCCTTATACATTTTCAACCCTTACTGGGACCTTTACTGATCGCTTTGTAATTAAATA CGCCGGTAAAAACCTGGGAGTAAATGAATCTAAAACAATTGCCGATACCTTTACAGTTGTTTCTAAAGGTAAGAGCATTA TTTTGAGATCAACTGATAAAACGCTTCGAGAAGTCAATGTTTTTGATATAACCGGAAAATTGCTCTATAGTAATCAGAAA ATTGGAGACCGCCAATTAGAGATTCACAGTATTTGCTCCGGCACTCAAGTCTTAGTAGTTAAAACTACATTGGAGAATGG AGACATAATAGCCAGAAAAGTGCTCTTCTGA
Upstream 100 bases:
>100_bases GAACATTTAGAATGTTCATGATTTTCTATTGATGTTATTTAAATTTTAGAGAAAGTGTGCGCCGGCGCGTAATCCTTTAA TAATTTTTAAATCAACACCT
Downstream 100 bases:
>100_bases TCTTTATAACGTAAAAAATAACCCGCAGCTATCGTTTGAGATACTGCGGGCTTTTTTATAAGATATGATTTGAAAATTAA AATCCGACTAAGCTTTTGCA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 276; Mature: 276
Protein sequence:
>276_residues MKKHFTSPKYFFMLWILLLASNPVQCNVSPVSIGFFNFKKSPSSKTFAPPEEEKHRVWLNLTNDQGLFKQILIGYIPGAT NGWDHNYDALTMDANKYADFYSINEDRKLVIQGRAVPFNPADTIPLGYRSTIMGNLKISIDHADGNLTDADIYLQDNQTG ITHNLKSGPYTFSTLTGTFTDRFVIKYAGKNLGVNESKTIADTFTVVSKGKSIILRSTDKTLREVNVFDITGKLLYSNQK IGDRQLEIHSICSGTQVLVVKTTLENGDIIARKVLF
Sequences:
>Translated_276_residues MKKHFTSPKYFFMLWILLLASNPVQCNVSPVSIGFFNFKKSPSSKTFAPPEEEKHRVWLNLTNDQGLFKQILIGYIPGAT NGWDHNYDALTMDANKYADFYSINEDRKLVIQGRAVPFNPADTIPLGYRSTIMGNLKISIDHADGNLTDADIYLQDNQTG ITHNLKSGPYTFSTLTGTFTDRFVIKYAGKNLGVNESKTIADTFTVVSKGKSIILRSTDKTLREVNVFDITGKLLYSNQK IGDRQLEIHSICSGTQVLVVKTTLENGDIIARKVLF >Mature_276_residues MKKHFTSPKYFFMLWILLLASNPVQCNVSPVSIGFFNFKKSPSSKTFAPPEEEKHRVWLNLTNDQGLFKQILIGYIPGAT NGWDHNYDALTMDANKYADFYSINEDRKLVIQGRAVPFNPADTIPLGYRSTIMGNLKISIDHADGNLTDADIYLQDNQTG ITHNLKSGPYTFSTLTGTFTDRFVIKYAGKNLGVNESKTIADTFTVVSKGKSIILRSTDKTLREVNVFDITGKLLYSNQK IGDRQLEIHSICSGTQVLVVKTTLENGDIIARKVLF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 30944; Mature: 30944
Theoretical pI: Translated: 9.38; Mature: 9.38
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKHFTSPKYFFMLWILLLASNPVQCNVSPVSIGFFNFKKSPSSKTFAPPEEEKHRVWLN CCCCCCCCHHHHHHHHHHHCCCCCEEECEEEEEEEEEECCCCCCCCCCCCCCCCCEEEEE LTNDQGLFKQILIGYIPGATNGWDHNYDALTMDANKYADFYSINEDRKLVIQGRAVPFNP EECCCCHHHHHHHHCCCCCCCCCCCCCCEEEECCCCCCCEEEECCCCEEEEECCCCCCCC ADTIPLGYRSTIMGNLKISIDHADGNLTDADIYLQDNQTGITHNLKSGPYTFSTLTGTFT CCCCCCCCHHEEEEEEEEEEECCCCCEEEEEEEEECCCCCCEEECCCCCEEEEEEEECCC DRFVIKYAGKNLGVNESKTIADTFTVVSKGKSIILRSTDKTLREVNVFDITGKLLYSNQK CEEEEEECCCCCCCCCCCCHHHHHEEECCCCEEEEECCCCHHHEEEEEEEEEEEEECCCC IGDRQLEIHSICSGTQVLVVKTTLENGDIIARKVLF CCCCEEEEEECCCCCEEEEEEEECCCCCEEEEEECC >Mature Secondary Structure MKKHFTSPKYFFMLWILLLASNPVQCNVSPVSIGFFNFKKSPSSKTFAPPEEEKHRVWLN CCCCCCCCHHHHHHHHHHHCCCCCEEECEEEEEEEEEECCCCCCCCCCCCCCCCCEEEEE LTNDQGLFKQILIGYIPGATNGWDHNYDALTMDANKYADFYSINEDRKLVIQGRAVPFNP EECCCCHHHHHHHHCCCCCCCCCCCCCCEEEECCCCCCCEEEECCCCEEEEECCCCCCCC ADTIPLGYRSTIMGNLKISIDHADGNLTDADIYLQDNQTGITHNLKSGPYTFSTLTGTFT CCCCCCCCHHEEEEEEEEEEECCCCCEEEEEEEEECCCCCCEEECCCCCEEEEEEEECCC DRFVIKYAGKNLGVNESKTIADTFTVVSKGKSIILRSTDKTLREVNVFDITGKLLYSNQK CEEEEEECCCCCCCCCCCCHHHHHEEECCCCEEEEECCCCHHHEEEEEEEEEEEEECCCC IGDRQLEIHSICSGTQVLVVKTTLENGDIIARKVLF CCCCEEEEEECCCCCEEEEEEEECCCCCEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA