Definition | Flavobacterium johnsoniae UW101 chromosome, complete genome. |
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Accession | NC_009441 |
Length | 6,096,872 |
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The map label for this gene is flp [H]
Identifier: 146301556
GI number: 146301556
Start: 4523731
End: 4524825
Strand: Direct
Name: flp [H]
Synonym: Fjoh_3817
Alternate gene names: 146301556
Gene position: 4523731-4524825 (Clockwise)
Preceding gene: 146301555
Following gene: 146301558
Centisome position: 74.2
GC content: 35.07
Gene sequence:
>1095_bases ATGAGAAATATTTTTTTTATTTTACTGCTATCATTTTTTTCATTTAATCTGGTTTTGTCCCAGCATAAAAAAACAGAAAT CATCAATTGTCTCAAAAAAGAAATGGAGGACAAAAAAATTCCAGGATGCCAGCTGATAGTGCTGAAAGATGATAAAATTG TGCTGTCTCAAGCTATTGGAACCGCTTACCTGCCATTTTCGGTACCTGTCAGAAAGAATACTGTTTTTTCAATAAATTCA ATCTCTAAAGTTTTTACTTCAGTTGCTGTGATGCAATTACAGAACCAGAACAAACTCAATATTAATGACCGCATTTCCAT CTATATGGATTCAATTCCTGAAAACTGGAAAAAAATAACTATTAAACAATTGATGAGCCACACATCGGGGCTTCCGGACA TTGAAGATGAGAAAGGCTTAATTGGAGATAAGGGGCAGGATTCAGCGTGGCTGAAAGTAAAAAAATTACCATTACTATCA GAAGCTGGGGAGCAGTTTAATTATAATGCGACTAACTATTATATATTACAGCGGATTATTGAAAAATGCAGTGGTGAACC ATTTGAAAAGTTTGTCCGAAAAAATCAGTTTGATATCTTAGGAATCAAACAAATATTCTACGGAAACTCTTATGATGTAA TTAAAAATAAATGCCCGACTTACAGCTATTATAGTCAAGACAAAACAACGGGTGAATATATCAAGGGAGTAAAATTAAAG GAGACTTATGAAGAATTTCCATCAAAAATGATAACCGATGCAGGTGCATTTACAACAGCTGAAGAAATGGCAAAATGGAT AATCGGACTTCAAACGGGTAAACTCCTTAACAATAATAAAGATATAGCTGCCATTTGGGAACCGGTAAAATTGAAAAATG GTTCTTATGACGGCTTTGGCGGACTTTTAAATGCTTATGCTTTAGGATGGCCGGTAATTACAAGGAAAAACCATTTTGCA GTTGCCTCTATTGGCGGTGGCCGCGCCGCTTTTATTATTTACCCTGAAGATAAACTTGCCATCATTCTTTTTACAAATCT GACGGGTGCTGGTCCAGAAGAAATTATCGAAAAACTAGCAGATTTTTATTTCTGA
Upstream 100 bases:
>100_bases AAATTTAACAACTTAGGGATACAGCCGCTTCAGTGGCAGCTGATTAGATTTACACTCGATATACGTTAATATTTTTAACT TTGAGAAACTTAACAATCCG
Downstream 100 bases:
>100_bases ATAGTTAATTTCATCATTAATCCATGCTGGAGCTCTACCTAATTCTTCTGCAAAAGCTTAGTCGGATTTTAATTTTCAAA TCATATCTTATAAAAAAGCC
Product: beta-lactamase
Products: NA
Alternate protein names: FmtA-like protein [H]
Number of amino acids: Translated: 364; Mature: 364
Protein sequence:
>364_residues MRNIFFILLLSFFSFNLVLSQHKKTEIINCLKKEMEDKKIPGCQLIVLKDDKIVLSQAIGTAYLPFSVPVRKNTVFSINS ISKVFTSVAVMQLQNQNKLNINDRISIYMDSIPENWKKITIKQLMSHTSGLPDIEDEKGLIGDKGQDSAWLKVKKLPLLS EAGEQFNYNATNYYILQRIIEKCSGEPFEKFVRKNQFDILGIKQIFYGNSYDVIKNKCPTYSYYSQDKTTGEYIKGVKLK ETYEEFPSKMITDAGAFTTAEEMAKWIIGLQTGKLLNNNKDIAAIWEPVKLKNGSYDGFGGLLNAYALGWPVITRKNHFA VASIGGGRAAFIIYPEDKLAIILFTNLTGAGPEEIIEKLADFYF
Sequences:
>Translated_364_residues MRNIFFILLLSFFSFNLVLSQHKKTEIINCLKKEMEDKKIPGCQLIVLKDDKIVLSQAIGTAYLPFSVPVRKNTVFSINS ISKVFTSVAVMQLQNQNKLNINDRISIYMDSIPENWKKITIKQLMSHTSGLPDIEDEKGLIGDKGQDSAWLKVKKLPLLS EAGEQFNYNATNYYILQRIIEKCSGEPFEKFVRKNQFDILGIKQIFYGNSYDVIKNKCPTYSYYSQDKTTGEYIKGVKLK ETYEEFPSKMITDAGAFTTAEEMAKWIIGLQTGKLLNNNKDIAAIWEPVKLKNGSYDGFGGLLNAYALGWPVITRKNHFA VASIGGGRAAFIIYPEDKLAIILFTNLTGAGPEEIIEKLADFYF >Mature_364_residues MRNIFFILLLSFFSFNLVLSQHKKTEIINCLKKEMEDKKIPGCQLIVLKDDKIVLSQAIGTAYLPFSVPVRKNTVFSINS ISKVFTSVAVMQLQNQNKLNINDRISIYMDSIPENWKKITIKQLMSHTSGLPDIEDEKGLIGDKGQDSAWLKVKKLPLLS EAGEQFNYNATNYYILQRIIEKCSGEPFEKFVRKNQFDILGIKQIFYGNSYDVIKNKCPTYSYYSQDKTTGEYIKGVKLK ETYEEFPSKMITDAGAFTTAEEMAKWIIGLQTGKLLNNNKDIAAIWEPVKLKNGSYDGFGGLLNAYALGWPVITRKNHFA VASIGGGRAAFIIYPEDKLAIILFTNLTGAGPEEIIEKLADFYF
Specific function: Its precise function is unknown. Has no penicillin- binding activity and is not involved in methicillin resistance [H]
COG id: COG1680
COG function: function code V; Beta-lactamase class C and other penicillin binding proteins
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI87082101, Length=193, Percent_Identity=26.4248704663212, Blast_Score=66, Evalue=3e-12, Organism=Caenorhabditis elegans, GI17550934, Length=313, Percent_Identity=23.6421725239617, Blast_Score=69, Evalue=6e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR012338 - InterPro: IPR001466 [H]
Pfam domain/function: PF00144 Beta-lactamase [H]
EC number: NA
Molecular weight: Translated: 41223; Mature: 41223
Theoretical pI: Translated: 9.08; Mature: 9.08
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRNIFFILLLSFFSFNLVLSQHKKTEIINCLKKEMEDKKIPGCQLIVLKDDKIVLSQAIG CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCEEEHHHCC TAYLPFSVPVRKNTVFSINSISKVFTSVAVMQLQNQNKLNINDRISIYMDSIPENWKKIT CEECCEECCCCCCEEEEHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEECCCCCHHHHHH IKQLMSHTSGLPDIEDEKGLIGDKGQDSAWLKVKKLPLLSEAGEQFNYNATNYYILQRII HHHHHHHHCCCCCCCCCCCCCCCCCCCCCEEEEECCCCHHHCCCCCCCCCHHHHHHHHHH EKCSGEPFEKFVRKNQFDILGIKQIFYGNSYDVIKNKCPTYSYYSQDKTTGEYIKGVKLK HHHCCCHHHHHHHCCCCCEEEEHHHHCCCCHHHHHCCCCCCCCCCCCCCCHHHHCCCCHH ETYEEFPSKMITDAGAFTTAEEMAKWIIGLQTGKLLNNNKDIAAIWEPVKLKNGSYDGFG HHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCCHHCCCCCEEEEECCEEECCCCCCCHH GLLNAYALGWPVITRKNHFAVASIGGGRAAFIIYPEDKLAIILFTNLTGAGPEEIIEKLA HHHHHHHHCCCEEECCCCEEEEEECCCEEEEEEECCCCEEEEEEECCCCCCHHHHHHHHH DFYF HHCC >Mature Secondary Structure MRNIFFILLLSFFSFNLVLSQHKKTEIINCLKKEMEDKKIPGCQLIVLKDDKIVLSQAIG CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCEEEHHHCC TAYLPFSVPVRKNTVFSINSISKVFTSVAVMQLQNQNKLNINDRISIYMDSIPENWKKIT CEECCEECCCCCCEEEEHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEECCCCCHHHHHH IKQLMSHTSGLPDIEDEKGLIGDKGQDSAWLKVKKLPLLSEAGEQFNYNATNYYILQRII HHHHHHHHCCCCCCCCCCCCCCCCCCCCCEEEEECCCCHHHCCCCCCCCCHHHHHHHHHH EKCSGEPFEKFVRKNQFDILGIKQIFYGNSYDVIKNKCPTYSYYSQDKTTGEYIKGVKLK HHHCCCHHHHHHHCCCCCEEEEHHHHCCCCHHHHHCCCCCCCCCCCCCCCHHHHCCCCHH ETYEEFPSKMITDAGAFTTAEEMAKWIIGLQTGKLLNNNKDIAAIWEPVKLKNGSYDGFG HHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCCHHCCCCCEEEEECCEEECCCCCCCHH GLLNAYALGWPVITRKNHFAVASIGGGRAAFIIYPEDKLAIILFTNLTGAGPEEIIEKLA HHHHHHHHCCCEEECCCCEEEEEECCCEEEEEEECCCCEEEEEEECCCCCCHHHHHHHHH DFYF HHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: NA